RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 VN1R1Q9GZP7 353 aa9.65□□□□□ -0.86
CPNE4-209ENST00000512055 ZSWIM8A7E2V4 1837 aa9.65□□□□□ -0.86
CPNE4-209ENST00000512055 IGHV4-34P06331 123 aa9.65□□□□□ -0.86
CPNE4-209ENST00000512055 KIR2DL3P43628 341 aa9.65□□□□□ -0.86
CPNE4-209ENST00000512055 FHITP49789 147 aa9.65□□□□□ -0.86
CPNE4-209ENST00000512055 CCL7P80098 99 aa9.65□□□□□ -0.86
CPNE4-209ENST00000512055 MFAP5Q13361 173 aa9.65□□□□□ -0.86
CPNE4-209ENST00000512055 ZNF506Q5JVG8 444 aa9.65□□□□□ -0.86
CPNE4-209ENST00000512055 SYS1Q8N2H4 156 aa9.65□□□□□ -0.86
CPNE4-209ENST00000512055 DEFB123Q8N688 67 aa9.65□□□□□ -0.86
CPNE4-209ENST00000512055 DUSP18Q8NEJ0 188 aa9.65□□□□□ -0.86
CPNE4-209ENST00000512055 PCOLCE2Q9UKZ9 415 aa9.65□□□□□ -0.86
CPNE4-209ENST00000512055 DUS4LO95620 317 aaKnown RBP9.65□□□□□ -0.86
CPNE4-209ENST00000512055 EFEMP2O95967 443 aa9.65□□□□□ -0.86
CPNE4-209ENST00000512055 IL5P05113 134 aa9.65□□□□□ -0.86
CPNE4-209ENST00000512055 GUSBP11Q6P575 273 aa9.65□□□□□ -0.86
CPNE4-209ENST00000512055 RPS19BP1Q86WX3 136 aaKnown RBP9.65□□□□□ -0.86
CPNE4-209ENST00000512055 SLC38A9Q8NBW4 561 aa9.65□□□□□ -0.86
CPNE4-209ENST00000512055 DERL1Q9BUN8 251 aa9.65□□□□□ -0.86
CPNE4-209ENST00000512055 COL25A1Q9BXS0 654 aaPredicted RBP9.65□□□□□ -0.86
CPNE4-209ENST00000512055 CHRNA10Q9GZZ6 450 aa9.65□□□□□ -0.86
CPNE4-209ENST00000512055 TMEM238LA0A1B0GVL6 79 aa9.65□□□□□ -0.87
CPNE4-209ENST00000512055 C7orf77A4D0Y5 90 aa9.65□□□□□ -0.87
CPNE4-209ENST00000512055 A6NJY4 79 aa9.65□□□□□ -0.87
CPNE4-209ENST00000512055 ZNF324O75467 553 aaPredicted RBP9.65□□□□□ -0.87
CPNE4-209ENST00000512055 GPANK1O95872 356 aa9.65□□□□□ -0.87
CPNE4-209ENST00000512055 PNLIPRP2P54317 469 aa9.65□□□□□ -0.87
CPNE4-209ENST00000512055 CD300CQ08708 224 aa9.65□□□□□ -0.87
CPNE4-209ENST00000512055 BSXQ3C1V8 233 aa9.65□□□□□ -0.87
CPNE4-209ENST00000512055 LYG2Q86SG7 212 aa9.65□□□□□ -0.87
CPNE4-209ENST00000512055 CALHM1Q8IU99 346 aa9.65□□□□□ -0.87
CPNE4-209ENST00000512055 FSCN3Q9NQT6 498 aa9.65□□□□□ -0.87
CPNE4-209ENST00000512055 CLEC18AA5D8T8 446 aa9.65□□□□□ -0.87
CPNE4-209ENST00000512055 APOBEC1P41238 236 aaKnown RBP9.65□□□□□ -0.87
CPNE4-209ENST00000512055 C19orf57Q0VDD7 668 aa9.65□□□□□ -0.87
CPNE4-209ENST00000512055 VHLLQ6RSH7 139 aa9.65□□□□□ -0.87
CPNE4-209ENST00000512055 LINC00696Q6ZRV3 163 aa9.65□□□□□ -0.87
CPNE4-209ENST00000512055 SCCPDHQ8NBX0 429 aa9.65□□□□□ -0.87
CPNE4-209ENST00000512055 CLEC18CQ8NCF0 446 aa9.65□□□□□ -0.87
CPNE4-209ENST00000512055 FAM117AQ9C073 453 aa9.65□□□□□ -0.87
CPNE4-209ENST00000512055 FLRT3Q9NZU0 649 aa9.65□□□□□ -0.87
CPNE4-209ENST00000512055 NAGKQ9UJ70 344 aa9.65□□□□□ -0.87
CPNE4-209ENST00000512055 DOCK4Q8N1I0 1966 aa9.65□□□□□ -0.87
CPNE4-209ENST00000512055 PRSS37A4D1T9 235 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 SLC17A3O00476 420 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 KLF7O75840 302 aaPredicted RBP9.64□□□□□ -0.87
CPNE4-209ENST00000512055 THBS4P35443 961 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 ZNF117Q03924 483 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 UBE2V2Q15819 145 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 AMMECR1LQ6DCA0 310 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 NAXDQ8IW45 347 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 NKAIN3Q8N8D7 197 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 OR2I1PQ8NGU4 316 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 AUNIPQ9H7T9 357 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 DYNLRB1Q9NP97 96 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 KCNK7Q9Y2U2 307 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 UTRNP46939 3433 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 TNFSF14O43557 240 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 GALR2O43603 387 aaPredicted RBP9.64□□□□□ -0.87
CPNE4-209ENST00000512055 CST4P01036 141 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 BCL3P20749 454 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 DCTDP32321 178 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 CKS1BP61024 79 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 SLC22A18ASQ8N1D0 253 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 C17orf47Q8NEP4 570 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 CADM4Q8NFZ8 388 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 OR1N1Q8NGS0 311 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 ZNF502Q8TBZ5 544 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 H1FXQ92522 213 aaKnown RBP9.64□□□□□ -0.87
CPNE4-209ENST00000512055 KCNK15Q9H427 330 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 MMP25Q9NPA2 562 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 MTCH2Q9Y6C9 303 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 VWA8A3KMH1 1905 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 KIR2DS1A0A191URI9 304 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 IL9P15248 144 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 KIR2DS4P43632 304 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 KIR2DS1Q14954 304 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 SAPCD1Q5SSQ6 148 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 TRAT1Q6PIZ9 186 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 TAS2R4Q9NYW5 299 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 TRAV39A0A0B4J263 110 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 HS3ST1O14792 307 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 LDLRAD4O15165 306 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 ARTNQ5T4W7 220 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 MRPL54Q6P161 138 aaKnown RBP9.64□□□□□ -0.87
CPNE4-209ENST00000512055 AAED1Q7RTV5 226 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 NUDCD2Q8WVJ2 157 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 BARHL1Q9BZE3 327 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 SLCO1C1Q9NYB5 712 aa9.64□□□□□ -0.87
CPNE4-209ENST00000512055 SEMG1P04279 462 aa9.63□□□□□ -0.87
CPNE4-209ENST00000512055 NXPH1P58417 271 aa9.63□□□□□ -0.87
CPNE4-209ENST00000512055 PCBD1P61457 104 aa9.63□□□□□ -0.87
CPNE4-209ENST00000512055 RPS16P62249 146 aaKnown RBP9.63□□□□□ -0.87
CPNE4-209ENST00000512055 RBPJQ06330 500 aa9.63□□□□□ -0.87
CPNE4-209ENST00000512055 IL24Q13007 206 aa9.63□□□□□ -0.87
CPNE4-209ENST00000512055 PLXDC2Q6UX71 529 aa9.63□□□□□ -0.87
CPNE4-209ENST00000512055 EMG1Q92979 244 aaKnown RBP9.63□□□□□ -0.87
CPNE4-209ENST00000512055 PELI1Q96FA3 418 aa9.63□□□□□ -0.87
CPNE4-209ENST00000512055 MIEN1Q9BRT3 115 aa9.63□□□□□ -0.87
CPNE4-209ENST00000512055 C1QTNF6Q9BXI9 259 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms