RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 DCTN5Q9BTE1 182 aa10.65□□□□□ -0.7
COL6A6-203ENST00000511332 BEX2Q9BXY8 128 aa10.65□□□□□ -0.7
COL6A6-203ENST00000511332 TMPRSS13Q9BYE2 586 aa10.65□□□□□ -0.7
COL6A6-203ENST00000511332 METRNQ9UJH8 293 aa10.65□□□□□ -0.7
COL6A6-203ENST00000511332 SSR3Q9UNL2 185 aa10.65□□□□□ -0.7
COL6A6-203ENST00000511332 AUP1Q9Y679 476 aa10.65□□□□□ -0.7
COL6A6-203ENST00000511332 MTORP42345 2549 aa10.65□□□□□ -0.7
COL6A6-203ENST00000511332 SONP18583 2426 aaKnown RBP10.65□□□□□ -0.71
COL6A6-203ENST00000511332 A0A1W2PPH5 198 aa10.64□□□□□ -0.71
COL6A6-203ENST00000511332 K7N7A8 449 aa10.64□□□□□ -0.71
COL6A6-203ENST00000511332 ZNF737O75373 536 aa10.64□□□□□ -0.71
COL6A6-203ENST00000511332 OR2H2O95918 312 aa10.64□□□□□ -0.71
COL6A6-203ENST00000511332 PPIAL4GP0DN37 164 aa10.64□□□□□ -0.71
COL6A6-203ENST00000511332 CALCBP10092 127 aa10.64□□□□□ -0.71
COL6A6-203ENST00000511332 GTF2F2P13984 249 aa10.64□□□□□ -0.71
COL6A6-203ENST00000511332 ZNF44P15621 663 aa10.64□□□□□ -0.71
COL6A6-203ENST00000511332 CD36P16671 472 aa10.64□□□□□ -0.71
COL6A6-203ENST00000511332 GABRR1P24046 479 aa10.64□□□□□ -0.71
COL6A6-203ENST00000511332 DUSP1P28562 367 aa10.64□□□□□ -0.71
COL6A6-203ENST00000511332 RBM11P57052 281 aaKnown RBP10.64□□□□□ -0.71
COL6A6-203ENST00000511332 PAX8Q06710 450 aa10.64□□□□□ -0.71
COL6A6-203ENST00000511332 TIMM50Q3ZCQ8 353 aa10.64□□□□□ -0.71
COL6A6-203ENST00000511332 C22orf42Q6IC83 251 aa10.64□□□□□ -0.71
COL6A6-203ENST00000511332 GDPD3Q7L5L3 318 aa10.64□□□□□ -0.71
COL6A6-203ENST00000511332 LYPD6Q86Y78 171 aa10.64□□□□□ -0.71
COL6A6-203ENST00000511332 CMTM4Q8IZR5 234 aa10.64□□□□□ -0.71
COL6A6-203ENST00000511332 FGFRL1Q8N441 504 aa10.64□□□□□ -0.71
COL6A6-203ENST00000511332 KIR3DL3Q8N743 410 aa10.64□□□□□ -0.71
COL6A6-203ENST00000511332 OR4D6Q8NGJ1 314 aa10.64□□□□□ -0.71
COL6A6-203ENST00000511332 MRPS24Q96EL2 167 aaKnown RBP10.64□□□□□ -0.71
COL6A6-203ENST00000511332 CST11Q9H112 138 aa10.64□□□□□ -0.71
COL6A6-203ENST00000511332 PLGRKTQ9HBL7 147 aa10.64□□□□□ -0.71
COL6A6-203ENST00000511332 FN1P02751 2386 aaKnown RBP10.63□□□□□ -0.71
COL6A6-203ENST00000511332 A0A1W2PQ09 198 aa10.63□□□□□ -0.71
COL6A6-203ENST00000511332 SIRPB1O00241 398 aa10.63□□□□□ -0.71
COL6A6-203ENST00000511332 SLC17A2O00624 439 aa10.63□□□□□ -0.71
COL6A6-203ENST00000511332 JUNBP17275 347 aaPredicted RBP10.63□□□□□ -0.71
COL6A6-203ENST00000511332 SRD5A1P18405 259 aa10.63□□□□□ -0.71
COL6A6-203ENST00000511332 HTR2CP28335 458 aa10.63□□□□□ -0.71
COL6A6-203ENST00000511332 SRP14P37108 136 aaKnown RBP10.63□□□□□ -0.71
COL6A6-203ENST00000511332 GRK1Q15835 563 aa10.63□□□□□ -0.71
COL6A6-203ENST00000511332 MPV17LQ2QL34 196 aa10.63□□□□□ -0.71
COL6A6-203ENST00000511332 PIGYQ3MUY2 71 aa10.63□□□□□ -0.71
COL6A6-203ENST00000511332 C1orf100Q5SVJ3 147 aa10.63□□□□□ -0.71
COL6A6-203ENST00000511332 METTL11BQ5VVY1 283 aa10.63□□□□□ -0.71
COL6A6-203ENST00000511332 IL17RELQ6ZVW7 336 aa10.63□□□□□ -0.71
COL6A6-203ENST00000511332 LY6G5BQ8NDX9 201 aa10.63□□□□□ -0.71
COL6A6-203ENST00000511332 MRPS26Q9BYN8 205 aaKnown RBP10.63□□□□□ -0.71
COL6A6-203ENST00000511332 TXNL4BQ9NX01 149 aaKnown RBP10.63□□□□□ -0.71
COL6A6-203ENST00000511332 ONECUT1Q9UBC0 465 aa10.63□□□□□ -0.71
COL6A6-203ENST00000511332 ST3GAL6Q9Y274 331 aa10.63□□□□□ -0.71
COL6A6-203ENST00000511332 KPTNQ9Y664 436 aa10.63□□□□□ -0.71
COL6A6-203ENST00000511332 FUOMA2VDF0 154 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 MGST3O14880 152 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 DEGS1O15121 323 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 SLC22A1O15245 554 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 PSPNO60542 156 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 CRTAPO75718 401 aaPredicted RBP10.62□□□□□ -0.71
COL6A6-203ENST00000511332 BPNT1O95861 308 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 CSN2P05814 226 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 SMIM18P0DKX4 95 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 CD37P11049 281 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 MGMTP16455 207 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 RAB3BP20337 219 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 GADD45AP24522 165 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 LMO1P25800 156 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 OR3A1P47881 315 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 EDDM3BP56851 147 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 RPL31P62899 125 aaKnown RBP10.62□□□□□ -0.71
COL6A6-203ENST00000511332 SCN1BQ07699 218 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 RAB11BQ15907 218 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 C17orf107Q6ZR85 190 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 FAM185AQ8N0U4 392 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 NANPQ8TBE9 248 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 C1orf147Q96MC9 270 aaPredicted RBP10.62□□□□□ -0.71
COL6A6-203ENST00000511332 KCTD7Q96MP8 289 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 CHCHD6Q9BRQ6 235 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 CHST6Q9GZX3 395 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 IFT22Q9H7X7 185 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 OPN4Q9UHM6 478 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 AK6Q9Y3D8 172 aaKnown RBP10.62□□□□□ -0.71
COL6A6-203ENST00000511332 V9GY05 133 aa10.62□□□□□ -0.71
COL6A6-203ENST00000511332 LOC100506127A0A0U1RQW1 187 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 TMEM82A0PJX8 343 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 FAM90A10PA6NDY2 464 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 FAM90A18PA6NE21 464 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 FAM90A16PA6NEW6 464 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 FAM90A20PA6NIJ5 464 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 FAM90A8PA6NJQ4 464 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 FAM90A7PA6NKC0 464 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 FAM90A22PA8MWA6 464 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 FAM90A12PA8MX19 464 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 FAM90A5PA8MXJ8 464 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 FAM90A23PA8MXZ1 464 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 H3BUI4 141 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 M0R1W7 72 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 SLC33A1O00400 549 aaPredicted RBP10.61□□□□□ -0.71
COL6A6-203ENST00000511332 OR7C1O76099 320 aaPredicted RBP10.61□□□□□ -0.71
COL6A6-203ENST00000511332 TOX4O94842 621 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 FAM90A15PP0C7V4 464 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms