RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 TAF9Q16594 264 aa16.8■□□□□ 0.28
VPS28-206ENST00000526734 OR2G6Q5TZ20 316 aa16.8■□□□□ 0.28
VPS28-206ENST00000526734 OR5D18Q8NGL1 313 aa16.8■□□□□ 0.28
VPS28-206ENST00000526734 FOXRED1Q96CU9 486 aaPredicted RBP16.8■□□□□ 0.28
VPS28-206ENST00000526734 SPACA5Q96QH8 159 aa16.8■□□□□ 0.28
VPS28-206ENST00000526734 MEGF9Q9H1U4 602 aa16.8■□□□□ 0.28
VPS28-206ENST00000526734 IL36RNQ9UBH0 155 aa16.8■□□□□ 0.28
VPS28-206ENST00000526734 GSTK1Q9Y2Q3 226 aa16.8■□□□□ 0.28
VPS28-206ENST00000526734 CLPSL1A2RUU4 121 aa16.79■□□□□ 0.28
VPS28-206ENST00000526734 PSPNO60542 156 aa16.79■□□□□ 0.28
VPS28-206ENST00000526734 OMGP23515 440 aa16.79■□□□□ 0.28
VPS28-206ENST00000526734 TGFBR2P37173 567 aa16.79■□□□□ 0.28
VPS28-206ENST00000526734 P2RX3P56373 397 aa16.79■□□□□ 0.28
VPS28-206ENST00000526734 OLFML2AQ68BL7 652 aa16.79■□□□□ 0.28
VPS28-206ENST00000526734 DHRS7BQ6IAN0 325 aaPredicted RBP16.79■□□□□ 0.28
VPS28-206ENST00000526734 OR52N4Q8NGI2 321 aa16.79■□□□□ 0.28
VPS28-206ENST00000526734 RGP1Q92546 391 aaPredicted RBP16.79■□□□□ 0.28
VPS28-206ENST00000526734 TMEM106AQ96A25 262 aa16.79■□□□□ 0.28
VPS28-206ENST00000526734 PLCXD1Q9NUJ7 323 aa16.79■□□□□ 0.28
VPS28-206ENST00000526734 ZNF281Q9Y2X9 895 aa16.79■□□□□ 0.28
VPS28-206ENST00000526734 UBE2J1Q9Y385 318 aaPredicted RBP16.79■□□□□ 0.28
VPS28-206ENST00000526734 TBL2Q9Y4P3 447 aaKnown RBP16.79■□□□□ 0.28
VPS28-206ENST00000526734 OR2H2O95918 312 aa16.78■□□□□ 0.28
VPS28-206ENST00000526734 ALDOBP05062 364 aa16.78■□□□□ 0.28
VPS28-206ENST00000526734 CSN2P05814 226 aa16.78■□□□□ 0.28
VPS28-206ENST00000526734 IGHV1-8P0DP01 117 aa16.78■□□□□ 0.28
VPS28-206ENST00000526734 COX7A1P24310 79 aa16.78■□□□□ 0.28
VPS28-206ENST00000526734 DUSP1P28562 367 aa16.78■□□□□ 0.28
VPS28-206ENST00000526734 OR3A1P47881 315 aa16.78■□□□□ 0.28
VPS28-206ENST00000526734 SOX2P48431 317 aa16.78■□□□□ 0.28
VPS28-206ENST00000526734 PPP3R1P63098 170 aa16.78■□□□□ 0.28
VPS28-206ENST00000526734 RELBQ01201 579 aa16.78■□□□□ 0.28
VPS28-206ENST00000526734 ST3GAL4Q11206 333 aa16.78■□□□□ 0.28
VPS28-206ENST00000526734 LRRC75BQ2VPJ9 315 aa16.78■□□□□ 0.28
VPS28-206ENST00000526734 XAF1Q6GPH4 301 aa16.78■□□□□ 0.28
VPS28-206ENST00000526734 ELP2Q6IA86 826 aa16.78■□□□□ 0.28
VPS28-206ENST00000526734 CRIP3Q6Q6R5 217 aa16.78■□□□□ 0.28
VPS28-206ENST00000526734 OR4S1Q8NGB4 309 aa16.78■□□□□ 0.28
VPS28-206ENST00000526734 FBLIM1Q8WUP2 373 aa16.78■□□□□ 0.28
VPS28-206ENST00000526734 GGHQ92820 318 aa16.78■□□□□ 0.28
VPS28-206ENST00000526734 GPER1Q99527 375 aa16.78■□□□□ 0.28
VPS28-206ENST00000526734 CHST6Q9GZX3 395 aa16.78■□□□□ 0.28
VPS28-206ENST00000526734 SIRPB1O00241 398 aa16.77■□□□□ 0.28
VPS28-206ENST00000526734 ZNF44P15621 663 aa16.77■□□□□ 0.28
VPS28-206ENST00000526734 SNU13P55769 128 aaKnown RBP16.77■□□□□ 0.28
VPS28-206ENST00000526734 YIF1BQ5BJH7 314 aa16.77■□□□□ 0.28
VPS28-206ENST00000526734 DMKNQ6E0U4 476 aaPredicted RBP16.77■□□□□ 0.28
VPS28-206ENST00000526734 ZNF782Q6ZMW2 699 aaPredicted RBP16.77■□□□□ 0.28
VPS28-206ENST00000526734 LIAT1Q6ZQX7 453 aa16.77■□□□□ 0.28
VPS28-206ENST00000526734 TCF23Q7RTU1 214 aa16.77■□□□□ 0.28
VPS28-206ENST00000526734 DTX3Q8N9I9 347 aa16.77■□□□□ 0.28
VPS28-206ENST00000526734 OR11H6Q8NGC7 330 aa16.77■□□□□ 0.28
VPS28-206ENST00000526734 WFDC12Q8WWY7 111 aa16.77■□□□□ 0.28
VPS28-206ENST00000526734 GAL3ST2Q9H3Q3 398 aa16.77■□□□□ 0.28
VPS28-206ENST00000526734 ZNF696Q9H7X3 374 aa16.77■□□□□ 0.28
VPS28-206ENST00000526734 RAB18Q9NP72 206 aa16.77■□□□□ 0.28
VPS28-206ENST00000526734 TMEM138Q9NPI0 162 aa16.77■□□□□ 0.28
VPS28-206ENST00000526734 TAS2R4Q9NYW5 299 aa16.77■□□□□ 0.28
VPS28-206ENST00000526734 PSORS1C1Q9UIG5 152 aa16.77■□□□□ 0.28
VPS28-206ENST00000526734 SESN1Q9Y6P5 492 aa16.77■□□□□ 0.28
VPS28-206ENST00000526734 TRGV10A0A0A0MS01 117 aa16.76■□□□□ 0.27
VPS28-206ENST00000526734 FAM90A8PA6NJQ4 464 aa16.76■□□□□ 0.27
VPS28-206ENST00000526734 ODF3BA8MYP8 253 aa16.76■□□□□ 0.27
VPS28-206ENST00000526734 H3BUX3 64 aa16.76■□□□□ 0.27
VPS28-206ENST00000526734 CLPXO76031 633 aa16.76■□□□□ 0.27
VPS28-206ENST00000526734 PRR31Q5SQ13 230 aa16.76■□□□□ 0.27
VPS28-206ENST00000526734 ZNF626Q68DY1 528 aa16.76■□□□□ 0.27
VPS28-206ENST00000526734 ZNF485Q8NCK3 441 aa16.76■□□□□ 0.27
VPS28-206ENST00000526734 TNFAIP8L1Q8WVP5 186 aa16.76■□□□□ 0.27
VPS28-206ENST00000526734 THRSPQ92748 146 aa16.76■□□□□ 0.27
VPS28-206ENST00000526734 AJUBAQ96IF1 538 aa16.76■□□□□ 0.27
VPS28-206ENST00000526734 SSX3Q99909 188 aa16.76■□□□□ 0.27
VPS28-206ENST00000526734 C16orf95Q9H693 158 aa16.76■□□□□ 0.27
VPS28-206ENST00000526734 TAS2R3Q9NYW6 316 aa16.76■□□□□ 0.27
VPS28-206ENST00000526734 CKLFQ9UBR5 152 aa16.76■□□□□ 0.27
VPS28-206ENST00000526734 CLEC2DQ9UHP7 191 aa16.76■□□□□ 0.27
VPS28-206ENST00000526734 TRBV5-5A0A0J9YX44 114 aa16.75■□□□□ 0.27
VPS28-206ENST00000526734 H0YJX3 145 aa16.75■□□□□ 0.27
VPS28-206ENST00000526734 GABRPO00591 440 aa16.75■□□□□ 0.27
VPS28-206ENST00000526734 MYL12BO14950 172 aa16.75■□□□□ 0.27
VPS28-206ENST00000526734 TSPAN9O75954 239 aa16.75■□□□□ 0.27
VPS28-206ENST00000526734 GNAO1P09471 354 aa16.75■□□□□ 0.27
VPS28-206ENST00000526734 CALCBP10092 127 aa16.75■□□□□ 0.27
VPS28-206ENST00000526734 SLC34A1Q06495 639 aa16.75■□□□□ 0.27
VPS28-206ENST00000526734 GABPB1Q06547 395 aaPredicted RBP16.75■□□□□ 0.27
VPS28-206ENST00000526734 IL13RA2Q14627 380 aa16.75■□□□□ 0.27
VPS28-206ENST00000526734 OR52W1Q6IF63 320 aa16.75■□□□□ 0.27
VPS28-206ENST00000526734 RNF144BQ7Z419 303 aa16.75■□□□□ 0.27
VPS28-206ENST00000526734 TRAPPC6BQ86SZ2 158 aa16.75■□□□□ 0.27
VPS28-206ENST00000526734 STX19Q8N4C7 294 aa16.75■□□□□ 0.27
VPS28-206ENST00000526734 Q8NFD4 153 aa16.75■□□□□ 0.27
VPS28-206ENST00000526734 TFAP2CQ92754 450 aa16.75■□□□□ 0.27
VPS28-206ENST00000526734 CORO2AQ92828 525 aa16.75■□□□□ 0.27
VPS28-206ENST00000526734 GHSRQ92847 366 aa16.75■□□□□ 0.27
VPS28-206ENST00000526734 MALSU1Q96EH3 234 aa16.75■□□□□ 0.27
VPS28-206ENST00000526734 SIRT4Q9Y6E7 314 aaPredicted RBP16.75■□□□□ 0.27
VPS28-206ENST00000526734 A0A0G2JK05 382 aa16.74■□□□□ 0.27
VPS28-206ENST00000526734 VGLL3A8MV65 326 aa16.74■□□□□ 0.27
VPS28-206ENST00000526734 ANKRD65E5RJM6 399 aa16.74■□□□□ 0.27
VPS28-206ENST00000526734 DEGS1O15121 323 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms