RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 SERPINA12Q8IW75 414 aa14.5□□□□□ -0.09
TPM3-220ENST00000509601 SAXO1Q8IYX7 474 aa14.5□□□□□ -0.09
TPM3-220ENST00000509601 PARP16Q8N5Y8 322 aa14.5□□□□□ -0.09
TPM3-220ENST00000509601 OR5D18Q8NGL1 313 aa14.5□□□□□ -0.09
TPM3-220ENST00000509601 OR5AK2Q8NH90 309 aa14.5□□□□□ -0.09
TPM3-220ENST00000509601 JAM3Q9BX67 310 aa14.5□□□□□ -0.09
TPM3-220ENST00000509601 TCF7L1Q9HCS4 588 aa14.5□□□□□ -0.09
TPM3-220ENST00000509601 TBL2Q9Y4P3 447 aaKnown RBP14.5□□□□□ -0.09
TPM3-220ENST00000509601 LINC00312Q9Y6C7 94 aa14.5□□□□□ -0.09
TPM3-220ENST00000509601 TMEM212A6NML5 194 aa14.49□□□□□ -0.09
TPM3-220ENST00000509601 SIRPB1O00241 398 aa14.49□□□□□ -0.09
TPM3-220ENST00000509601 SH2D1BO14796 132 aa14.49□□□□□ -0.09
TPM3-220ENST00000509601 CHST1O43916 411 aa14.49□□□□□ -0.09
TPM3-220ENST00000509601 OR2H2O95918 312 aa14.49□□□□□ -0.09
TPM3-220ENST00000509601 GBX2P52951 348 aaPredicted RBP14.49□□□□□ -0.09
TPM3-220ENST00000509601 ZP1P60852 638 aa14.49□□□□□ -0.09
TPM3-220ENST00000509601 OR5D14Q8NGL3 314 aa14.49□□□□□ -0.09
TPM3-220ENST00000509601 COMMD4Q9H0A8 199 aa14.49□□□□□ -0.09
TPM3-220ENST00000509601 SMPD3Q9NY59 655 aaPredicted RBP14.49□□□□□ -0.09
TPM3-220ENST00000509601 GLS2Q9UI32 602 aa14.49□□□□□ -0.09
TPM3-220ENST00000509601 NOTCH1P46531 2555 aa14.48□□□□□ -0.09
TPM3-220ENST00000509601 A0A0G2JK05 382 aa14.48□□□□□ -0.09
TPM3-220ENST00000509601 M0QZ24 198 aa14.48□□□□□ -0.09
TPM3-220ENST00000509601 CLIC3O95833 236 aa14.48□□□□□ -0.09
TPM3-220ENST00000509601 RPSAP08865 295 aaKnown RBP14.48□□□□□ -0.09
TPM3-220ENST00000509601 CCDC159P0C7I6 412 aa14.48□□□□□ -0.09
TPM3-220ENST00000509601 OCM2P0CE71 109 aa14.48□□□□□ -0.09
TPM3-220ENST00000509601 OCMP0CE72 109 aaPredicted RBP14.48□□□□□ -0.09
TPM3-220ENST00000509601 GABRA5P31644 462 aa14.48□□□□□ -0.09
TPM3-220ENST00000509601 EFNB2P52799 333 aa14.48□□□□□ -0.09
TPM3-220ENST00000509601 P2RX3P56373 397 aa14.48□□□□□ -0.09
TPM3-220ENST00000509601 IL18R1Q13478 541 aa14.48□□□□□ -0.09
TPM3-220ENST00000509601 KISS1Q15726 138 aa14.48□□□□□ -0.09
TPM3-220ENST00000509601 SSX2Q16385 188 aa14.48□□□□□ -0.09
TPM3-220ENST00000509601 XAF1Q6GPH4 301 aa14.48□□□□□ -0.09
TPM3-220ENST00000509601 ZNF529Q6P280 563 aa14.48□□□□□ -0.09
TPM3-220ENST00000509601 RGP1Q92546 391 aaPredicted RBP14.48□□□□□ -0.09
TPM3-220ENST00000509601 CORO2AQ92828 525 aa14.48□□□□□ -0.09
TPM3-220ENST00000509601 RDH12Q96NR8 316 aa14.48□□□□□ -0.09
TPM3-220ENST00000509601 RHOFQ9HBH0 211 aa14.48□□□□□ -0.09
TPM3-220ENST00000509601 EXOSC4Q9NPD3 245 aaKnown RBP14.48□□□□□ -0.09
TPM3-220ENST00000509601 SESN1Q9Y6P5 492 aa14.48□□□□□ -0.09
TPM3-220ENST00000509601 A6NDX4 124 aa14.47□□□□□ -0.09
TPM3-220ENST00000509601 SULT1B1O43704 296 aa14.47□□□□□ -0.09
TPM3-220ENST00000509601 JUNBP17275 347 aaPredicted RBP14.47□□□□□ -0.09
TPM3-220ENST00000509601 ETV1P50549 477 aa14.47□□□□□ -0.09
TPM3-220ENST00000509601 AESQ08117 197 aa14.47□□□□□ -0.09
TPM3-220ENST00000509601 CDK5R1Q15078 307 aa14.47□□□□□ -0.09
TPM3-220ENST00000509601 FAM189A2Q15884 450 aa14.47□□□□□ -0.09
TPM3-220ENST00000509601 PLA1AQ53H76 456 aa14.47□□□□□ -0.09
TPM3-220ENST00000509601 BAIAP2L2Q6UXY1 529 aa14.47□□□□□ -0.09
TPM3-220ENST00000509601 ZNF555Q8NEP9 628 aa14.47□□□□□ -0.09
TPM3-220ENST00000509601 RPS4Y2Q8TD47 263 aa14.47□□□□□ -0.09
TPM3-220ENST00000509601 TMEM133Q9H2Q1 129 aa14.47□□□□□ -0.09
TPM3-220ENST00000509601 DHDHQ9UQ10 334 aa14.47□□□□□ -0.09
TPM3-220ENST00000509601 UBE2J1Q9Y385 318 aaPredicted RBP14.47□□□□□ -0.09
TPM3-220ENST00000509601 SIRT4Q9Y6E7 314 aaPredicted RBP14.47□□□□□ -0.09
TPM3-220ENST00000509601 PRKDCP78527 4128 aaKnown RBP14.47□□□□□ -0.09
TPM3-220ENST00000509601 IGHV2-26A0A0B4J1V2 119 aa14.46□□□□□ -0.09
TPM3-220ENST00000509601 SLC33A1O00400 549 aaPredicted RBP14.46□□□□□ -0.09
TPM3-220ENST00000509601 TMEM225BP0DP42 221 aa14.46□□□□□ -0.09
TPM3-220ENST00000509601 DCKP27707 260 aa14.46□□□□□ -0.09
TPM3-220ENST00000509601 GLIPR1P48060 266 aa14.46□□□□□ -0.09
TPM3-220ENST00000509601 SCN1BQ07699 218 aa14.46□□□□□ -0.09
TPM3-220ENST00000509601 DYNC1I2Q13409 638 aaKnown RBP14.46□□□□□ -0.09
TPM3-220ENST00000509601 ZSCAN26Q16670 478 aa14.46□□□□□ -0.09
TPM3-220ENST00000509601 OR2G6Q5TZ20 316 aa14.46□□□□□ -0.09
TPM3-220ENST00000509601 ZNF691Q5VV52 312 aa14.46□□□□□ -0.09
TPM3-220ENST00000509601 RPL22L1Q6P5R6 122 aaKnown RBP14.46□□□□□ -0.09
TPM3-220ENST00000509601 LIAT1Q6ZQX7 453 aa14.46□□□□□ -0.09
TPM3-220ENST00000509601 OR51A2Q8NGJ7 313 aa14.46□□□□□ -0.09
TPM3-220ENST00000509601 CNIH3Q8TBE1 160 aa14.46□□□□□ -0.09
TPM3-220ENST00000509601 HAVCR2Q8TDQ0 301 aa14.46□□□□□ -0.09
TPM3-220ENST00000509601 CDCA4Q9BXL8 241 aa14.46□□□□□ -0.09
TPM3-220ENST00000509601 MMP27Q9H306 513 aa14.46□□□□□ -0.09
TPM3-220ENST00000509601 RANBP3Q9H6Z4 567 aaPredicted RBP14.46□□□□□ -0.09
TPM3-220ENST00000509601 NEK6Q9HC98 313 aa14.46□□□□□ -0.09
TPM3-220ENST00000509601 RAB18Q9NP72 206 aa14.46□□□□□ -0.09
TPM3-220ENST00000509601 TCF19Q9Y242 345 aa14.46□□□□□ -0.09
TPM3-220ENST00000509601 HCKP08631 526 aa14.45□□□□□ -0.1
TPM3-220ENST00000509601 GDNFP39905 211 aa14.45□□□□□ -0.1
TPM3-220ENST00000509601 DYNLT3P51808 116 aa14.45□□□□□ -0.1
TPM3-220ENST00000509601 ADARB1P78563 741 aaKnown RBP14.45□□□□□ -0.1
TPM3-220ENST00000509601 CCDC58Q4VC31 144 aa14.45□□□□□ -0.1
TPM3-220ENST00000509601 MINOS1Q5TGZ0 78 aa14.45□□□□□ -0.1
TPM3-220ENST00000509601 HIST2H2BDQ6DRA6 164 aa14.45□□□□□ -0.1
TPM3-220ENST00000509601 ELP2Q6IA86 826 aa14.45□□□□□ -0.1
TPM3-220ENST00000509601 Q8NFD4 153 aa14.45□□□□□ -0.1
TPM3-220ENST00000509601 PXT1Q8NFP0 134 aa14.45□□□□□ -0.1
TPM3-220ENST00000509601 OR4C13Q8NGP0 309 aa14.45□□□□□ -0.1
TPM3-220ENST00000509601 FOXRED1Q96CU9 486 aaPredicted RBP14.45□□□□□ -0.1
TPM3-220ENST00000509601 COQ2Q96H96 371 aa14.45□□□□□ -0.1
TPM3-220ENST00000509601 CLEC2DQ9UHP7 191 aa14.45□□□□□ -0.1
TPM3-220ENST00000509601 FOXJ3Q9UPW0 622 aa14.45□□□□□ -0.1
TPM3-220ENST00000509601 MINOS1-NBL1R4GNA1 71 aa14.45□□□□□ -0.1
TPM3-220ENST00000509601 DEGS1O15121 323 aa14.44□□□□□ -0.1
TPM3-220ENST00000509601 OGG1O15527 345 aa14.44□□□□□ -0.1
TPM3-220ENST00000509601 LALBAP00709 142 aa14.44□□□□□ -0.1
TPM3-220ENST00000509601 CSN2P05814 226 aa14.44□□□□□ -0.1
TPM3-220ENST00000509601 ZNF44P15621 663 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms