RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 SNAP29O95721 258 aa3.04□□□□□ -1.92
HMGB1P46-201ENST00000520062 SEC11BP0C7V7 166 aa3.04□□□□□ -1.92
HMGB1P46-201ENST00000520062 IMPA1P29218 277 aa3.04□□□□□ -1.92
HMGB1P46-201ENST00000520062 SLC6A1P30531 599 aa3.04□□□□□ -1.92
HMGB1P46-201ENST00000520062 HBG1P69891 147 aa3.04□□□□□ -1.92
HMGB1P46-201ENST00000520062 HBG2P69892 147 aa3.04□□□□□ -1.92
HMGB1P46-201ENST00000520062 RAB31Q13636 194 aa3.04□□□□□ -1.92
HMGB1P46-201ENST00000520062 OR10J3Q5JRS4 329 aa3.04□□□□□ -1.92
HMGB1P46-201ENST00000520062 SLC25A34Q6PIV7 304 aa3.04□□□□□ -1.92
HMGB1P46-201ENST00000520062 FAM183BPQ6ZVS7 135 aa3.04□□□□□ -1.92
HMGB1P46-201ENST00000520062 GALNT10Q86SR1 603 aa3.04□□□□□ -1.92
HMGB1P46-201ENST00000520062 LINC00596Q86U02 117 aa3.04□□□□□ -1.92
HMGB1P46-201ENST00000520062 CRLF3Q8IUI8 442 aa3.04□□□□□ -1.92
HMGB1P46-201ENST00000520062 ACTL9Q8TC94 416 aa3.04□□□□□ -1.92
HMGB1P46-201ENST00000520062 CCDC127Q96BQ5 260 aa3.04□□□□□ -1.92
HMGB1P46-201ENST00000520062 FMC1Q96HJ9 113 aa3.04□□□□□ -1.92
HMGB1P46-201ENST00000520062 PEBP4Q96S96 227 aa3.04□□□□□ -1.92
HMGB1P46-201ENST00000520062 APOL4Q9BPW4 351 aa3.04□□□□□ -1.92
HMGB1P46-201ENST00000520062 SRRQ9GZT4 340 aa3.04□□□□□ -1.92
HMGB1P46-201ENST00000520062 MFSD1Q9H3U5 465 aa3.04□□□□□ -1.92
HMGB1P46-201ENST00000520062 ZNHIT6Q9NWK9 470 aaKnown RBP3.04□□□□□ -1.92
HMGB1P46-201ENST00000520062 PRO0461Q9UI25 63 aa3.04□□□□□ -1.92
HMGB1P46-201ENST00000520062 ZNF780BQ9Y6R6 833 aa3.04□□□□□ -1.92
HMGB1P46-201ENST00000520062 ARID1AO14497 2285 aa3.04□□□□□ -1.92
HMGB1P46-201ENST00000520062 NOS1P29475 1434 aa3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 YEATS2Q9ULM3 1422 aa3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 ZNF98A6NK75 572 aa3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 I3L4J1 428 aa3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 M0QXV9 152 aa3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 CDK14O94921 469 aa3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 ZNF35P13682 527 aa3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 CRATP43155 626 aa3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 C1QTNF8P60827 252 aa3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 PRDX1Q06830 199 aaKnown RBP3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 DNLZQ5SXM8 178 aa3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 CASP12Q6UXS9 341 aa3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 C16orf47Q6ZP98 133 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 FA2HQ7L5A8 372 aa3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 OR6K3Q8NGY3 331 aa3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 YIPF5Q969M3 257 aa3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 PPWD1Q96BP3 646 aaKnown RBP3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 MRAP2Q96G30 205 aa3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 PPP1R36Q96LQ0 422 aa3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 ZNF251Q9BRH9 671 aa3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 RSPO3Q9BXY4 272 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 ANGPTL4Q9BY76 406 aa3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 SLC25A31Q9H0C2 315 aa3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 POMKQ9H5K3 350 aa3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 RHOFQ9HBH0 211 aa3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 RBM12B-AS1Q9P1G2 102 aa3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 NUP214P35658 2090 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P46-201ENST00000520062 DOCK8Q8NF50 2099 aa3.02□□□□□ -1.93
HMGB1P46-201ENST00000520062 K7EPK0 472 aa3.02□□□□□ -1.93
HMGB1P46-201ENST00000520062 MFNGO00587 321 aa3.02□□□□□ -1.93
HMGB1P46-201ENST00000520062 PDCD6O75340 191 aa3.02□□□□□ -1.93
HMGB1P46-201ENST00000520062 CXorf1O96002 111 aa3.02□□□□□ -1.93
HMGB1P46-201ENST00000520062 IGKV5-2P06315 115 aa3.02□□□□□ -1.93
HMGB1P46-201ENST00000520062 OR5AC1P0C628 307 aa3.02□□□□□ -1.93
HMGB1P46-201ENST00000520062 LIMS3P0CW19 117 aa3.02□□□□□ -1.93
HMGB1P46-201ENST00000520062 LIMS4P0CW20 117 aa3.02□□□□□ -1.93
HMGB1P46-201ENST00000520062 M6PRP20645 277 aa3.02□□□□□ -1.93
HMGB1P46-201ENST00000520062 PSMB6P28072 239 aa3.02□□□□□ -1.93
HMGB1P46-201ENST00000520062 PLTPP55058 493 aa3.02□□□□□ -1.93
HMGB1P46-201ENST00000520062 FAM162BQ5T6X4 162 aa3.02□□□□□ -1.93
HMGB1P46-201ENST00000520062 TMEM215Q68D42 235 aa3.02□□□□□ -1.93
HMGB1P46-201ENST00000520062 OR5AK3PQ8NH89 298 aa3.02□□□□□ -1.93
HMGB1P46-201ENST00000520062 FAM60AQ9NP50 221 aa3.02□□□□□ -1.93
HMGB1P46-201ENST00000520062 C1orf109Q9NX04 203 aa3.02□□□□□ -1.93
HMGB1P46-201ENST00000520062 SLC22A7Q9Y694 548 aa3.02□□□□□ -1.93
HMGB1P46-201ENST00000520062 TMEM131Q92545 1883 aa3.01□□□□□ -1.93
HMGB1P46-201ENST00000520062 IZUMO1RA6ND01 250 aa3.01□□□□□ -1.93
HMGB1P46-201ENST00000520062 C16orf90A8MZG2 172 aa3.01□□□□□ -1.93
HMGB1P46-201ENST00000520062 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P46-201ENST00000520062 UGT2B11O75310 529 aa3.01□□□□□ -1.93
HMGB1P46-201ENST00000520062 CA2P00918 260 aa3.01□□□□□ -1.93
HMGB1P46-201ENST00000520062 SCGB1C2P0DMR2 95 aa3.01□□□□□ -1.93
HMGB1P46-201ENST00000520062 TTMPQ5BVD1 217 aa3.01□□□□□ -1.93
HMGB1P46-201ENST00000520062 SPINT4Q6UDR6 99 aa3.01□□□□□ -1.93
HMGB1P46-201ENST00000520062 DGAT2L6Q6ZPD8 337 aa3.01□□□□□ -1.93
HMGB1P46-201ENST00000520062 USP50Q70EL3 339 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P46-201ENST00000520062 RNF182Q8N6D2 247 aa3.01□□□□□ -1.93
HMGB1P46-201ENST00000520062 SCGB1C1Q8TD33 95 aa3.01□□□□□ -1.93
HMGB1P46-201ENST00000520062 CASTOR1Q8WTX7 329 aa3.01□□□□□ -1.93
HMGB1P46-201ENST00000520062 DDIT4LQ96D03 193 aa3.01□□□□□ -1.93
HMGB1P46-201ENST00000520062 ASCL3Q9NQ33 180 aa3.01□□□□□ -1.93
HMGB1P46-201ENST00000520062 TRAV8-3A0A0A6YYJ7 113 aa3□□□□□ -1.93
HMGB1P46-201ENST00000520062 FAM183AA6NL82 134 aa3□□□□□ -1.93
HMGB1P46-201ENST00000520062 TOR1AO14656 332 aa3□□□□□ -1.93
HMGB1P46-201ENST00000520062 RGS5O15539 181 aa3□□□□□ -1.93
HMGB1P46-201ENST00000520062 SYNGR1O43759 233 aa3□□□□□ -1.93
HMGB1P46-201ENST00000520062 ENTPD6O75354 484 aa3□□□□□ -1.93
HMGB1P46-201ENST00000520062 IGLV7-43P04211 117 aa3□□□□□ -1.93
HMGB1P46-201ENST00000520062 RHOAP61586 193 aa3□□□□□ -1.93
HMGB1P46-201ENST00000520062 GOLGA7BQ2TAP0 167 aa3□□□□□ -1.93
HMGB1P46-201ENST00000520062 KHDRBS2Q5VWX1 349 aaKnown RBP3□□□□□ -1.93
HMGB1P46-201ENST00000520062 ZNF773Q6PK81 442 aa3□□□□□ -1.93
HMGB1P46-201ENST00000520062 TBPL2Q6SJ96 375 aa3□□□□□ -1.93
HMGB1P46-201ENST00000520062 DAZ4Q86SG3 579 aaKnown RBP3□□□□□ -1.93
HMGB1P46-201ENST00000520062 SLC25A45Q8N413 288 aa3□□□□□ -1.93
HMGB1P46-201ENST00000520062 DYNC2LI1Q8TCX1 351 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms