RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 NCR3LG1Q68D85 454 aa13.05□□□□□ -0.32
DDX41-214ENST00000512334 METAP1DQ6UB28 335 aaPredicted RBP13.05□□□□□ -0.32
DDX41-214ENST00000512334 C17orf107Q6ZR85 190 aa13.05□□□□□ -0.32
DDX41-214ENST00000512334 C1orf122Q6ZSJ8 110 aa13.05□□□□□ -0.32
DDX41-214ENST00000512334 PPP1R35Q8TAP8 253 aa13.05□□□□□ -0.32
DDX41-214ENST00000512334 OR5M11Q96RB7 305 aa13.05□□□□□ -0.32
DDX41-214ENST00000512334 SEBOXQ9HB31 216 aaPredicted RBP13.05□□□□□ -0.32
DDX41-214ENST00000512334 RAB26Q9ULW5 256 aa13.05□□□□□ -0.32
DDX41-214ENST00000512334 A0A0U1RQK1 487 aa13.04□□□□□ -0.32
DDX41-214ENST00000512334 hCG_1809904A0A1W2PP81 198 aa13.04□□□□□ -0.32
DDX41-214ENST00000512334 A0A1W2PPE2 198 aa13.04□□□□□ -0.32
DDX41-214ENST00000512334 A0A1W2PR64 198 aa13.04□□□□□ -0.32
DDX41-214ENST00000512334 A0A1W2PRV1 198 aa13.04□□□□□ -0.32
DDX41-214ENST00000512334 PSPNO60542 156 aa13.04□□□□□ -0.32
DDX41-214ENST00000512334 OR2H2O95918 312 aa13.04□□□□□ -0.32
DDX41-214ENST00000512334 ALDOBP05062 364 aa13.04□□□□□ -0.32
DDX41-214ENST00000512334 CD1AP06126 327 aa13.04□□□□□ -0.32
DDX41-214ENST00000512334 PRTN3P24158 256 aa13.04□□□□□ -0.32
DDX41-214ENST00000512334 OR3A4PP47883 348 aa13.04□□□□□ -0.32
DDX41-214ENST00000512334 MTNR1BP49286 362 aa13.04□□□□□ -0.32
DDX41-214ENST00000512334 BMXP51813 675 aa13.04□□□□□ -0.32
DDX41-214ENST00000512334 TPRX1Q8N7U7 411 aa13.04□□□□□ -0.32
DDX41-214ENST00000512334 PXT1Q8NFP0 134 aa13.04□□□□□ -0.32
DDX41-214ENST00000512334 OR4S1Q8NGB4 309 aa13.04□□□□□ -0.32
DDX41-214ENST00000512334 OR10K1Q8NGX5 313 aa13.04□□□□□ -0.32
DDX41-214ENST00000512334 NR1H4Q96RI1 486 aaPredicted RBP13.04□□□□□ -0.32
DDX41-214ENST00000512334 S100A13Q99584 98 aa13.04□□□□□ -0.32
DDX41-214ENST00000512334 TNFRSF19Q9NS68 423 aa13.04□□□□□ -0.32
DDX41-214ENST00000512334 FAM96BQ9Y3D0 163 aa13.04□□□□□ -0.32
DDX41-214ENST00000512334 TRAV8-7A0A075B6U6 113 aa13.03□□□□□ -0.32
DDX41-214ENST00000512334 TRBV5-7A0A0A0MS05 114 aa13.03□□□□□ -0.32
DDX41-214ENST00000512334 HOXA3O43365 443 aaPredicted RBP13.03□□□□□ -0.32
DDX41-214ENST00000512334 HTR3BO95264 441 aa13.03□□□□□ -0.32
DDX41-214ENST00000512334 IGFBP3P17936 291 aaPredicted RBP13.03□□□□□ -0.32
DDX41-214ENST00000512334 FSTP19883 344 aa13.03□□□□□ -0.32
DDX41-214ENST00000512334 CRHBPP24387 322 aa13.03□□□□□ -0.32
DDX41-214ENST00000512334 MAPK3P27361 379 aaPredicted RBP13.03□□□□□ -0.32
DDX41-214ENST00000512334 TGFBR2P37173 567 aa13.03□□□□□ -0.32
DDX41-214ENST00000512334 PTGFRP43088 359 aa13.03□□□□□ -0.32
DDX41-214ENST00000512334 ACSM1Q08AH1 577 aa13.03□□□□□ -0.32
DDX41-214ENST00000512334 SLC9A3R2Q15599 337 aa13.03□□□□□ -0.32
DDX41-214ENST00000512334 PIP4P2Q8N4L2 257 aa13.03□□□□□ -0.32
DDX41-214ENST00000512334 THRSPQ92748 146 aa13.03□□□□□ -0.32
DDX41-214ENST00000512334 GCDHQ92947 438 aaPredicted RBP13.03□□□□□ -0.32
DDX41-214ENST00000512334 TNFRSF14Q92956 283 aa13.03□□□□□ -0.32
DDX41-214ENST00000512334 SLC25A28Q96A46 364 aa13.03□□□□□ -0.32
DDX41-214ENST00000512334 C1orf147Q96MC9 270 aaPredicted RBP13.03□□□□□ -0.32
DDX41-214ENST00000512334 DERL3Q96Q80 235 aa13.03□□□□□ -0.32
DDX41-214ENST00000512334 ZNF184Q99676 751 aaPredicted RBP13.03□□□□□ -0.32
DDX41-214ENST00000512334 TMED9Q9BVK6 235 aa13.03□□□□□ -0.32
DDX41-214ENST00000512334 DUSP21Q9H596 190 aa13.03□□□□□ -0.32
DDX41-214ENST00000512334 UNKLQ9H9P5 680 aaKnown RBP13.03□□□□□ -0.32
DDX41-214ENST00000512334 ZMAT3Q9HA38 289 aaKnown RBP13.03□□□□□ -0.32
DDX41-214ENST00000512334 NOX4Q9NPH5 578 aa13.03□□□□□ -0.32
DDX41-214ENST00000512334 ING4Q9UNL4 249 aa13.03□□□□□ -0.32
DDX41-214ENST00000512334 LSM2Q9Y333 95 aaKnown RBP13.03□□□□□ -0.32
DDX41-214ENST00000512334 hADV38S2A0JD32 116 aa13.02□□□□□ -0.33
DDX41-214ENST00000512334 MEIOCA2RUB1 952 aa13.02□□□□□ -0.33
DDX41-214ENST00000512334 MAGEA13PA6NCF6 341 aa13.02□□□□□ -0.33
DDX41-214ENST00000512334 MGST3O14880 152 aa13.02□□□□□ -0.33
DDX41-214ENST00000512334 DEGS1O15121 323 aa13.02□□□□□ -0.33
DDX41-214ENST00000512334 NPFFO15130 113 aa13.02□□□□□ -0.33
DDX41-214ENST00000512334 CDRT1O95170 752 aa13.02□□□□□ -0.33
DDX41-214ENST00000512334 MAS1P04201 325 aa13.02□□□□□ -0.33
DDX41-214ENST00000512334 HSMCR30P0CW71 290 aa13.02□□□□□ -0.33
DDX41-214ENST00000512334 OR3A1P47881 315 aa13.02□□□□□ -0.33
DDX41-214ENST00000512334 UBE2E1P51965 193 aa13.02□□□□□ -0.33
DDX41-214ENST00000512334 ERVFRD-1P60508 538 aa13.02□□□□□ -0.33
DDX41-214ENST00000512334 IRF3Q14653 427 aa13.02□□□□□ -0.33
DDX41-214ENST00000512334 RBM48Q5RL73 367 aaKnown RBP13.02□□□□□ -0.33
DDX41-214ENST00000512334 Q6YL49 198 aa13.02□□□□□ -0.33
DDX41-214ENST00000512334 ZNF782Q6ZMW2 699 aaPredicted RBP13.02□□□□□ -0.33
DDX41-214ENST00000512334 PNKDQ8N490 385 aa13.02□□□□□ -0.33
DDX41-214ENST00000512334 JAGN1Q8N5M9 183 aa13.02□□□□□ -0.33
DDX41-214ENST00000512334 UFD1Q92890 307 aa13.02□□□□□ -0.33
DDX41-214ENST00000512334 METTL9Q9H1A3 318 aa13.02□□□□□ -0.33
DDX41-214ENST00000512334 PPA2Q9H2U2 334 aa13.02□□□□□ -0.33
DDX41-214ENST00000512334 ING3Q9NXR8 418 aa13.02□□□□□ -0.33
DDX41-214ENST00000512334 BLOC1S6Q9UL45 172 aa13.02□□□□□ -0.33
DDX41-214ENST00000512334 FOXJ3Q9UPW0 622 aa13.02□□□□□ -0.33
DDX41-214ENST00000512334 SF3B6Q9Y3B4 125 aaKnown RBP13.02□□□□□ -0.33
DDX41-214ENST00000512334 DNHD1Q96M86 4753 aa13.02□□□□□ -0.33
DDX41-214ENST00000512334 A0A0G2JK05 382 aa13.01□□□□□ -0.33
DDX41-214ENST00000512334 GPX5O75715 221 aa13.01□□□□□ -0.33
DDX41-214ENST00000512334 PAHP00439 452 aa13.01□□□□□ -0.33
DDX41-214ENST00000512334 CSTBP04080 98 aaKnown RBP13.01□□□□□ -0.33
DDX41-214ENST00000512334 RNASE1P07998 156 aaKnown RBP13.01□□□□□ -0.33
DDX41-214ENST00000512334 MELTFP08582 738 aa13.01□□□□□ -0.33
DDX41-214ENST00000512334 COX7A1P24310 79 aa13.01□□□□□ -0.33
DDX41-214ENST00000512334 SAA4P35542 130 aa13.01□□□□□ -0.33
DDX41-214ENST00000512334 MEF2CQ06413 473 aaPredicted RBP13.01□□□□□ -0.33
DDX41-214ENST00000512334 ELP2Q6IA86 826 aa13.01□□□□□ -0.33
DDX41-214ENST00000512334 Q6P435 159 aa13.01□□□□□ -0.33
DDX41-214ENST00000512334 PRSS48Q7RTY5 328 aa13.01□□□□□ -0.33
DDX41-214ENST00000512334 TRAPPC6BQ86SZ2 158 aa13.01□□□□□ -0.33
DDX41-214ENST00000512334 MS4A15Q8N5U1 240 aa13.01□□□□□ -0.33
DDX41-214ENST00000512334 CHST4Q8NCG5 386 aa13.01□□□□□ -0.33
DDX41-214ENST00000512334 ZNF714Q96N38 554 aa13.01□□□□□ -0.33
DDX41-214ENST00000512334 PRDM13Q9H4Q3 707 aa13.01□□□□□ -0.33
DDX41-214ENST00000512334 Q9H521 79 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms