RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 ZNF418Q8TF45 676 aaPredicted RBP6.77□□□□□ -1.33
NEDD4-210ENST00000513957 PHYHIPQ92561 330 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 UFD1Q92890 307 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 SLAMF9Q96A28 289 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 WDFY2Q96P53 400 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 SUCNR1Q9BXA5 334 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 UNKLQ9H9P5 680 aaKnown RBP6.77□□□□□ -1.33
NEDD4-210ENST00000513957 ZMAT3Q9HA38 289 aaKnown RBP6.77□□□□□ -1.33
NEDD4-210ENST00000513957 SNTG1Q9NSN8 517 aa6.77□□□□□ -1.33
NEDD4-210ENST00000513957 LSM2Q9Y333 95 aaKnown RBP6.77□□□□□ -1.33
NEDD4-210ENST00000513957 TRBV5-7A0A0A0MS05 114 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 hCG_1809904A0A1W2PP81 198 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 A0A1W2PPE2 198 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 A0A1W2PR64 198 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 A0A1W2PRV1 198 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 K7N7A8 449 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 RRP9O43818 475 aaKnown RBP6.76□□□□□ -1.33
NEDD4-210ENST00000513957 TOX4O94842 621 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 PLATP00750 562 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 RBP4P02753 201 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 TK1P04183 234 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 CSN2P05814 226 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 MMP9P14780 707 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 NDUFB7P17568 137 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 IGFBP3P17936 291 aaPredicted RBP6.76□□□□□ -1.33
NEDD4-210ENST00000513957 BDKRB2P30411 391 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 SOX2P48431 317 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 ZP1P60852 638 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 GMFBP60983 142 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 FGF12P61328 243 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 RPS11P62280 158 aaKnown RBP eCLIP6.76□□□□□ -1.33
NEDD4-210ENST00000513957 GPR176Q14439 515 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 MED22Q15528 200 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 DDI2Q5TDH0 399 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 GPR157Q5UAW9 335 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 NCR3LG1Q68D85 454 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 IL17RELQ6ZVW7 336 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 ZNF367Q7RTV3 350 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 LINC00596Q86U02 117 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 BPIFB2Q8N4F0 458 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 SVOPQ8N4V2 548 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 Q8NFD4 153 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 OR5T2Q8NGG2 359 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 SEH1LQ96EE3 360 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 SNX22Q96L94 193 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 DERL3Q96Q80 235 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 GPER1Q99527 375 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 METTL8Q9H825 291 aaKnown RBP6.76□□□□□ -1.33
NEDD4-210ENST00000513957 HMG20AQ9NP66 347 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 TAS2R4Q9NYW5 299 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 IL36GQ9NZH8 169 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 MAB21L2Q9Y586 359 aa6.76□□□□□ -1.33
NEDD4-210ENST00000513957 SIRT4Q9Y6E7 314 aaPredicted RBP6.76□□□□□ -1.33
NEDD4-210ENST00000513957 JMJD1CQ15652 2540 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 A0A087X0M5 115 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 TRAV40A0A0B4J280 105 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 A0A1B0GX30 115 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 A0A1W2PQ09 198 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 FUOMA2VDF0 154 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 H3BUI4 141 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 SH2D1BO14796 132 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 ZNF737O75373 536 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 FCN3O75636 299 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 SC5DO75845 299 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 INMTO95050 263 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 HAND1O96004 215 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 TMEM225BP0DP42 221 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 PRKACAP17612 351 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 BCL3P20749 454 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 EEF1B2P24534 225 aaKnown RBP6.75□□□□□ -1.33
NEDD4-210ENST00000513957 LMO1P25800 156 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 ERP29P30040 261 aaKnown RBP6.75□□□□□ -1.33
NEDD4-210ENST00000513957 ZNF93P35789 620 aaPredicted RBP6.75□□□□□ -1.33
NEDD4-210ENST00000513957 KCNJ3P48549 501 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 CAPZA1P52907 286 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 HILS1P60008 231 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 PAX5Q02548 391 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 MEF2CQ06413 473 aaPredicted RBP6.75□□□□□ -1.33
NEDD4-210ENST00000513957 TPBGQ13641 420 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 IL13RA2Q14627 380 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 NHLRC3Q5JS37 347 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 ASPHD2Q6ICH7 369 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 CRIP3Q6Q6R5 217 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 ASCL4Q6XD76 172 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 RBMS3Q6XE24 437 aaKnown RBP6.75□□□□□ -1.33
NEDD4-210ENST00000513957 GDPD3Q7L5L3 318 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 CD177Q8N6Q3 437 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 ZNRF1Q8ND25 227 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 OR51A2Q8NGJ7 313 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 OR51T1Q8NGJ9 327 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 TMEM158Q8WZ71 300 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 H1FXQ92522 213 aaKnown RBP6.75□□□□□ -1.33
NEDD4-210ENST00000513957 FCGR1BQ92637 280 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 MUL1Q969V5 352 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 FOXRED1Q96CU9 486 aaPredicted RBP6.75□□□□□ -1.33
NEDD4-210ENST00000513957 MRPS24Q96EL2 167 aaKnown RBP6.75□□□□□ -1.33
NEDD4-210ENST00000513957 ZNF488Q96MN9 340 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 OR14A2Q96R54 314 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 S100A13Q99584 98 aa6.75□□□□□ -1.33
NEDD4-210ENST00000513957 CHCHD6Q9BRQ6 235 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms