RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 ST3GAL2Q16842 350 aa12.87□□□□□ -0.35
SCLT1-209ENST00000511426 METTL11BQ5VVY1 283 aa12.87□□□□□ -0.35
SCLT1-209ENST00000511426 FAAP20Q6NZ36 180 aa12.87□□□□□ -0.35
SCLT1-209ENST00000511426 IDO2Q6ZQW0 420 aa12.87□□□□□ -0.35
SCLT1-209ENST00000511426 GLCCI1Q86VQ1 547 aa12.87□□□□□ -0.35
SCLT1-209ENST00000511426 OR4S1Q8NGB4 309 aa12.87□□□□□ -0.35
SCLT1-209ENST00000511426 CCDC107Q8WV48 283 aa12.87□□□□□ -0.35
SCLT1-209ENST00000511426 TINAGL1Q9GZM7 467 aaPredicted RBP12.87□□□□□ -0.35
SCLT1-209ENST00000511426 ZNF286AQ9HBT8 521 aa12.87□□□□□ -0.35
SCLT1-209ENST00000511426 GPN1Q9HCN4 374 aaPredicted RBP12.87□□□□□ -0.35
SCLT1-209ENST00000511426 ZNF701Q9NV72 531 aaPredicted RBP12.87□□□□□ -0.35
SCLT1-209ENST00000511426 RNF115Q9Y4L5 304 aa12.87□□□□□ -0.35
SCLT1-209ENST00000511426 NPTNQ9Y639 398 aa12.87□□□□□ -0.35
SCLT1-209ENST00000511426 TRAV6A0A075B6T7 132 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 A0A0B4J293 547 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 CEACAM18A8MTB9 384 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 SRRM5B3KS81 715 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 SHISA9B4DS77 424 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 DEGS1O15121 323 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 NAPSAO96009 420 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 LMO1P25800 156 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 APOBEC3AP31941 199 aaPredicted RBP12.86□□□□□ -0.35
SCLT1-209ENST00000511426 RAB25P57735 213 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 TLE1Q04724 770 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 CDK10Q15131 360 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 TESK1Q15569 626 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 MICBQ29980 383 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 CHRFAM7AQ494W8 412 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 OR52W1Q6IF63 320 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 OVCH2Q7RTZ1 564 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 AKAP14Q86UN6 197 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 Q8TCH9 128 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 OR2V2Q96R30 315 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 ST6GALNAC5Q9BVH7 336 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 ANXA10Q9UJ72 324 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 ALG5Q9Y673 324 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 KIR2DS1A0A191URI9 304 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 SNRPGP15A8MWD9 76 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 M0QYG6 137 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 M0R233 179 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 TNFRSF1AP19438 455 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 GLRA1P23415 457 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 SERPINF1P36955 418 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 KIR2DS4P43632 304 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 KIR2DS1Q14954 304 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 SURF2Q15527 256 aaPredicted RBP12.86□□□□□ -0.35
SCLT1-209ENST00000511426 ADAM5Q6NVV9 412 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 Q6P435 159 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 ACP7Q6ZNF0 438 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 MOB1BQ7L9L4 216 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 RTN4RL2Q86UN3 420 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 SUMF2Q8NBJ7 301 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 GIMAP1Q8WWP7 306 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 ZNF488Q96MN9 340 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 SLC6A7Q99884 636 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 DPCDQ9BVM2 203 aaPredicted RBP12.86□□□□□ -0.35
SCLT1-209ENST00000511426 PPA2Q9H2U2 334 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 MS4A5Q9H3V2 200 aa12.86□□□□□ -0.35
SCLT1-209ENST00000511426 C17orf100A8MU93 164 aa12.85□□□□□ -0.35
SCLT1-209ENST00000511426 B9A039 149 aa12.85□□□□□ -0.35
SCLT1-209ENST00000511426 IGHV1-46P01743 117 aa12.85□□□□□ -0.35
SCLT1-209ENST00000511426 ZNF44P15621 663 aa12.85□□□□□ -0.35
SCLT1-209ENST00000511426 GNLYP22749 145 aa12.85□□□□□ -0.35
SCLT1-209ENST00000511426 ARPC4P59998 168 aa12.85□□□□□ -0.35
SCLT1-209ENST00000511426 TNFAIP6P98066 277 aaPredicted RBP12.85□□□□□ -0.35
SCLT1-209ENST00000511426 PAX5Q02548 391 aa12.85□□□□□ -0.35
SCLT1-209ENST00000511426 PRAMEF6Q5VXH4 476 aa12.85□□□□□ -0.35
SCLT1-209ENST00000511426 FAHD2BQ6P2I3 314 aaPredicted RBP12.85□□□□□ -0.35
SCLT1-209ENST00000511426 DMRTC2Q8IXT2 367 aaPredicted RBP12.85□□□□□ -0.35
SCLT1-209ENST00000511426 TERB2Q8NHR7 220 aa12.85□□□□□ -0.35
SCLT1-209ENST00000511426 HPS1Q92902 700 aa12.85□□□□□ -0.35
SCLT1-209ENST00000511426 FAHD2AQ96GK7 314 aa12.85□□□□□ -0.35
SCLT1-209ENST00000511426 DHRS9Q9BPW9 319 aa12.85□□□□□ -0.35
SCLT1-209ENST00000511426 TMEM204Q9BSN7 226 aa12.85□□□□□ -0.35
SCLT1-209ENST00000511426 GHITMQ9H3K2 345 aa12.85□□□□□ -0.35
SCLT1-209ENST00000511426 NECAP2Q9NVZ3 263 aa12.85□□□□□ -0.35
SCLT1-209ENST00000511426 C1orf123Q9NWV4 160 aa12.85□□□□□ -0.35
SCLT1-209ENST00000511426 TRAV24A0A0B4J272 114 aa12.84□□□□□ -0.35
SCLT1-209ENST00000511426 hCG_1807616A0A1W2PRN6 198 aa12.84□□□□□ -0.35
SCLT1-209ENST00000511426 ARPC1BO15143 372 aaKnown RBP12.84□□□□□ -0.35
SCLT1-209ENST00000511426 SPRY3O43610 288 aa12.84□□□□□ -0.35
SCLT1-209ENST00000511426 DIRAS3O95661 229 aa12.84□□□□□ -0.35
SCLT1-209ENST00000511426 HAND1O96004 215 aa12.84□□□□□ -0.35
SCLT1-209ENST00000511426 CTXN2P0C2S0 81 aa12.84□□□□□ -0.35
SCLT1-209ENST00000511426 UBE2MP61081 183 aaKnown RBP12.84□□□□□ -0.35
SCLT1-209ENST00000511426 RRAS2P62070 204 aaPredicted RBP12.84□□□□□ -0.35
SCLT1-209ENST00000511426 MPPED2Q15777 294 aa12.84□□□□□ -0.35
SCLT1-209ENST00000511426 GLDNQ6ZMI3 551 aaPredicted RBP12.84□□□□□ -0.35
SCLT1-209ENST00000511426 LHFPL1Q86WI0 220 aa12.84□□□□□ -0.35
SCLT1-209ENST00000511426 GAPTQ8N292 157 aa12.84□□□□□ -0.35
SCLT1-209ENST00000511426 OR11L1Q8NGX0 322 aa12.84□□□□□ -0.35
SCLT1-209ENST00000511426 NEK7Q8TDX7 302 aa12.84□□□□□ -0.35
SCLT1-209ENST00000511426 ITLN2Q8WWU7 325 aaPredicted RBP12.84□□□□□ -0.35
SCLT1-209ENST00000511426 HS3ST6Q96QI5 342 aa12.84□□□□□ -0.35
SCLT1-209ENST00000511426 EGLN1Q9GZT9 426 aa12.84□□□□□ -0.35
SCLT1-209ENST00000511426 ETAA1Q9NY74 926 aa12.84□□□□□ -0.35
SCLT1-209ENST00000511426 IL36RNQ9UBH0 155 aa12.84□□□□□ -0.35
SCLT1-209ENST00000511426 RP1L1Q8IWN7 2480 aaPredicted RBP12.83□□□□□ -0.35
SCLT1-209ENST00000511426 TMEM82A0PJX8 343 aa12.83□□□□□ -0.35
SCLT1-209ENST00000511426 UBE2QL1A1L167 161 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms