RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 MIDNQ504T8 468 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 C9orf40Q8IXQ3 194 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 TCFL5Q9UL49 500 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 SSUH2Q9Y2M2 353 aa9.55□□□□□ -0.88
PCDHGA1-202ENST00000517417 CACNA1HO95180 2353 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 CTSBP07858 339 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 CCL3P10147 92 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 CD37P11049 281 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 BMP5P22003 454 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 PSMB3P49720 205 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 C3AR1Q16581 482 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 GAB4Q2WGN9 574 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 WDR74Q6RFH5 385 aaPredicted RBP9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 LINC00114Q6XXX2 140 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 SLC25A28Q96A46 364 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 SAT2Q96F10 170 aaPredicted RBP9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 AP1S3Q96PC3 154 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 UCN2Q96RP3 112 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 IGHV5-10-1A0A0J9YXX1 117 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 E5RGE8 158 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 CYB5BO43169 146 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 OR2C1O95371 312 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 VSIG8P0DPA2 414 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 RPS16P62249 146 aaKnown RBP9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 TRIP6Q15654 476 aaKnown RBP9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 MICBQ29980 383 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 IGSF11Q5DX21 431 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 LY6G6FQ5SQ64 297 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 STPG1Q5TH74 334 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 RPUSD3Q6P087 351 aaKnown RBP9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 SHISA5Q8N114 240 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 NRIP2Q9BQI9 281 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 NSG2Q9Y328 171 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 TP53BP1Q12888 1972 aaPredicted RBP9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 ZNF891A8MT65 544 aaPredicted RBP9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 G3V3Q6 166 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 LMX1BO60663 402 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 MUC1P15941 1255 aaPredicted RBP9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 SRD5A2P31213 254 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 GNG3P63215 75 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 EIF3IQ13347 325 aaKnown RBP9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 PNLIPRP3Q17RR3 467 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 LRP5LA4QPB2 252 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 LIPT2A6NK58 231 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 SOCS1O15524 211 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 APOA2P02652 100 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 PNLIPP16233 465 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 GUK1Q16774 197 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 RNF212Q495C1 297 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 KCNIP4Q6PIL6 250 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 C15orf54Q8N8G6 183 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 OR2Z1Q8NG97 314 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 ISOC2Q96AB3 205 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 FBXO17Q96EF6 278 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 PATZ1Q9HBE1 687 aaKnown RBP9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 FBXL17Q9UF56 701 aa9.54□□□□□ -0.88
PCDHGA1-202ENST00000517417 RNF222A6NCQ9 220 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 YIF1AO95070 293 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 MGST1P10620 155 aaKnown RBP9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 FSTP19883 344 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 ZNF83P51522 516 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 RAC3P60763 192 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 ZNF816Q0VGE8 651 aaPredicted RBP9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 OR10P1Q8NGE3 313 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 OR10X1Q8NGY0 326 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 CT55Q8WUE5 264 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 LHX4Q969G2 390 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 PINX1Q96BK5 328 aaKnown RBP9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 HELZP42694 1942 aaKnown RBP9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 ESPL1Q14674 2120 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 TOX3O15405 576 aaPredicted RBP9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 CDC14BO60729 498 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 PMP22Q01453 160 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 PRDX4Q13162 271 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 ZNF260Q3ZCT1 412 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 OR8B12Q8NGG6 310 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 TPPP3Q9BW30 176 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 PLEKHA2Q9HB19 425 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 MRPL22Q9NWU5 206 aaKnown RBP9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 ERRFI1Q9UJM3 462 aaPredicted RBP9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 MED12Q93074 2177 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 ZNF205O95201 554 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 DAOP14920 347 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 ZXDAP98168 799 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 DMWDQ09019 674 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 LILRB1Q8NHL6 650 aaPredicted RBP9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 GALMQ96C23 342 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 SPOCK3Q9BQ16 436 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 RSRP1Q9BUV0 290 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 PPP1R14DQ9NXH3 145 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 OR5AC2Q9NZP5 309 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 KCNK7Q9Y2U2 307 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 XIRP2A4UGR9 3374 aa9.53□□□□□ -0.88
PCDHGA1-202ENST00000517417 A0A1W2PPH5 198 aa9.52□□□□□ -0.88
PCDHGA1-202ENST00000517417 LINC01387J3KSC0 135 aa9.52□□□□□ -0.88
PCDHGA1-202ENST00000517417 CD74P04233 296 aa9.52□□□□□ -0.88
PCDHGA1-202ENST00000517417 RCC1P18754 421 aaPredicted RBP9.52□□□□□ -0.88
PCDHGA1-202ENST00000517417 GNB1P62873 340 aa9.52□□□□□ -0.88
PCDHGA1-202ENST00000517417 NAAAQ02083 359 aa9.52□□□□□ -0.88
PCDHGA1-202ENST00000517417 EGR4Q05215 589 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms