RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 GP2P55259 537 aaKnown RBP7.92□□□□□ -1.14
RNF4-221ENST00000513643 ERVFRD-1P60508 538 aa7.92□□□□□ -1.14
RNF4-221ENST00000513643 PAX5Q02548 391 aa7.92□□□□□ -1.14
RNF4-221ENST00000513643 GUCA2AQ02747 115 aa7.92□□□□□ -1.14
RNF4-221ENST00000513643 GPR50Q13585 617 aa7.92□□□□□ -1.14
RNF4-221ENST00000513643 NHLRC3Q5JS37 347 aa7.92□□□□□ -1.14
RNF4-221ENST00000513643 NCR3LG1Q68D85 454 aa7.92□□□□□ -1.14
RNF4-221ENST00000513643 C16orf87Q6PH81 154 aa7.92□□□□□ -1.14
RNF4-221ENST00000513643 CDH26Q8IXH8 852 aa7.92□□□□□ -1.14
RNF4-221ENST00000513643 STX19Q8N4C7 294 aa7.92□□□□□ -1.14
RNF4-221ENST00000513643 ZFP41Q8N8Y5 198 aa7.92□□□□□ -1.14
RNF4-221ENST00000513643 OR4M1Q8NGD0 313 aa7.92□□□□□ -1.14
RNF4-221ENST00000513643 OR5D18Q8NGL1 313 aa7.92□□□□□ -1.14
RNF4-221ENST00000513643 TSEN15Q8WW01 171 aaKnown RBP7.92□□□□□ -1.14
RNF4-221ENST00000513643 CORO2AQ92828 525 aa7.92□□□□□ -1.14
RNF4-221ENST00000513643 NCOR1P1Q9H4R4 102 aa7.92□□□□□ -1.14
RNF4-221ENST00000513643 IFT22Q9H7X7 185 aa7.92□□□□□ -1.14
RNF4-221ENST00000513643 IL36GQ9NZH8 169 aa7.92□□□□□ -1.14
RNF4-221ENST00000513643 POMT1Q9Y6A1 747 aa7.92□□□□□ -1.14
RNF4-221ENST00000513643 TRAV8-7A0A075B6U6 113 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 A0A1W2PQ09 198 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 MEGF11A6BM72 1044 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 MAGEA13PA6NCF6 341 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 SLC33A1O00400 549 aaPredicted RBP7.91□□□□□ -1.14
RNF4-221ENST00000513643 SH2D1BO14796 132 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 MGST3O14880 152 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 HOXA3O43365 443 aaPredicted RBP7.91□□□□□ -1.14
RNF4-221ENST00000513643 INMTO95050 263 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 ATP6V1G2O95670 118 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 TMEM225BP0DP42 221 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 CCL3L1P16619 93 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 PRKACAP17612 351 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 CELP19835 753 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 CRHBPP24387 322 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 BMXP51813 675 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 PRB3Q04118 309 aaPredicted RBP7.91□□□□□ -1.14
RNF4-221ENST00000513643 KLRD1Q13241 179 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 MIDNQ504T8 468 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 FAM185AQ8N0U4 392 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 CHST4Q8NCG5 386 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 OR11H6Q8NGC7 330 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 SSMEM1Q8WWF3 244 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 MYDGFQ969H8 173 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 SLC25A28Q96A46 364 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 ORAI1Q96D31 301 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 DUX5Q96PT3 197 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 DERL3Q96Q80 235 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 OR5M11Q96RB7 305 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 MEGF9Q9H1U4 602 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 LINC00574Q9H8X3 128 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 ZNRD1Q9P1U0 126 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 FOXJ3Q9UPW0 622 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 ERGIC3Q9Y282 383 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 SF3B6Q9Y3B4 125 aaKnown RBP7.91□□□□□ -1.14
RNF4-221ENST00000513643 LINC00312Q9Y6C7 94 aa7.91□□□□□ -1.14
RNF4-221ENST00000513643 VWFP04275 2813 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 TRAV24A0A0B4J272 114 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 A0A1W2PPH5 198 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 ODF3BA8MYP8 253 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 PTGES3LE9PB15 166 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 HCKP08631 526 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 ZNF728P0DKX0 622 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 CALCBP10092 127 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 BDKRB2P30411 391 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 SAA4P35542 130 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 ZNF93P35789 620 aaPredicted RBP7.9□□□□□ -1.14
RNF4-221ENST00000513643 TGFBR2P37173 567 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 OR3A4PP47883 348 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 HSPA13P48723 471 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 CAPZA1P52907 286 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 P2RX3P56373 397 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 RPL15P61313 204 aaKnown RBP7.9□□□□□ -1.14
RNF4-221ENST00000513643 RELBQ01201 579 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 TPBGQ13641 420 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 BLMHQ13867 455 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 IL13RA2Q14627 380 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 SPHARQ15513 63 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 AANATQ16613 207 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 LDLRAD2Q5SZI1 272 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 FIP1L1Q6UN15 594 aaKnown RBP7.9□□□□□ -1.14
RNF4-221ENST00000513643 IZUMO2Q6UXV1 221 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 PDZD9Q8IXQ8 264 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 PNKDQ8N490 385 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 ASCC1Q8N9N2 400 aaKnown RBP7.9□□□□□ -1.14
RNF4-221ENST00000513643 BEND2Q8NDZ0 799 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 PIFOQ8TCI5 191 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 C17orf50Q8WW18 174 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 CPNE2Q96FN4 548 aaPredicted RBP7.9□□□□□ -1.14
RNF4-221ENST00000513643 COQ2Q96H96 371 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 OR14A2Q96R54 314 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 MND1Q9BWT6 205 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 CHIAQ9BZP6 476 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 VCX3BQ9H321 246 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 HEXA-AS1Q9H8Q6 139 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 EXOSC4Q9NPD3 245 aaKnown RBP7.9□□□□□ -1.14
RNF4-221ENST00000513643 ISYNA1Q9NPH2 558 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 SCN3BQ9NY72 215 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 RAB26Q9ULW5 256 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 GSTK1Q9Y2Q3 226 aa7.9□□□□□ -1.14
RNF4-221ENST00000513643 MMP24Q9Y5R2 645 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms