RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 MPV17L2Q567V2 206 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 ACTL10Q5JWF8 245 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 ZNF684Q5T5D7 378 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 FAM27D1Q5T7N8 215 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 DUPD1Q68J44 220 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 ZNF695Q8IW36 515 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 NELFCDQ8IXH7 590 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 SYCE1Q8N0S2 351 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 SLC34A3Q8N130 599 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 DRAM1Q8N682 238 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 OTUD6BQ8N6M0 293 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 CYB561D1Q8N8Q1 229 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 CDRT4Q8N9R6 151 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 OR2Y1Q8NGV0 311 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 OR6K6Q8NGW6 343 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 OR6N2Q8NGY6 317 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 RXFP4Q8TDU9 374 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 HSD17B10Q99714 261 aaKnown RBP2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 HEBP1Q9NRV9 189 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 DDIT4Q9NX09 232 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 EURLQ9NYK6 297 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 CYB5R1Q9UHQ9 305 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 YTHDF2Q9Y5A9 579 aaKnown RBP2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 DENND4CQ5VZ89 1909 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 ZFC3H1O60293 1989 aaKnown RBP2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 DOCK3Q8IZD9 2030 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 DOCK8Q8NF50 2099 aa2.05□□□□□ -2.08
HMGN1P28-201ENST00000521340 TMEM223A0PJW6 202 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 GMNCA6NCL1 334 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 MIF4GDA9UHW6 222 aaKnown RBP2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 YKT6O15498 198 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 CALUO43852 315 aaPredicted RBP2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 SLC22A5O76082 557 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 ATP6V1G2O95670 118 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 TTC4O95801 387 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 CST4P01036 141 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 HLA-DQA1P01909 254 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 CD74P04233 296 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 SHBGP04278 402 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 RPS9P46781 194 aaKnown RBP2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 CXCL12P48061 93 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 TAS2R60P59551 318 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 KRTAP12-2P59991 146 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 KRTAP10-8P60410 259 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 MAGOHP61326 146 aaKnown RBP2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 SLC35A1P78382 337 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 DR1Q01658 176 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 CYP24A1Q07973 514 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 C2orf80Q0P641 193 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 ST3GAL4Q11206 333 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 FAHD1Q6P587 224 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 RTL4Q6ZR62 310 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 CCDC121Q6ZUS5 278 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 SMIM5Q71RC9 77 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 CROCCP2Q86T23 111 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 RBM45Q8IUH3 476 aaKnown RBP2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 PRSS58Q8IYP2 241 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 GAPTQ8N292 157 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 LINC00337Q8N6G1 96 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 ZNF645Q8N7E2 425 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 ERMNQ8TAM6 284 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 IFT81Q8WYA0 676 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 TMEM131Q92545 1883 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 GHSRQ92847 366 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 MAGOHBQ96A72 148 aaKnown RBP2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 CHMP6Q96FZ7 201 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 TSNAXQ99598 290 aaKnown RBP2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 UTP23Q9BRU9 249 aaKnown RBP2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 NSRP1Q9H0G5 558 aaKnown RBP2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 NRBP2Q9NSY0 501 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 NECAP2Q9NVZ3 263 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 DMAC2Q9NW81 257 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 MAT2BQ9NZL9 334 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 OR12D3Q9UGF7 316 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 NXT1Q9UKK6 140 aaKnown RBP2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 C15orf41Q9Y2V0 281 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 RFNGQ9Y644 331 aa2.04□□□□□ -2.08
HMGN1P28-201ENST00000521340 SVILO95425 2214 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 NUP214P35658 2090 aaPredicted RBP2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 PCM1Q15154 2024 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 CCDC88CQ9P219 2028 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 HELZP42694 1942 aaKnown RBP2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 ALPK3Q96L96 1907 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 TRAV8-7A0A075B6U6 113 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 IGHV6-1A0A0B4J1U7 121 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 IGHV7-4-1A0A0J9YVY3 117 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 A0A1W2PNU3 283 aaPredicted RBP2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 OR5H1A6NKK0 313 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 NDUFC2-KCTD14E9PQ53 114 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 K7ERQ8 282 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 LIN7AO14910 233 aaPredicted RBP2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 CCDC22O60826 627 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 CCNKO75909 580 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 SLC25A14O95258 325 aaPredicted RBP2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 NPPAP01160 153 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 IGHV3-11P01762 117 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 OR5AL1P0C617 328 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 CISD3P0C7P0 127 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 ZNF688P0C7X2 276 aa2.03□□□□□ -2.08
HMGN1P28-201ENST00000521340 LINC00869P0C866 280 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms