RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 ZNF785A8K8V0 405 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 LANCL1O43813 399 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 RPS4Y1P22090 263 aaKnown RBP11.79□□□□□ -0.52
TCOF1-214ENST00000515035 GFERP55789 205 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 ZNF117Q03924 483 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 GUCA2BQ16661 112 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 DHRS13Q6UX07 377 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 MCHR2Q969V1 340 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 ZNF707Q96C28 371 aaPredicted RBP11.79□□□□□ -0.52
TCOF1-214ENST00000515035 SMIM12Q96EX1 92 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 DOCK1Q14185 1865 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 MYO7AQ13402 2215 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 RBP4P02753 201 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 NMBP08949 121 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 PSMB2P49721 201 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 GAMTQ14353 236 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 NRIP2Q9BQI9 281 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 MAP1LC3CQ9BXW4 147 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 ANXA10Q9UJ72 324 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 ZNF391Q9UJN7 358 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 PSG11Q9UQ72 335 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 SHISA8B8ZZ34 492 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 ERVH48-1M5A8F1 160 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 OR1L6Q8NGR2 347 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 TP53RKQ96S44 253 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 SH2D2AQ9NP31 389 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 CA10Q9NS85 328 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 CHST1O43916 411 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 CBR3O75828 277 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 ZNF345Q14585 488 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 IGFBP7Q16270 282 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 FNDC7Q5VTL7 733 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 MRPL54Q6P161 138 aaKnown RBP11.79□□□□□ -0.52
TCOF1-214ENST00000515035 TRAT1Q6PIZ9 186 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 AMER3Q8N944 861 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 OR2V1Q8NHB1 315 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 WDR13Q9H1Z4 485 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 RNF24Q9Y225 148 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 KLF13Q9Y2Y9 288 aaPredicted RBP11.79□□□□□ -0.52
TCOF1-214ENST00000515035 ATP23Q9Y6H3 246 aa11.79□□□□□ -0.52
TCOF1-214ENST00000515035 KIAA1551Q9HCM1 1747 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 ZGLP1P0C6A0 271 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 CTLA4P16410 223 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 BCL3P20749 454 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 IRF3Q14653 427 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 OR1C1Q15619 314 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 RPS4Y2Q8TD47 263 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 RALYQ9UKM9 306 aaKnown RBP11.78□□□□□ -0.52
TCOF1-214ENST00000515035 FGF2P09038 288 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 YBX1P67809 324 aaKnown RBP11.78□□□□□ -0.52
TCOF1-214ENST00000515035 UBE2L3P68036 154 aaKnown RBP11.78□□□□□ -0.52
TCOF1-214ENST00000515035 ARAP2Q8WZ64 1704 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 MRPL24Q96A35 216 aaKnown RBP11.78□□□□□ -0.52
TCOF1-214ENST00000515035 NEU3Q9UQ49 428 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 LOXL2Q9Y4K0 774 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 DEFB108AA8MXU0 73 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 ADAM11O75078 769 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 VDAC1P21796 283 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 HLA-BQ31612 363 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 KHDC1LQ5JSQ8 128 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 MRGPRGQ86SM5 289 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 BPIFA4PQ86YQ2 179 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 PECRQ9BY49 303 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 TNFSF18Q9UNG2 199 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 PROCRQ9UNN8 238 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 EVPLQ92817 2033 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 SEC11BP0C7V7 166 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 GABRG2P18507 467 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 LSM11P83369 360 aaKnown RBP eCLIP11.78□□□□□ -0.52
TCOF1-214ENST00000515035 PUSL1Q8N0Z8 303 aaKnown RBP11.78□□□□□ -0.52
TCOF1-214ENST00000515035 SPACA9Q96E40 222 aaPredicted RBP11.78□□□□□ -0.52
TCOF1-214ENST00000515035 ZPBPQ9BS86 351 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 TMEM167BQ9NRX6 74 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 DOK5Q9P104 306 aa11.78□□□□□ -0.52
TCOF1-214ENST00000515035 SNURFLB1AK76 121 aa11.77□□□□□ -0.52
TCOF1-214ENST00000515035 M0R1B8 84 aa11.77□□□□□ -0.52
TCOF1-214ENST00000515035 RAB29O14966 203 aa11.77□□□□□ -0.52
TCOF1-214ENST00000515035 FAM74A3Q4VXF1 159 aa11.77□□□□□ -0.52
TCOF1-214ENST00000515035 SCGB1D4Q6XE38 83 aa11.77□□□□□ -0.52
TCOF1-214ENST00000515035 TMEM116Q8NCL8 245 aa11.77□□□□□ -0.52
TCOF1-214ENST00000515035 CADM4Q8NFZ8 388 aa11.77□□□□□ -0.52
TCOF1-214ENST00000515035 FBLL1A6NHQ2 334 aaKnown RBP11.77□□□□□ -0.53
TCOF1-214ENST00000515035 TBC1D26Q86UD7 250 aa11.77□□□□□ -0.53
TCOF1-214ENST00000515035 OR2D2Q9H210 308 aa11.77□□□□□ -0.53
TCOF1-214ENST00000515035 SERTM1A2A2V5 107 aa11.77□□□□□ -0.53
TCOF1-214ENST00000515035 DIRC3C9JPN6 131 aa11.77□□□□□ -0.53
TCOF1-214ENST00000515035 LMO7DNF2Z398 122 aa11.77□□□□□ -0.53
TCOF1-214ENST00000515035 IL2RAP01589 272 aa11.77□□□□□ -0.53
TCOF1-214ENST00000515035 IER3P46695 156 aa11.77□□□□□ -0.53
TCOF1-214ENST00000515035 EWSR1Q01844 656 aaKnown RBP eCLIP11.77□□□□□ -0.53
TCOF1-214ENST00000515035 LYG1Q8N1E2 194 aa11.77□□□□□ -0.53
TCOF1-214ENST00000515035 CHAC2Q8WUX2 184 aa11.77□□□□□ -0.53
TCOF1-214ENST00000515035 GPX7Q96SL4 187 aaPredicted RBP11.77□□□□□ -0.53
TCOF1-214ENST00000515035 P4HTMQ9NXG6 502 aa11.77□□□□□ -0.53
TCOF1-214ENST00000515035 SIPA1L3O60292 1781 aaPredicted RBP11.77□□□□□ -0.53
TCOF1-214ENST00000515035 MEX3AA1L020 520 aaKnown RBP11.77□□□□□ -0.53
TCOF1-214ENST00000515035 ZNF385CQ66K41 422 aaPredicted RBP11.77□□□□□ -0.53
TCOF1-214ENST00000515035 Q6ZS52 159 aa11.77□□□□□ -0.53
TCOF1-214ENST00000515035 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.77□□□□□ -0.53
TCOF1-214ENST00000515035 CXorf67Q86X51 503 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms