RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 SELEP16581 610 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 FUT3P21217 361 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 GLRXP35754 106 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 GZMKP49863 264 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 RPS23P62266 143 aaKnown RBP12.3□□□□□ -0.44
CLN8-204ENST00000519254 MSMPQ1L6U9 139 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 FAM76BQ5HYJ3 339 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 NHLRC3Q5JS37 347 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 WDR86Q86TI4 376 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 LRP11Q86VZ4 500 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 C1orf174Q8IYL3 243 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 MUC20Q8N307 709 aaPredicted RBP12.3□□□□□ -0.44
CLN8-204ENST00000519254 ZBTB8BQ8NAP8 495 aaPredicted RBP12.3□□□□□ -0.44
CLN8-204ENST00000519254 OR5H2Q8NGV7 314 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 DYRK2Q92630 601 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 PIK3IP1Q96FE7 263 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 PKIBQ9C010 78 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 FN3KRPQ9HA64 309 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 IL36RNQ9UBH0 155 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 PURGQ9UJV8 347 aaKnown RBP12.3□□□□□ -0.44
CLN8-204ENST00000519254 NPTNQ9Y639 398 aa12.3□□□□□ -0.44
CLN8-204ENST00000519254 OR4E1P0C645 316 aa12.29□□□□□ -0.44
CLN8-204ENST00000519254 TUBG1P23258 451 aa12.29□□□□□ -0.44
CLN8-204ENST00000519254 TAS2R46P59540 309 aa12.29□□□□□ -0.44
CLN8-204ENST00000519254 IL24Q13007 206 aa12.29□□□□□ -0.44
CLN8-204ENST00000519254 BEX5Q5H9J7 111 aa12.29□□□□□ -0.44
CLN8-204ENST00000519254 MBNL2Q5VZF2 373 aaKnown RBP12.29□□□□□ -0.44
CLN8-204ENST00000519254 C17orf107Q6ZR85 190 aa12.29□□□□□ -0.44
CLN8-204ENST00000519254 TMED4Q7Z7H5 227 aa12.29□□□□□ -0.44
CLN8-204ENST00000519254 ARRDC1Q8N5I2 433 aa12.29□□□□□ -0.44
CLN8-204ENST00000519254 SPICQ8N5J4 248 aa12.29□□□□□ -0.44
CLN8-204ENST00000519254 ZDHHC22Q8N966 263 aa12.29□□□□□ -0.44
CLN8-204ENST00000519254 OR5AP2Q8NGF4 316 aa12.29□□□□□ -0.44
CLN8-204ENST00000519254 TERB2Q8NHR7 220 aa12.29□□□□□ -0.44
CLN8-204ENST00000519254 CCDC107Q8WV48 283 aa12.29□□□□□ -0.44
CLN8-204ENST00000519254 TMEM171Q8WVE6 324 aa12.29□□□□□ -0.44
CLN8-204ENST00000519254 MICU1Q9BPX6 476 aa12.29□□□□□ -0.44
CLN8-204ENST00000519254 CMSS1Q9BQ75 279 aaKnown RBP12.29□□□□□ -0.44
CLN8-204ENST00000519254 TRAF4Q9BUZ4 470 aaPredicted RBP12.29□□□□□ -0.44
CLN8-204ENST00000519254 RTL8AQ9BWD3 113 aa12.29□□□□□ -0.44
CLN8-204ENST00000519254 TUBG2Q9NRH3 451 aa12.29□□□□□ -0.44
CLN8-204ENST00000519254 CA10Q9NS85 328 aa12.29□□□□□ -0.44
CLN8-204ENST00000519254 ZNF701Q9NV72 531 aaPredicted RBP12.29□□□□□ -0.44
CLN8-204ENST00000519254 NOP16Q9Y3C1 178 aaKnown RBP12.29□□□□□ -0.44
CLN8-204ENST00000519254 UBE2QL1A1L167 161 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 SIAH2O43255 324 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 RHBDL1O75783 438 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 OR7C1O76099 320 aaPredicted RBP12.28□□□□□ -0.44
CLN8-204ENST00000519254 PMELP40967 661 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 NUP37Q8NFH4 326 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 NEUROG1Q92886 237 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 ZNF488Q96MN9 340 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 ZNF436Q9C0F3 470 aaPredicted RBP12.28□□□□□ -0.44
CLN8-204ENST00000519254 SHISA9B4DS77 424 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 PRSS44E7EML9 344 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 C3orf80F5H4A9 247 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 H0YL77 283 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 J3QT63 122 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 SDCBPO00560 298 aaPredicted RBP12.28□□□□□ -0.44
CLN8-204ENST00000519254 PLAUP00749 431 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 FCGR3AP08637 254 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 ZNF250P15622 560 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 KITLGP21583 273 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 DTYMKP23919 212 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 OR3A3P47888 321 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 KLF3P57682 345 aaPredicted RBP12.28□□□□□ -0.44
CLN8-204ENST00000519254 CHRFAM7AQ494W8 412 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 C4orf46Q504U0 113 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 NLRC3Q7RTR2 1065 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 OVCH2Q7RTZ1 564 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 SLC25A42Q86VD7 318 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 DMRTC2Q8IXT2 367 aaPredicted RBP12.28□□□□□ -0.44
CLN8-204ENST00000519254 OR8G5Q8NG78 346 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 OR13G1Q8NGZ3 307 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 ZNF431Q8TF32 576 aaPredicted RBP12.28□□□□□ -0.44
CLN8-204ENST00000519254 ADAT1Q9BUB4 502 aaKnown RBP12.28□□□□□ -0.44
CLN8-204ENST00000519254 MRPL37Q9BZE1 423 aaKnown RBP12.28□□□□□ -0.44
CLN8-204ENST00000519254 MSL2Q9HCI7 577 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 DLL4Q9NR61 685 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 MGAT4CQ9UBM8 478 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 RNF115Q9Y4L5 304 aa12.28□□□□□ -0.44
CLN8-204ENST00000519254 ADGRG4Q8IZF6 3080 aa12.27□□□□□ -0.45
CLN8-204ENST00000519254 CHD3Q12873 2000 aaKnown RBP12.27□□□□□ -0.45
CLN8-204ENST00000519254 FAM221AA4D161 298 aa12.27□□□□□ -0.45
CLN8-204ENST00000519254 LRP5LA4QPB2 252 aa12.27□□□□□ -0.45
CLN8-204ENST00000519254 CEACAM18A8MTB9 384 aa12.27□□□□□ -0.45
CLN8-204ENST00000519254 DEFB108AA8MXU0 73 aa12.27□□□□□ -0.45
CLN8-204ENST00000519254 MLNRO43193 412 aa12.27□□□□□ -0.45
CLN8-204ENST00000519254 ERP29P30040 261 aaKnown RBP12.27□□□□□ -0.45
CLN8-204ENST00000519254 UBE2MP61081 183 aaKnown RBP12.27□□□□□ -0.45
CLN8-204ENST00000519254 TSPAN5P62079 268 aa12.27□□□□□ -0.45
CLN8-204ENST00000519254 C2orf68Q2NKX9 166 aa12.27□□□□□ -0.45
CLN8-204ENST00000519254 Q6ZPA2 131 aa12.27□□□□□ -0.45
CLN8-204ENST00000519254 LHFPL1Q86WI0 220 aa12.27□□□□□ -0.45
CLN8-204ENST00000519254 SCCPDHQ8NBX0 429 aa12.27□□□□□ -0.45
CLN8-204ENST00000519254 MARCH1Q8TCQ1 289 aa12.27□□□□□ -0.45
CLN8-204ENST00000519254 EHFQ9NZC4 300 aa12.27□□□□□ -0.45
CLN8-204ENST00000519254 RCC2Q9P258 522 aaKnown RBP12.27□□□□□ -0.45
CLN8-204ENST00000519254 EDARQ9UNE0 448 aa12.27□□□□□ -0.45
CLN8-204ENST00000519254 BOLA1Q9Y3E2 137 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms