RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 LOC389332A0A1B0GUA5 103 aa3.99□□□□□ -1.77
USP47-204ENST00000525078 GNG14A0A1W2PPG7 69 aa3.99□□□□□ -1.77
USP47-204ENST00000525078 PGPA6NDG6 321 aa3.99□□□□□ -1.77
USP47-204ENST00000525078 EVPLLA8MZ36 301 aa3.99□□□□□ -1.77
USP47-204ENST00000525078 KRTAP4-16G5E9R7 235 aaPredicted RBP3.99□□□□□ -1.77
USP47-204ENST00000525078 EDIL3O43854 480 aa3.99□□□□□ -1.77
USP47-204ENST00000525078 SERPINB7O75635 380 aa3.99□□□□□ -1.77
USP47-204ENST00000525078 CNMDO75829 334 aa3.99□□□□□ -1.77
USP47-204ENST00000525078 HSPB1P04792 205 aaKnown RBP3.99□□□□□ -1.77
USP47-204ENST00000525078 PRTN3P24158 256 aa3.99□□□□□ -1.77
USP47-204ENST00000525078 Q499Y3 187 aa3.99□□□□□ -1.77
USP47-204ENST00000525078 NAA40Q86UY6 237 aa3.99□□□□□ -1.77
USP47-204ENST00000525078 TMEM161BQ8NDZ6 487 aa3.99□□□□□ -1.77
USP47-204ENST00000525078 NPBQ8NG41 125 aa3.99□□□□□ -1.77
USP47-204ENST00000525078 OR51D1Q8NGF3 324 aa3.99□□□□□ -1.77
USP47-204ENST00000525078 OR1P1Q8NH06 330 aa3.99□□□□□ -1.77
USP47-204ENST00000525078 RHOXF1Q8NHV9 184 aa3.99□□□□□ -1.77
USP47-204ENST00000525078 TMBIM1Q969X1 311 aa3.99□□□□□ -1.77
USP47-204ENST00000525078 KCNS1Q96KK3 526 aa3.99□□□□□ -1.77
USP47-204ENST00000525078 OR4K3Q96R72 315 aa3.99□□□□□ -1.77
USP47-204ENST00000525078 SOSTQ9BQB4 213 aa3.99□□□□□ -1.77
USP47-204ENST00000525078 PARVAQ9NVD7 372 aa3.99□□□□□ -1.77
USP47-204ENST00000525078 ZNF391Q9UJN7 358 aa3.99□□□□□ -1.77
USP47-204ENST00000525078 C2orf16Q68DN1 1984 aa3.99□□□□□ -1.77
USP47-204ENST00000525078 ASTN1O14525 1302 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 ZBED9Q6R2W3 1325 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 VWA8A3KMH1 1905 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 TRAV8-3A0A0A6YYJ7 113 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 IGHV6-1A0A0B4J1U7 121 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 LOC105371267A0A1B0GV96 52 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 ARGFXA6NJG6 315 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 DNASE2O00115 360 aaPredicted RBP3.98□□□□□ -1.77
USP47-204ENST00000525078 CD5P06127 495 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 IL3P08700 152 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 HTR1EP28566 365 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 PFN3P60673 137 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 NAA20P61599 178 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 GRB2P62993 217 aaKnown RBP3.98□□□□□ -1.77
USP47-204ENST00000525078 PNOCQ13519 176 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 ALX1Q15699 326 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 SNRNP35Q16560 246 aaKnown RBP3.98□□□□□ -1.77
USP47-204ENST00000525078 Q1RN00 199 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 FBXL19-AS1Q494R0 122 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 UBE2NLQ5JXB2 153 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 ACP7Q6ZNF0 438 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 OLIG3Q7RTU3 272 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 GALNT10Q86SR1 603 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 LRRC25Q8N386 305 aaPredicted RBP3.98□□□□□ -1.77
USP47-204ENST00000525078 DRAM1Q8N682 238 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.98□□□□□ -1.77
USP47-204ENST00000525078 OR4M2Q8NGB6 313 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 OR1J4Q8NGS1 313 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 OR11L1Q8NGX0 322 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 OR10D3Q8NH80 312 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 EEF1AKMT1Q8WVE0 214 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 CLDN23Q96B33 292 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 TM4SF18Q96CE8 201 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 NEURL3Q96EH8 262 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 TMEM101Q96IK0 257 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 BTF3L4Q96K17 158 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 LINC01587Q99440 93 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 NIPSNAP1Q9BPW8 284 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 HOPXQ9BPY8 73 aaPredicted RBP3.98□□□□□ -1.77
USP47-204ENST00000525078 ANAPC13Q9BS18 74 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 TXNIPQ9H3M7 391 aa3.98□□□□□ -1.77
USP47-204ENST00000525078 NUFIP1Q9UHK0 495 aaKnown RBP3.98□□□□□ -1.77
USP47-204ENST00000525078 C8orf87E5RJ46 101 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 ZNF354AO60765 605 aaPredicted RBP3.97□□□□□ -1.77
USP47-204ENST00000525078 CXCL3P19876 107 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 MIPP30301 263 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 MEOX2P50222 304 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 ERCC8Q13216 396 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 EDDM3AQ14507 147 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 POU6F1Q14863 301 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 KIAA0040Q15053 153 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 TMEM183BQ1AE95 376 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 RSPO1Q2MKA7 263 aaPredicted RBP3.97□□□□□ -1.77
USP47-204ENST00000525078 ACSBG2Q5FVE4 666 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 TCTEX1D4Q5JR98 221 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 ZNF684Q5T5D7 378 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 NXNL2Q5VZ03 156 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 ZNF530Q6P9A1 599 aaPredicted RBP3.97□□□□□ -1.77
USP47-204ENST00000525078 DHRS4L2Q6PKH6 230 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 ZNF497Q6ZNH5 498 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 CAMK2N1Q7Z7J9 78 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 LYG2Q86SG7 212 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 TMEM183AQ8IXX5 376 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 ZNF525Q8N782 197 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 OR4M1Q8NGD0 313 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 OR2D3Q8NGH3 330 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 Q8WTZ3 238 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 ABHD3Q8WU67 409 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 PYDC1Q8WXC3 89 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 TAMM41Q96BW9 452 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 TMA16Q96EY4 203 aaKnown RBP3.97□□□□□ -1.77
USP47-204ENST00000525078 ATOH8Q96SQ7 321 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 DEFB126Q9BYW3 111 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 WSB1Q9Y6I7 421 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 ZNF780BQ9Y6R6 833 aa3.97□□□□□ -1.77
USP47-204ENST00000525078 RAI1Q7Z5J4 1906 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms