RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 ZNF91Q05481 1191 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 KLRD1Q13241 179 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 ALKBH1Q13686 389 aaKnown RBP7.64□□□□□ -1.19
HDAC3-215ENST00000519474 ODF1Q14990 250 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 HES5Q5TA89 166 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 CRIP3Q6Q6R5 217 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 RNF144BQ7Z419 303 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 LDLRAD3Q86YD5 345 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 PNKDQ8N490 385 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 TMEM86BQ8N661 226 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 MINDY2Q8NBR6 621 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 DNAAF1Q8NEP3 725 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 TMEM185AQ8NFB2 350 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 OR4M1Q8NGD0 313 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 OR10AC1Q8NH08 325 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 TBC1D15Q8TC07 691 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 APH1BQ8WW43 257 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 AJUBAQ96IF1 538 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 C4orf36Q96KX1 117 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 CHST5Q9GZS9 411 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 METTL8Q9H825 291 aaKnown RBP7.64□□□□□ -1.19
HDAC3-215ENST00000519474 SEBOXQ9HB31 216 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-215ENST00000519474 PLGRKTQ9HBL7 147 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 C19orf12Q9NSK7 152 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 C1RLQ9NZP8 487 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 POLDIP2Q9Y2S7 368 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 MMP24Q9Y5R2 645 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 POMT1Q9Y6A1 747 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 TRBV23-1A0A0A0MS06 115 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 LOC107986453A0A1B0GWG9 222 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 FAM172BPA6NC97 362 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 K7N7A8 449 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 NPFFO15130 113 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 MPZL2O60487 215 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 WBP4O75554 376 aaKnown RBP7.63□□□□□ -1.19
HDAC3-215ENST00000519474 KNG1P01042 644 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 IGHV4-59P01825 116 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 IGHA1P01876 353 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 CHRM2P08172 466 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 SNRNP70P08621 437 aaKnown RBP7.63□□□□□ -1.19
HDAC3-215ENST00000519474 HTR1AP08908 422 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 UBCP0CG48 685 aaKnown RBP7.63□□□□□ -1.19
HDAC3-215ENST00000519474 PTBP1P26599 531 aaKnown RBP eCLIP7.63□□□□□ -1.19
HDAC3-215ENST00000519474 NUP62P37198 522 aaPredicted RBP7.63□□□□□ -1.19
HDAC3-215ENST00000519474 NPBWR2P48146 333 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 RBP2P50120 134 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 CAPZA1P52907 286 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 ATP1B3P54709 279 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 RPL31P62899 125 aaKnown RBP7.63□□□□□ -1.19
HDAC3-215ENST00000519474 ACTC1P68032 377 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 ACTA1P68133 377 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 GUCA2AQ02747 115 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 COL10A1Q03692 680 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 SMIM21Q3B7S5 101 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 TM4SF20Q53R12 229 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 LPCAT4Q643R3 524 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 SHISA2Q6UWI4 295 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 SLC25A26Q70HW3 274 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 FAM220AQ7Z4H9 259 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 MKXQ8IYA7 352 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 OR52N4Q8NGI2 321 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 OR51A4Q8NGJ6 313 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 OR52I1Q8NGK6 324 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 SSMEM1Q8WWF3 244 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 PP6455Q8WZ26 134 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 SLAMF9Q96A28 289 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 BORCS8Q96FH0 119 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 Q96MT0 163 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 NEURL2Q9BR09 285 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 ERVK13-1Q9NX77 482 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 OR14J1Q9UGF5 321 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 DIMT1Q9UNQ2 313 aaKnown RBP7.63□□□□□ -1.19
HDAC3-215ENST00000519474 SF3B6Q9Y3B4 125 aaKnown RBP7.63□□□□□ -1.19
HDAC3-215ENST00000519474 FAM96BQ9Y3D0 163 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 PCDHGB5Q9Y5G0 923 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 STAB1Q9NY15 2570 aa7.63□□□□□ -1.19
HDAC3-215ENST00000519474 A0A1W2PQ09 198 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 TMEM82A0PJX8 343 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 ZNF98A6NK75 572 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 H0YAE9 185 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 SLC1A7O00341 560 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 ZNF737O75373 536 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 GATBO75879 557 aaKnown RBP7.62□□□□□ -1.19
HDAC3-215ENST00000519474 FADS2O95864 444 aaKnown RBP7.62□□□□□ -1.19
HDAC3-215ENST00000519474 CRYBA1P05813 215 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 CALCBP10092 127 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 CCL3L1P16619 93 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 EEF1B2P24534 225 aaKnown RBP7.62□□□□□ -1.19
HDAC3-215ENST00000519474 EIF2B2P49770 351 aaKnown RBP7.62□□□□□ -1.19
HDAC3-215ENST00000519474 DLX6P56179 175 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 MTCP1P56278 107 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 RPP30P78346 268 aaKnown RBP7.62□□□□□ -1.19
HDAC3-215ENST00000519474 PDZK1IP1Q13113 114 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 TAF9Q16594 264 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 SMN1Q16637 294 aaKnown RBP7.62□□□□□ -1.19
HDAC3-215ENST00000519474 KLHL22Q53GT1 634 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 C17orf107Q6ZR85 190 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 FAM185AQ8N0U4 392 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 SYS1Q8N2H4 156 aa7.62□□□□□ -1.19
HDAC3-215ENST00000519474 OR5D13Q8NGL4 314 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms