RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 VCX3AQ9NNX9 186 aa2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 RMND1Q9NWS8 449 aa2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 SSH2Q76I76 1423 aa2.26□□□□□ -2.05
HMGCS1-207ENST00000514610 IGHV3-21A0A0B4J1V1 117 aa2.26□□□□□ -2.05
HMGCS1-207ENST00000514610 A8MWP4 228 aa2.26□□□□□ -2.05
HMGCS1-207ENST00000514610 UPK2O00526 184 aa2.26□□□□□ -2.05
HMGCS1-207ENST00000514610 IGHV3-53P01767 116 aa2.26□□□□□ -2.05
HMGCS1-207ENST00000514610 STX4Q12846 297 aa2.26□□□□□ -2.05
HMGCS1-207ENST00000514610 UBE2NLQ5JXB2 153 aa2.26□□□□□ -2.05
HMGCS1-207ENST00000514610 GLYATQ6IB77 296 aa2.26□□□□□ -2.05
HMGCS1-207ENST00000514610 MARCH3Q86UD3 253 aa2.26□□□□□ -2.05
HMGCS1-207ENST00000514610 COMTD1Q86VU5 262 aa2.26□□□□□ -2.05
HMGCS1-207ENST00000514610 CYP4Z1Q86W10 505 aa2.26□□□□□ -2.05
HMGCS1-207ENST00000514610 LGALS14Q8TCE9 139 aa2.26□□□□□ -2.05
HMGCS1-207ENST00000514610 BLNKQ8WV28 456 aa2.26□□□□□ -2.05
HMGCS1-207ENST00000514610 ZNF75AQ96N20 296 aa2.26□□□□□ -2.05
HMGCS1-207ENST00000514610 YPEL4Q96NS1 127 aa2.26□□□□□ -2.05
HMGCS1-207ENST00000514610 HINT2Q9BX68 163 aa2.26□□□□□ -2.05
HMGCS1-207ENST00000514610 TSGA10Q9BZW7 698 aa2.26□□□□□ -2.05
HMGCS1-207ENST00000514610 NXF2Q9GZY0 626 aaKnown RBP2.26□□□□□ -2.05
HMGCS1-207ENST00000514610 ABCG5Q9H222 651 aa2.26□□□□□ -2.05
HMGCS1-207ENST00000514610 RBMX2Q9Y388 322 aaKnown RBP2.26□□□□□ -2.05
HMGCS1-207ENST00000514610 NACADO15069 1562 aa2.26□□□□□ -2.05
HMGCS1-207ENST00000514610 E7EWF7 191 aa2.25□□□□□ -2.05
HMGCS1-207ENST00000514610 IGKV5-2P06315 115 aa2.25□□□□□ -2.05
HMGCS1-207ENST00000514610 CECR9P0C854 216 aa2.25□□□□□ -2.05
HMGCS1-207ENST00000514610 XKP51811 444 aa2.25□□□□□ -2.05
HMGCS1-207ENST00000514610 TNFRSF9Q07011 255 aa2.25□□□□□ -2.05
HMGCS1-207ENST00000514610 SMARCD3Q6STE5 483 aa2.25□□□□□ -2.05
HMGCS1-207ENST00000514610 DRAXINQ8NBI3 349 aaPredicted RBP2.25□□□□□ -2.05
HMGCS1-207ENST00000514610 OR2M3Q8NG83 312 aa2.25□□□□□ -2.05
HMGCS1-207ENST00000514610 DNAJC27Q9NZQ0 273 aa2.25□□□□□ -2.05
HMGCS1-207ENST00000514610 SLC22A14Q9Y267 594 aa2.25□□□□□ -2.05
HMGCS1-207ENST00000514610 ZNF443Q9Y2A4 671 aaPredicted RBP2.25□□□□□ -2.05
HMGCS1-207ENST00000514610 TRAPPC1Q9Y5R8 145 aa2.25□□□□□ -2.05
HMGCS1-207ENST00000514610 NUP205Q92621 2012 aa2.25□□□□□ -2.05
HMGCS1-207ENST00000514610 IGLV10-54A0A075B6I4 117 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 A0A0B4J2C4 111 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 MGAT4DA6NG13 374 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 D6RAR5 112 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 F5H5P2 479 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 K7ERS5 55 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 AQP9O43315 295 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 ZMPSTE24O75844 475 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 SOD3P08294 240 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 ZNF708P17019 499 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 NUP62P37198 522 aaPredicted RBP2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 CCL23P55773 120 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 BNIP2Q12982 314 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 VAMP3Q15836 100 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 TMEM215Q68D42 235 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 ERICH5Q6P6B1 374 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 DPPA2Q7Z7J5 298 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 LRP11Q86VZ4 500 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 RPRMLQ8N4K4 120 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 EIF4E3Q8N5X7 224 aaKnown RBP2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 OR6K3Q8NGY3 331 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 CMTM2Q8TAZ6 248 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 COPS4Q9BT78 406 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 PRRG3Q9BZD7 231 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 PLEKHA1Q9HB21 404 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 CLEC2DQ9UHP7 191 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 NOS1P29475 1434 aa2.24□□□□□ -2.05
HMGCS1-207ENST00000514610 MYBPHLA2RUH7 354 aa2.23□□□□□ -2.05
HMGCS1-207ENST00000514610 CD300LBA8K4G0 201 aa2.23□□□□□ -2.05
HMGCS1-207ENST00000514610 GGTLC3B5MD39 225 aa2.23□□□□□ -2.05
HMGCS1-207ENST00000514610 IL12BP29460 328 aa2.23□□□□□ -2.05
HMGCS1-207ENST00000514610 RANBP1P43487 201 aa2.23□□□□□ -2.05
HMGCS1-207ENST00000514610 LGALS7P47929 136 aa2.23□□□□□ -2.05
HMGCS1-207ENST00000514610 LGALSLQ3ZCW2 172 aaPredicted RBP2.23□□□□□ -2.05
HMGCS1-207ENST00000514610 TTMPQ5BVD1 217 aa2.23□□□□□ -2.05
HMGCS1-207ENST00000514610 CYHR1Q6ZMK1 362 aa2.23□□□□□ -2.05
HMGCS1-207ENST00000514610 LYPD6Q86Y78 171 aa2.23□□□□□ -2.05
HMGCS1-207ENST00000514610 MAL2Q969L2 176 aa2.23□□□□□ -2.05
HMGCS1-207ENST00000514610 CPB2Q96IY4 423 aa2.23□□□□□ -2.05
HMGCS1-207ENST00000514610 GLT1D1Q96MS3 346 aa2.23□□□□□ -2.05
HMGCS1-207ENST00000514610 BIRC8Q96P09 236 aa2.23□□□□□ -2.05
HMGCS1-207ENST00000514610 LINC01587Q99440 93 aa2.23□□□□□ -2.05
HMGCS1-207ENST00000514610 CIB1Q99828 191 aa2.23□□□□□ -2.05
HMGCS1-207ENST00000514610 GABARAPL1Q9H0R8 117 aa2.23□□□□□ -2.05
HMGCS1-207ENST00000514610 PLXNB1O43157 2135 aa2.23□□□□□ -2.05
HMGCS1-207ENST00000514610 VWA8A3KMH1 1905 aa2.23□□□□□ -2.05
HMGCS1-207ENST00000514610 NRCAMQ92823 1304 aa2.22□□□□□ -2.05
HMGCS1-207ENST00000514610 LEUTXA8MZ59 168 aa2.22□□□□□ -2.05
HMGCS1-207ENST00000514610 H3BMM0 161 aa2.22□□□□□ -2.05
HMGCS1-207ENST00000514610 NDUFS8O00217 210 aa2.22□□□□□ -2.05
HMGCS1-207ENST00000514610 MYO1DO94832 1006 aa2.22□□□□□ -2.05
HMGCS1-207ENST00000514610 CCNOP22674 350 aa2.22□□□□□ -2.05
HMGCS1-207ENST00000514610 CNTFRP26992 372 aa2.22□□□□□ -2.05
HMGCS1-207ENST00000514610 GCLMP48507 274 aa2.22□□□□□ -2.05
HMGCS1-207ENST00000514610 RAB38P57729 211 aa2.22□□□□□ -2.05
HMGCS1-207ENST00000514610 C18orf21Q32NC0 220 aaPredicted RBP2.22□□□□□ -2.05
HMGCS1-207ENST00000514610 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
HMGCS1-207ENST00000514610 C3orf22Q8N5N4 141 aa2.22□□□□□ -2.05
HMGCS1-207ENST00000514610 OR2AE1Q8NHA4 323 aa2.22□□□□□ -2.05
HMGCS1-207ENST00000514610 ZNF75CPQ92670 426 aaPredicted RBP2.22□□□□□ -2.05
HMGCS1-207ENST00000514610 UBE2WQ96B02 151 aa2.22□□□□□ -2.05
HMGCS1-207ENST00000514610 ANAPC13Q9BS18 74 aa2.22□□□□□ -2.05
HMGCS1-207ENST00000514610 RAB1BQ9H0U4 201 aa2.22□□□□□ -2.05
HMGCS1-207ENST00000514610 CYB5R1Q9UHQ9 305 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms