RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, human

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-216	ENST00000521918	MPZL2	O60487	215 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	ISG15	P05161	165 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	LIMS3	P0CW19	117 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	LIMS4	P0CW20	117 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	PRTN3	P24158	256 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	BPIFB3	P59826	476 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	GMFB	P60983	142 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	ARF6	P62330	175 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	ACTA2	P62736	377 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	ACTG2	P63267	376 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	ADARB1	P78563	741 aa	Known RBP	4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	RAB40B	Q12829	278 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	IL24	Q13007	206 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	SLC9A3R2	Q15599	337 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	SMN1	Q16637	294 aa	Known RBP	4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	DEFB112	Q30KQ8	113 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	SMIM21	Q3B7S5	101 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	ZNF691	Q5VV52	312 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	LPCAT4	Q643R3	524 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	RUSC1-AS1	Q66K80	236 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	METAP1D	Q6UB28	335 aa	Predicted RBP	4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	UTS2B	Q765I0	119 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	FAM220A	Q7Z4H9	259 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	KCTD20	Q7Z5Y7	419 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	EGFL6	Q8IUX8	553 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	RDH10	Q8IZV5	341 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	SYS1	Q8N2H4	156 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	ACBD7	Q8N6N7	88 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	CD177	Q8N6Q3	437 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	PACRGL	Q8N7B6	248 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	ZNRF1	Q8ND25	227 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	BEND2	Q8NDZ0	799 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	OR52I1	Q8NGK6	324 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	PP6455	Q8WZ26	134 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	RGP1	Q92546	391 aa	Predicted RBP	4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	C4orf36	Q96KX1	117 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	HIST1H2AA	Q96QV6	131 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	PCGF1	Q9BSM1	259 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	ALG8	Q9BVK2	526 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	PKIB	Q9C010	78 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	ISG20L2	Q9H9L3	353 aa	Known RBP	4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	ELL3	Q9HB65	397 aa	Predicted RBP	4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	AMBN	Q9NP70	447 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	INPP5E	Q9NRR6	644 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	RASL12	Q9NYN1	266 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	MTCH1	Q9NZJ7	389 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	DNAJB11	Q9UBS4	358 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	SLC25A10	Q9UBX3	287 aa	Predicted RBP	4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	PCDHGB1	Q9Y5G3	927 aa		4.84	□□□□□ -1.63
SPIDR-216	ENST00000521918	DSCAML1	Q8TD84	2053 aa		4.84	□□□□□ -1.64
SPIDR-216	ENST00000521918	IGHV1-69D	A0A0B4J2H0	117 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	NKX6-3	A6NJ46	265 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	RFPL4A	A6NLU0	287 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	SNTN	A6NMZ2	147 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918		E9PI62	339 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	RFPL4AL1	F8VTS6	287 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	RNASEK-C17orf49	H0YIS7	233 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918		M0R1W7	72 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	NDUFB3	O43676	98 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	ZNF737	O75373	536 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	GATB	O75879	557 aa	Known RBP	4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	CLIC3	O95833	236 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	IGHV1-69	P01742	117 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	MT-ND2	P03891	347 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	SLPI	P03973	132 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	HTR1A	P08908	422 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	ATP6V1E1	P36543	226 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	CEBPD	P49716	269 aa	Predicted RBP	4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	FUT6	P51993	359 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	DLX1	P56177	255 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	DLX6	P56179	175 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	BLOC1S1	P78537	153 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	FOXI1	Q12951	378 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	BAMBI	Q13145	260 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	ALKBH1	Q13686	389 aa	Known RBP	4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	FHL2	Q14192	279 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	RCN1	Q15293	331 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	LRRC10	Q5BKY1	277 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	OGFRL1	Q5TC84	451 aa	Predicted RBP	4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	GPR157	Q5UAW9	335 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	TMEM244	Q5VVB8	128 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	METTL11B	Q5VVY1	283 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	XAF1	Q6GPH4	301 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	ASPHD2	Q6ICH7	369 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	LAIR2	Q6ISS4	152 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	HCP5	Q6MZN7	132 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	TCF23	Q7RTU1	214 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	RNF144B	Q7Z419	303 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	VMO1	Q7Z5L0	202 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	LHFPL3	Q86UP9	236 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	ANGPTL5	Q86XS5	388 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	C11orf42	Q8N5U0	333 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	ZNF485	Q8NCK3	441 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	DNAAF1	Q8NEP3	725 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	ZNF671	Q8TAW3	534 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	CNIH3	Q8TBE1	160 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	TRMT10A	Q8TBZ6	339 aa	Known RBP	4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	NPRL2	Q8WTW4	380 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	STMN2	Q93045	179 aa		4.83	□□□□□ -1.64
SPIDR-216	ENST00000521918	TMIGD2	Q96BF3	282 aa		4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms