RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 RPL36Q9Y3U8 105 aaKnown RBP4.27□□□□□ -1.73
SVIP-202ENST00000525670 MXRA5Q9NR99 2828 aa4.27□□□□□ -1.73
SVIP-202ENST00000525670 PPIAL4EA0A075B759 164 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 A0A0U1RQV5 110 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 A0A1W2PRD5 423 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 A0A1W2PRF3 423 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 A0A1W2PRM7 423 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 GAGE12JA6NER3 117 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 OOEPA6NGQ2 149 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 ACOD1A6NK06 481 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 PTGES3LE9PB15 166 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 PPIAL4DF5H284 164 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 J3QRE1 110 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 SLC1A7O00341 560 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 SPRY1O43609 319 aaPredicted RBP4.26□□□□□ -1.73
SVIP-202ENST00000525670 PLPP2O43688 288 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 ANGPTL7O43827 346 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 MPZL2O60487 215 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 ZNF254O75437 659 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 NRASP01111 189 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 MT-ND2P03891 347 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 MSMBP08118 114 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 TACSTD2P09758 323 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 UBCP0CG48 685 aaKnown RBP4.26□□□□□ -1.73
SVIP-202ENST00000525670 LIMS3P0CW19 117 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 LIMS4P0CW20 117 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 PPIAL4FP0DN26 164 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 PIPP12273 146 aaPredicted RBP4.26□□□□□ -1.73
SVIP-202ENST00000525670 CFL1P23528 166 aaKnown RBP4.26□□□□□ -1.73
SVIP-202ENST00000525670 C21orf33P30042 268 aaPredicted RBP4.26□□□□□ -1.73
SVIP-202ENST00000525670 MDH2P40926 338 aaKnown RBP4.26□□□□□ -1.73
SVIP-202ENST00000525670 MAP2K4P45985 399 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 HAAOP46952 286 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 GABRA2P47869 451 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 PITPNBP48739 271 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 CAPZA1P52907 286 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 ISL1P61371 349 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 LMO4P61968 165 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 ACTA2P62736 377 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 GNB2P62879 340 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 ACTG2P63267 376 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 RIPPLY1Q0D2K3 151 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 ST3GAL4Q11206 333 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 RAB40BQ12829 278 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 ALKBH1Q13686 389 aaKnown RBP4.26□□□□□ -1.73
SVIP-202ENST00000525670 INSL4Q14641 139 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 ESCO2Q56NI9 601 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 FAM120AOSQ5T036 256 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 WDR82Q6UXN9 313 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 C1orf174Q8IYL3 243 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 FTMTQ8N4E7 242 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 SPICQ8N5J4 248 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 GCSAMQ8N6F7 178 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 SCCPDHQ8NBX0 429 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 CSNK2A3Q8NEV1 391 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 TMEM185AQ8NFB2 350 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 OR51F2Q8NH61 342 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 TRUB1Q8WWH5 349 aaKnown RBP4.26□□□□□ -1.73
SVIP-202ENST00000525670 OR5P3Q8WZ94 311 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 H1FXQ92522 213 aaKnown RBP4.26□□□□□ -1.73
SVIP-202ENST00000525670 RGP1Q92546 391 aaPredicted RBP4.26□□□□□ -1.73
SVIP-202ENST00000525670 TMEM186Q96B77 213 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 FGGYQ96C11 551 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 RAB39BQ96DA2 213 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 RDH12Q96NR8 316 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 FAM192AQ9GZU8 254 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 SHARPINQ9H0F6 387 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 RGCCQ9H4X1 137 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 MAP6D1Q9H9H5 199 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 MMP26Q9NRE1 261 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 PAK1IP1Q9NWT1 392 aaPredicted RBP4.26□□□□□ -1.73
SVIP-202ENST00000525670 TAS2R4Q9NYW5 299 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 ZNF391Q9UJN7 358 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 EXOGQ9Y2C4 368 aaKnown RBP4.26□□□□□ -1.73
SVIP-202ENST00000525670 PPIAL4AQ9Y536 164 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 SOX21Q9Y651 276 aaPredicted RBP4.26□□□□□ -1.73
SVIP-202ENST00000525670 V9GYS6 101 aa4.26□□□□□ -1.73
SVIP-202ENST00000525670 DOCK11Q5JSL3 2073 aa4.25□□□□□ -1.73
SVIP-202ENST00000525670 IGKV1-27A0A075B6S5 117 aa4.25□□□□□ -1.73
SVIP-202ENST00000525670 TRAV40A0A0B4J280 105 aa4.25□□□□□ -1.73
SVIP-202ENST00000525670 TRBV2A0A0J9YWF9 115 aa4.25□□□□□ -1.73
SVIP-202ENST00000525670 MDFIC2A0A1B0GVS7 189 aa4.25□□□□□ -1.73
SVIP-202ENST00000525670 MAGEA13PA6NCF6 341 aa4.25□□□□□ -1.73
SVIP-202ENST00000525670 NKX6-3A6NJ46 265 aa4.25□□□□□ -1.73
SVIP-202ENST00000525670 OR4C45A6NMZ5 311 aa4.25□□□□□ -1.73
SVIP-202ENST00000525670 F8VVB4 439 aa4.25□□□□□ -1.73
SVIP-202ENST00000525670 F8VWA3 439 aa4.25□□□□□ -1.73
SVIP-202ENST00000525670 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.25□□□□□ -1.73
SVIP-202ENST00000525670 LGALS8O00214 317 aa4.25□□□□□ -1.73
SVIP-202ENST00000525670 HSPB6O14558 160 aa4.25□□□□□ -1.73
SVIP-202ENST00000525670 GMDSO60547 372 aa4.25□□□□□ -1.73
SVIP-202ENST00000525670 MTRF1O75570 445 aaKnown RBP4.25□□□□□ -1.73
SVIP-202ENST00000525670 FCN3O75636 299 aa4.25□□□□□ -1.73
SVIP-202ENST00000525670 NXPH2O95156 264 aa4.25□□□□□ -1.73
SVIP-202ENST00000525670 PTBP3O95758 552 aaKnown RBP4.25□□□□□ -1.73
SVIP-202ENST00000525670 IGLV3-1P01715 115 aa4.25□□□□□ -1.73
SVIP-202ENST00000525670 HCKP08631 526 aa4.25□□□□□ -1.73
SVIP-202ENST00000525670 RPSAP08865 295 aaKnown RBP4.25□□□□□ -1.73
SVIP-202ENST00000525670 HSMCR30P0CW71 290 aa4.25□□□□□ -1.73
SVIP-202ENST00000525670 SRD5A1P18405 259 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms