RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 TFAP2CQ92754 450 aa20.58■□□□□ 0.89
PVT1-219ENST00000523427 GAL3ST2Q9H3Q3 398 aa20.58■□□□□ 0.89
PVT1-219ENST00000523427 CLN6Q9NWW5 311 aa20.58■□□□□ 0.89
PVT1-219ENST00000523427 CYB5AP00167 134 aa20.57■□□□□ 0.88
PVT1-219ENST00000523427 GLIPR1P48060 266 aa20.57■□□□□ 0.88
PVT1-219ENST00000523427 AESQ08117 197 aa20.57■□□□□ 0.88
PVT1-219ENST00000523427 TPTE2P1Q5T6R2 138 aa20.57■□□□□ 0.88
PVT1-219ENST00000523427 Q8IYB0 196 aa20.57■□□□□ 0.88
PVT1-219ENST00000523427 NOL4LQ96MY1 436 aaPredicted RBP20.57■□□□□ 0.88
PVT1-219ENST00000523427 CHST5Q9GZS9 411 aa20.57■□□□□ 0.88
PVT1-219ENST00000523427 LINC00527Q9UJ94 153 aa20.57■□□□□ 0.88
PVT1-219ENST00000523427 GSTK1Q9Y2Q3 226 aa20.57■□□□□ 0.88
PVT1-219ENST00000523427 ENTPD6O75354 484 aa20.56■□□□□ 0.88
PVT1-219ENST00000523427 IGLV1-47P01700 117 aa20.56■□□□□ 0.88
PVT1-219ENST00000523427 CEACAM3P40198 252 aa20.56■□□□□ 0.88
PVT1-219ENST00000523427 MNDAP41218 407 aa20.56■□□□□ 0.88
PVT1-219ENST00000523427 ATP1B3P54709 279 aa20.56■□□□□ 0.88
PVT1-219ENST00000523427 RAB25P57735 213 aa20.56■□□□□ 0.88
PVT1-219ENST00000523427 RPL23AP62750 156 aaKnown RBP20.56■□□□□ 0.88
PVT1-219ENST00000523427 SCN1BQ07699 218 aa20.56■□□□□ 0.88
PVT1-219ENST00000523427 UNQ9370/PRO34162Q6UXP9 181 aa20.56■□□□□ 0.88
PVT1-219ENST00000523427 HEPN1Q6WQI6 88 aa20.56■□□□□ 0.88
PVT1-219ENST00000523427 CATSPERDQ86XM0 798 aa20.56■□□□□ 0.88
PVT1-219ENST00000523427 DUX3Q96PT4 197 aa20.56■□□□□ 0.88
PVT1-219ENST00000523427 IL4I1Q96RQ9 567 aa20.56■□□□□ 0.88
PVT1-219ENST00000523427 MNTQ99583 582 aa20.56■□□□□ 0.88
PVT1-219ENST00000523427 MCRIP2Q9BUT9 160 aaKnown RBP20.56■□□□□ 0.88
PVT1-219ENST00000523427 HHLA2Q9UM44 414 aa20.56■□□□□ 0.88
PVT1-219ENST00000523427 TRBV2A0A0J9YWF9 115 aa20.55■□□□□ 0.88
PVT1-219ENST00000523427 BUB1B-PAK6H3BSN5 160 aa20.55■□□□□ 0.88
PVT1-219ENST00000523427 APOL3O95236 402 aa20.55■□□□□ 0.88
PVT1-219ENST00000523427 ERP29P30040 261 aaKnown RBP20.55■□□□□ 0.88
PVT1-219ENST00000523427 RBP2P50120 134 aa20.55■□□□□ 0.88
PVT1-219ENST00000523427 UTF1Q5T230 341 aa20.55■□□□□ 0.88
PVT1-219ENST00000523427 OR2W3Q7Z3T1 314 aa20.55■□□□□ 0.88
PVT1-219ENST00000523427 SPATA24Q86W54 205 aa20.55■□□□□ 0.88
PVT1-219ENST00000523427 RDH10Q8IZV5 341 aa20.55■□□□□ 0.88
PVT1-219ENST00000523427 RFT1Q96AA3 541 aa20.55■□□□□ 0.88
PVT1-219ENST00000523427 THTPAQ9BU02 230 aa20.55■□□□□ 0.88
PVT1-219ENST00000523427 EXOSC4Q9NPD3 245 aaKnown RBP20.55■□□□□ 0.88
PVT1-219ENST00000523427 AQP12BA6NM10 295 aa20.54■□□□□ 0.88
PVT1-219ENST00000523427 M0QZK8 103 aa20.54■□□□□ 0.88
PVT1-219ENST00000523427 NFYBP25208 207 aa20.54■□□□□ 0.88
PVT1-219ENST00000523427 PRRX1P54821 245 aa20.54■□□□□ 0.88
PVT1-219ENST00000523427 MTCP1P56278 107 aa20.54■□□□□ 0.88
PVT1-219ENST00000523427 DGCR2P98153 550 aa20.54■□□□□ 0.88
PVT1-219ENST00000523427 HLA-DRB5Q30154 266 aa20.54■□□□□ 0.88
PVT1-219ENST00000523427 AQP12AQ8IXF9 295 aa20.54■□□□□ 0.88
PVT1-219ENST00000523427 KLHL30-AS1Q8NEE0 82 aa20.54■□□□□ 0.88
PVT1-219ENST00000523427 PRRG3Q9BZD7 231 aa20.54■□□□□ 0.88
PVT1-219ENST00000523427 MOB4Q9Y3A3 225 aa20.54■□□□□ 0.88
PVT1-219ENST00000523427 PCDHGB5Q9Y5G0 923 aa20.54■□□□□ 0.88
PVT1-219ENST00000523427 HSPE1-MOB4S4R3N1 261 aa20.54■□□□□ 0.88
PVT1-219ENST00000523427 U3KQK5 164 aa20.54■□□□□ 0.88
PVT1-219ENST00000523427 SH2D1BO14796 132 aa20.53■□□□□ 0.88
PVT1-219ENST00000523427 OR2H2O95918 312 aa20.53■□□□□ 0.88
PVT1-219ENST00000523427 FAM106CPP0CH98 169 aa20.53■□□□□ 0.88
PVT1-219ENST00000523427 DAPP51397 102 aa20.53■□□□□ 0.88
PVT1-219ENST00000523427 DCTN2Q13561 401 aaKnown RBP20.53■□□□□ 0.88
PVT1-219ENST00000523427 HES1Q14469 280 aa20.53■□□□□ 0.88
PVT1-219ENST00000523427 HNF4GQ14541 408 aa20.53■□□□□ 0.88
PVT1-219ENST00000523427 ZNF146Q15072 292 aa20.53■□□□□ 0.88
PVT1-219ENST00000523427 AADACL4Q5VUY2 407 aa20.53■□□□□ 0.88
PVT1-219ENST00000523427 NXNL2Q5VZ03 156 aa20.53■□□□□ 0.88
PVT1-219ENST00000523427 OR4D6Q8NGJ1 314 aa20.53■□□□□ 0.88
PVT1-219ENST00000523427 SEBOXQ9HB31 216 aaPredicted RBP20.53■□□□□ 0.88
PVT1-219ENST00000523427 FUOMA2VDF0 154 aa20.52■□□□□ 0.88
PVT1-219ENST00000523427 SERPINE3A8MV23 424 aa20.52■□□□□ 0.88
PVT1-219ENST00000523427 MITFO75030 526 aaPredicted RBP20.52■□□□□ 0.88
PVT1-219ENST00000523427 FKBP6O75344 327 aa20.52■□□□□ 0.88
PVT1-219ENST00000523427 IGHV3-7P01780 117 aa20.52■□□□□ 0.88
PVT1-219ENST00000523427 PTGFRP43088 359 aa20.52■□□□□ 0.88
PVT1-219ENST00000523427 CCDC144NLQ6NUI1 221 aa20.52■□□□□ 0.88
PVT1-219ENST00000523427 OR56B4Q8NH76 319 aa20.52■□□□□ 0.88
PVT1-219ENST00000523427 TMEM163Q8TC26 289 aa20.52■□□□□ 0.88
PVT1-219ENST00000523427 CREB3L1Q96BA8 519 aa20.52■□□□□ 0.88
PVT1-219ENST00000523427 HMG20AQ9NP66 347 aa20.52■□□□□ 0.88
PVT1-219ENST00000523427 TAS2R3Q9NYW6 316 aa20.52■□□□□ 0.88
PVT1-219ENST00000523427 LOC107986453A0A1B0GWG9 222 aa20.51■□□□□ 0.87
PVT1-219ENST00000523427 A0A1W2PQL4 384 aaPredicted RBP20.51■□□□□ 0.87
PVT1-219ENST00000523427 METTL15A6NJ78 407 aa20.51■□□□□ 0.87
PVT1-219ENST00000523427 SNRNP70P08621 437 aaKnown RBP20.51■□□□□ 0.87
PVT1-219ENST00000523427 ZNF44P15621 663 aa20.51■□□□□ 0.87
PVT1-219ENST00000523427 CALB2P22676 271 aa20.51■□□□□ 0.87
PVT1-219ENST00000523427 LMO1P25800 156 aa20.51■□□□□ 0.87
PVT1-219ENST00000523427 EPHA2P29317 976 aa20.51■□□□□ 0.87
PVT1-219ENST00000523427 MYCNOSP40205 109 aa20.51■□□□□ 0.87
PVT1-219ENST00000523427 CDC42P60953 191 aa20.51■□□□□ 0.87
PVT1-219ENST00000523427 SPIN3Q5JUX0 258 aa20.51■□□□□ 0.87
PVT1-219ENST00000523427 PRSS35Q8N3Z0 413 aa20.51■□□□□ 0.87
PVT1-219ENST00000523427 OR10H4Q8NGA5 316 aa20.51■□□□□ 0.87
PVT1-219ENST00000523427 CORO2AQ92828 525 aa20.51■□□□□ 0.87
PVT1-219ENST00000523427 RPEQ96AT9 228 aa20.51■□□□□ 0.87
PVT1-219ENST00000523427 ADAT3Q96EY9 351 aaPredicted RBP20.51■□□□□ 0.87
PVT1-219ENST00000523427 IGKV1-9A0A0C4DH69 117 aa20.5■□□□□ 0.87
PVT1-219ENST00000523427 ODAMA1E959 279 aa20.5■□□□□ 0.87
PVT1-219ENST00000523427 H0YHG0 523 aa20.5■□□□□ 0.87
PVT1-219ENST00000523427 LY6LH3BQJ8 138 aa20.5■□□□□ 0.87
PVT1-219ENST00000523427 OCM2P0CE71 109 aa20.5■□□□□ 0.87
PVT1-219ENST00000523427 OCMP0CE72 109 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms