RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 LOC100506127A0A0U1RQW1 187 aa17.2■□□□□ 0.34
CD44-222ENST00000526025 A8MV72 311 aaPredicted RBP17.2■□□□□ 0.34
CD44-222ENST00000526025 ENSAO43768 121 aaKnown RBP17.2■□□□□ 0.34
CD44-222ENST00000526025 TK1P04183 234 aa17.2■□□□□ 0.34
CD44-222ENST00000526025 LIPFP07098 398 aa17.2■□□□□ 0.34
CD44-222ENST00000526025 CEBPDP49716 269 aaPredicted RBP17.2■□□□□ 0.34
CD44-222ENST00000526025 RAB11BQ15907 218 aa17.2■□□□□ 0.34
CD44-222ENST00000526025 MPV17LQ2QL34 196 aa17.2■□□□□ 0.34
CD44-222ENST00000526025 Q6P435 159 aa17.2■□□□□ 0.34
CD44-222ENST00000526025 TMEM185AQ8NFB2 350 aa17.2■□□□□ 0.34
CD44-222ENST00000526025 OR5D13Q8NGL4 314 aa17.2■□□□□ 0.34
CD44-222ENST00000526025 PPP1R35Q8TAP8 253 aa17.2■□□□□ 0.34
CD44-222ENST00000526025 ST8SIA4Q92187 359 aa17.2■□□□□ 0.34
CD44-222ENST00000526025 CENPOQ9BU64 300 aa17.2■□□□□ 0.34
CD44-222ENST00000526025 FUNDC2Q9BWH2 189 aa17.2■□□□□ 0.34
CD44-222ENST00000526025 GSX1Q9H4S2 264 aaPredicted RBP17.2■□□□□ 0.34
CD44-222ENST00000526025 FBLN5Q9UBX5 448 aa17.2■□□□□ 0.34
CD44-222ENST00000526025 METRNQ9UJH8 293 aa17.2■□□□□ 0.34
CD44-222ENST00000526025 ST3GAL6Q9Y274 331 aa17.2■□□□□ 0.34
CD44-222ENST00000526025 KIR2DS1A0A191URI9 304 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 FAM90A10PA6NDY2 464 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 FAM90A18PA6NE21 464 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 FAM90A16PA6NEW6 464 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 FAM90A20PA6NIJ5 464 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 FAM90A8PA6NJQ4 464 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 FAM90A7PA6NKC0 464 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 IFITM5A6NNB3 132 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 FAM90A22PA8MWA6 464 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 FAM90A12PA8MX19 464 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 FAM90A5PA8MXJ8 464 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 FAM90A23PA8MXZ1 464 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 AIPO00170 330 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 OR2H2O95918 312 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 TFF1P04155 84 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 FAM90A15PP0C7V4 464 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 FAM90A13PP0C7W8 464 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 FAM90A14PP0C7W9 464 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 FAM90A24PP0C7X0 464 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 SELLP14151 372 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 RPL5P46777 297 aaKnown RBP17.19■□□□□ 0.34
CD44-222ENST00000526025 BTNL3Q6UXE8 466 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 BTN2A1Q7KYR7 527 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 OR2W3Q7Z3T1 314 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 OR8H2Q8N162 312 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 KCNG3Q8TAE7 436 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 DCTN5Q9BTE1 182 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 YAE1D1Q9NRH1 226 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 STEAP1Q9UHE8 339 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 RPUSD1Q9UJJ7 312 aaKnown RBP17.19■□□□□ 0.34
CD44-222ENST00000526025 INSIG2Q9Y5U4 225 aa17.19■□□□□ 0.34
CD44-222ENST00000526025 TMEM82A0PJX8 343 aa17.18■□□□□ 0.34
CD44-222ENST00000526025 NOTOA8MTQ0 251 aa17.18■□□□□ 0.34
CD44-222ENST00000526025 C22orf46C9J442 243 aa17.18■□□□□ 0.34
CD44-222ENST00000526025 H3BUI4 141 aa17.18■□□□□ 0.34
CD44-222ENST00000526025 TMEM127O75204 238 aa17.18■□□□□ 0.34
CD44-222ENST00000526025 CSN2P05814 226 aa17.18■□□□□ 0.34
CD44-222ENST00000526025 MGMTP16455 207 aa17.18■□□□□ 0.34
CD44-222ENST00000526025 DUSP1P28562 367 aa17.18■□□□□ 0.34
CD44-222ENST00000526025 QRFPP83859 136 aa17.18■□□□□ 0.34
CD44-222ENST00000526025 DCAF12L2Q5VW00 463 aa17.18■□□□□ 0.34
CD44-222ENST00000526025 C17orf107Q6ZR85 190 aa17.18■□□□□ 0.34
CD44-222ENST00000526025 GPR141Q7Z602 305 aa17.18■□□□□ 0.34
CD44-222ENST00000526025 ANKRD13BQ86YJ7 626 aa17.18■□□□□ 0.34
CD44-222ENST00000526025 ASCC1Q8N9N2 400 aaKnown RBP17.18■□□□□ 0.34
CD44-222ENST00000526025 LY6G5BQ8NDX9 201 aa17.18■□□□□ 0.34
CD44-222ENST00000526025 NUDT16L1Q9BRJ7 211 aaKnown RBP17.18■□□□□ 0.34
CD44-222ENST00000526025 SHARPINQ9H0F6 387 aa17.18■□□□□ 0.34
CD44-222ENST00000526025 MMP26Q9NRE1 261 aa17.18■□□□□ 0.34
CD44-222ENST00000526025 SCOCQ9UIL1 159 aa17.18■□□□□ 0.34
CD44-222ENST00000526025 A0A0G2JK05 382 aa17.17■□□□□ 0.34
CD44-222ENST00000526025 TMEM14DPA8MWL7 114 aa17.17■□□□□ 0.34
CD44-222ENST00000526025 DEGS1O15121 323 aa17.17■□□□□ 0.34
CD44-222ENST00000526025 VSIG8P0DPA2 414 aa17.17■□□□□ 0.34
CD44-222ENST00000526025 CALCBP10092 127 aa17.17■□□□□ 0.34
CD44-222ENST00000526025 ARSBP15848 533 aa17.17■□□□□ 0.34
CD44-222ENST00000526025 NDUFB7P17568 137 aa17.17■□□□□ 0.34
CD44-222ENST00000526025 SDC2P34741 201 aa17.17■□□□□ 0.34
CD44-222ENST00000526025 SNU13P55769 128 aaKnown RBP17.17■□□□□ 0.34
CD44-222ENST00000526025 OR10A3P58181 314 aa17.17■□□□□ 0.34
CD44-222ENST00000526025 PAX5Q02548 391 aa17.17■□□□□ 0.34
CD44-222ENST00000526025 PIGYQ3MUY2 71 aa17.17■□□□□ 0.34
CD44-222ENST00000526025 TEX29Q8N6K0 151 aa17.17■□□□□ 0.34
CD44-222ENST00000526025 Q96M66 194 aa17.17■□□□□ 0.34
CD44-222ENST00000526025 SPACA1Q9HBV2 294 aa17.17■□□□□ 0.34
CD44-222ENST00000526025 A0A1W2PP11 408 aa17.16■□□□□ 0.34
CD44-222ENST00000526025 SLC33A1O00400 549 aaPredicted RBP17.16■□□□□ 0.34
CD44-222ENST00000526025 MGST3O14880 152 aa17.16■□□□□ 0.34
CD44-222ENST00000526025 PSPNO60542 156 aa17.16■□□□□ 0.34
CD44-222ENST00000526025 CRTAPO75718 401 aaPredicted RBP17.16■□□□□ 0.34
CD44-222ENST00000526025 GABARAPO95166 117 aa17.16■□□□□ 0.34
CD44-222ENST00000526025 PPIAL4GP0DN37 164 aa17.16■□□□□ 0.34
CD44-222ENST00000526025 ZNF44P15621 663 aa17.16■□□□□ 0.34
CD44-222ENST00000526025 ERP29P30040 261 aaKnown RBP17.16■□□□□ 0.34
CD44-222ENST00000526025 KCNJ3P48549 501 aa17.16■□□□□ 0.34
CD44-222ENST00000526025 PAX8Q06710 450 aa17.16■□□□□ 0.34
CD44-222ENST00000526025 NR2C2APQ86WQ0 139 aa17.16■□□□□ 0.34
CD44-222ENST00000526025 FGFRL1Q8N441 504 aa17.16■□□□□ 0.34
CD44-222ENST00000526025 TMEM104Q8NE00 496 aa17.16■□□□□ 0.34
CD44-222ENST00000526025 FAM3DQ96BQ1 224 aa17.16■□□□□ 0.34
CD44-222ENST00000526025 TM2D1Q9BX74 207 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms