RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 OCM2P0CE71 109 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 OCMP0CE72 109 aaPredicted RBP8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 CALCBP10092 127 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 KIR2DS4P43632 304 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 SNU13P55769 128 aaKnown RBP8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 P2RX3P56373 397 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 ZP1P60852 638 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 C11orf88Q6PI97 169 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 PARP16Q8N5Y8 322 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 OR52I1Q8NGK6 324 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 OR5D18Q8NGL1 313 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 HAVCR2Q8TDQ0 301 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 MALSU1Q96EH3 234 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 RDH12Q96NR8 316 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 CDCA4Q9BXL8 241 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 NPFFR1Q9GZQ6 430 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 TMEM133Q9H2Q1 129 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 AMBNQ9NP70 447 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 GLS2Q9UI32 602 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 TCF19Q9Y242 345 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 GSTK1Q9Y2Q3 226 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 SIGLEC9Q9Y336 463 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 RPL36Q9Y3U8 105 aaKnown RBP8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 A6NDX4 124 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 SH2D1BO14796 132 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 WBP4O75554 376 aaKnown RBP8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 CSN2P05814 226 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 HCKP08631 526 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 LIMS3P0CW19 117 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 LIMS4P0CW20 117 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 LMO1P25800 156 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 DYNLT3P51808 116 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 HERPUD1Q15011 391 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 KISS1Q15726 138 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 FAM189A2Q15884 450 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 ZSCAN26Q16670 478 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 C2orf68Q2NKX9 166 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 PLA1AQ53H76 456 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 MINOS1Q5TGZ0 78 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 LPCAT4Q643R3 524 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 ZNF529Q6P280 563 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 Q6P435 159 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 SERPINA12Q8IW75 414 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 OR5D14Q8NGL3 314 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 OR5AK2Q8NH90 309 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 OR2T6Q8NHC8 308 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 RPS4Y2Q8TD47 263 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 RGP1Q92546 391 aaPredicted RBP8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 PDCD1LG2Q9BQ51 273 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 ZNF702PQ9H963 129 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 NEK6Q9HC98 313 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 FGF20Q9NP95 211 aaPredicted RBP8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 SMPD3Q9NY59 655 aaPredicted RBP8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 DHDHQ9UQ10 334 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 UBE2J1Q9Y385 318 aaPredicted RBP8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 PCDHGB5Q9Y5G0 923 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 MINOS1-NBL1R4GNA1 71 aa8.44□□□□□ -1.06
HMGXB3-205ENST00000514469 SLC33A1O00400 549 aaPredicted RBP8.43□□□□□ -1.06
HMGXB3-205ENST00000514469 MMP23AO75900 390 aa8.43□□□□□ -1.06
HMGXB3-205ENST00000514469 GBX2P52951 348 aaPredicted RBP8.43□□□□□ -1.06
HMGXB3-205ENST00000514469 DEFA6Q01524 100 aa8.43□□□□□ -1.06
HMGXB3-205ENST00000514469 DYNC1I2Q13409 638 aaKnown RBP8.43□□□□□ -1.06
HMGXB3-205ENST00000514469 IL18R1Q13478 541 aa8.43□□□□□ -1.06
HMGXB3-205ENST00000514469 SSX2Q16385 188 aa8.43□□□□□ -1.06
HMGXB3-205ENST00000514469 SMN1Q16637 294 aaKnown RBP8.43□□□□□ -1.06
HMGXB3-205ENST00000514469 KLHL22Q53GT1 634 aa8.43□□□□□ -1.06
HMGXB3-205ENST00000514469 CCBE1Q6UXH8 406 aaPredicted RBP8.43□□□□□ -1.06
HMGXB3-205ENST00000514469 TRAPPC6BQ86SZ2 158 aa8.43□□□□□ -1.06
HMGXB3-205ENST00000514469 Q8N2B8 174 aa8.43□□□□□ -1.06
HMGXB3-205ENST00000514469 KLHDC1Q8N7A1 406 aa8.43□□□□□ -1.06
HMGXB3-205ENST00000514469 CHST4Q8NCG5 386 aa8.43□□□□□ -1.06
HMGXB3-205ENST00000514469 OR4P4Q8NGL7 312 aa8.43□□□□□ -1.06
HMGXB3-205ENST00000514469 TSEN15Q8WW01 171 aaKnown RBP8.43□□□□□ -1.06
HMGXB3-205ENST00000514469 CFHR4Q92496 578 aa8.43□□□□□ -1.06
HMGXB3-205ENST00000514469 CORO2AQ92828 525 aa8.43□□□□□ -1.06
HMGXB3-205ENST00000514469 CLEC7AQ9BXN2 247 aa8.43□□□□□ -1.06
HMGXB3-205ENST00000514469 GAL3ST2Q9H3Q3 398 aa8.43□□□□□ -1.06
HMGXB3-205ENST00000514469 ABCB10Q9NRK6 738 aa8.43□□□□□ -1.06
HMGXB3-205ENST00000514469 TAS2R3Q9NYW6 316 aa8.43□□□□□ -1.06
HMGXB3-205ENST00000514469 PITPNC1Q9UKF7 332 aa8.43□□□□□ -1.06
HMGXB3-205ENST00000514469 FOXJ3Q9UPW0 622 aa8.43□□□□□ -1.06
HMGXB3-205ENST00000514469 TRGV10A0A0A0MS01 117 aa8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 A0A0G2JK05 382 aa8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 FUOMA2VDF0 154 aa8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 F2RL2O00254 374 aa8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 GABRPO00591 440 aa8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 ZNF44P15621 663 aa8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 JUNBP17275 347 aaPredicted RBP8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 GLIPR1P48060 266 aa8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 MTNR1BP49286 362 aa8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 RAB13P51153 203 aa8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 GTF2A1P52655 376 aaPredicted RBP8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 AESQ08117 197 aa8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 CDK5R1Q15078 307 aa8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 CCDC58Q4VC31 144 aa8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 PDLIM3Q53GG5 364 aaPredicted RBP8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 PRAMEF5Q5TYX0 476 aa8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 ZNF691Q5VV52 312 aa8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 XAF1Q6GPH4 301 aa8.42□□□□□ -1.06
HMGXB3-205ENST00000514469 ELP2Q6IA86 826 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms