RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 FAM90A13PP0C7W8 464 aa15.47■□□□□ 0.07
CCHCR1-228ENST00000509552 FAM90A14PP0C7W9 464 aa15.47■□□□□ 0.07
CCHCR1-228ENST00000509552 FAM90A24PP0C7X0 464 aa15.47■□□□□ 0.07
CCHCR1-228ENST00000509552 JMJD7P0C870 316 aa15.47■□□□□ 0.07
CCHCR1-228ENST00000509552 PVALBP20472 110 aaPredicted RBP15.47■□□□□ 0.07
CCHCR1-228ENST00000509552 AADACP22760 399 aa15.47■□□□□ 0.07
CCHCR1-228ENST00000509552 GPR157Q5UAW9 335 aa15.47■□□□□ 0.07
CCHCR1-228ENST00000509552 FBXW12Q6X9E4 464 aa15.47■□□□□ 0.07
CCHCR1-228ENST00000509552 Q6ZRG5 221 aa15.47■□□□□ 0.07
CCHCR1-228ENST00000509552 MSI2Q96DH6 328 aaKnown RBP15.47■□□□□ 0.07
CCHCR1-228ENST00000509552 ARID1AO14497 2285 aa15.47■□□□□ 0.07
CCHCR1-228ENST00000509552 SYNGR4O95473 234 aa15.46■□□□□ 0.07
CCHCR1-228ENST00000509552 GLI4P10075 376 aa15.46■□□□□ 0.07
CCHCR1-228ENST00000509552 IL32P24001 234 aa15.46■□□□□ 0.07
CCHCR1-228ENST00000509552 NPBWR2P48146 333 aa15.46■□□□□ 0.07
CCHCR1-228ENST00000509552 IL13RA2Q14627 380 aa15.46■□□□□ 0.07
CCHCR1-228ENST00000509552 LPAL2Q16609 132 aa15.46■□□□□ 0.07
CCHCR1-228ENST00000509552 FAM76BQ5HYJ3 339 aa15.46■□□□□ 0.07
CCHCR1-228ENST00000509552 CBLN2Q8IUK8 224 aa15.46■□□□□ 0.07
CCHCR1-228ENST00000509552 OR2M7Q8NG81 312 aa15.46■□□□□ 0.07
CCHCR1-228ENST00000509552 OR56B2PQ8NGI1 322 aa15.46■□□□□ 0.07
CCHCR1-228ENST00000509552 OR11L1Q8NGX0 322 aa15.46■□□□□ 0.07
CCHCR1-228ENST00000509552 ERGIC1Q969X5 290 aa15.46■□□□□ 0.07
CCHCR1-228ENST00000509552 TMED3Q9Y3Q3 217 aa15.46■□□□□ 0.07
CCHCR1-228ENST00000509552 RPL36A-HNRNPH2H7BZ11 118 aa15.46■□□□□ 0.07
CCHCR1-228ENST00000509552 ST8SIA3O43173 380 aa15.46■□□□□ 0.07
CCHCR1-228ENST00000509552 F12P00748 615 aaPredicted RBP15.46■□□□□ 0.07
CCHCR1-228ENST00000509552 PPYP01298 95 aa15.46■□□□□ 0.07
CCHCR1-228ENST00000509552 ABHD17BQ5VST6 288 aa15.46■□□□□ 0.07
CCHCR1-228ENST00000509552 C9orf135Q5VTT2 229 aa15.46■□□□□ 0.07
CCHCR1-228ENST00000509552 BATF2Q8N1L9 274 aa15.46■□□□□ 0.07
CCHCR1-228ENST00000509552 Q8NFD4 153 aa15.46■□□□□ 0.07
CCHCR1-228ENST00000509552 REPIN1Q9BWE0 567 aaKnown RBP15.46■□□□□ 0.07
CCHCR1-228ENST00000509552 PLSCR2Q9NRY7 297 aa15.46■□□□□ 0.07
CCHCR1-228ENST00000509552 A0A096LPE4 126 aa15.45■□□□□ 0.06
CCHCR1-228ENST00000509552 A0A1W2PPZ6 126 aa15.45■□□□□ 0.06
CCHCR1-228ENST00000509552 AGPAT2O15120 278 aa15.45■□□□□ 0.06
CCHCR1-228ENST00000509552 SFTA3P0C7M3 94 aa15.45■□□□□ 0.06
CCHCR1-228ENST00000509552 RFC3P40938 356 aa15.45■□□□□ 0.06
CCHCR1-228ENST00000509552 P2RY1P47900 373 aa15.45■□□□□ 0.06
CCHCR1-228ENST00000509552 LHX2P50458 406 aa15.45■□□□□ 0.06
CCHCR1-228ENST00000509552 SRPXP78539 464 aa15.45■□□□□ 0.06
CCHCR1-228ENST00000509552 PRDX4Q13162 271 aa15.45■□□□□ 0.06
CCHCR1-228ENST00000509552 MRPL21Q7Z2W9 205 aaKnown RBP15.45■□□□□ 0.06
CCHCR1-228ENST00000509552 FAM185AQ8N0U4 392 aa15.45■□□□□ 0.06
CCHCR1-228ENST00000509552 EXTL1Q92935 676 aa15.45■□□□□ 0.06
CCHCR1-228ENST00000509552 DDA1Q9BW61 102 aa15.45■□□□□ 0.06
CCHCR1-228ENST00000509552 ZNF703Q9H7S9 590 aaPredicted RBP15.45■□□□□ 0.06
CCHCR1-228ENST00000509552 ABI3Q9P2A4 366 aa15.45■□□□□ 0.06
CCHCR1-228ENST00000509552 VPS13AQ96RL7 3174 aa15.45■□□□□ 0.06
CCHCR1-228ENST00000509552 FRYLO94915 3013 aa15.45■□□□□ 0.06
CCHCR1-228ENST00000509552 PQLC2LA1A4F0 135 aa15.45■□□□□ 0.06
CCHCR1-228ENST00000509552 C5orf49A4QMS7 147 aa15.45■□□□□ 0.06
CCHCR1-228ENST00000509552 CD5P06127 495 aa15.45■□□□□ 0.06
CCHCR1-228ENST00000509552 NPBWR1P48145 328 aa15.45■□□□□ 0.06
CCHCR1-228ENST00000509552 ZXDAP98168 799 aa15.45■□□□□ 0.06
CCHCR1-228ENST00000509552 CALHM2Q9HA72 323 aa15.45■□□□□ 0.06
CCHCR1-228ENST00000509552 MLXQ9UH92 298 aa15.45■□□□□ 0.06
CCHCR1-228ENST00000509552 C3orf85A0A1B0GTC6 90 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 PRSS44E7EML9 344 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 NEURL1O76050 574 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 SEC11BP0C7V7 166 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 BCL3P20749 454 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 CD80P33681 288 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 HAAOP46952 286 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 DVL1P1P54792 670 aaPredicted RBP15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 IGSF11Q5DX21 431 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 CLEC9AQ6UXN8 241 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 Q6ZPA2 131 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 TUSC5Q8IXB3 177 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 SAXO1Q8IYX7 474 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 OR52M1Q8NGK5 317 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 SLAMF9Q96A28 289 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 PRRG4Q9BZD6 226 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 ARV1Q9H2C2 271 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 PLA2G2EQ9NZK7 142 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 PRELID3BQ9Y3B1 194 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 MPPED1O15442 326 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 HLA-HP01893 362 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 GLAP06280 429 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 COX5BP10606 129 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 GNMTQ14749 295 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 HFEQ30201 348 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 MEX3BQ6ZN04 569 aaKnown RBP15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 Q6ZS49 121 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 DPPA2Q7Z7J5 298 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 ZDHHC23Q8IYP9 409 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 SLC35G3Q8N808 338 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 APOBEC3DQ96AK3 386 aaPredicted RBP15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 SIGLEC12Q96PQ1 595 aa15.44■□□□□ 0.06
CCHCR1-228ENST00000509552 TSPAN15O95858 294 aa15.43■□□□□ 0.06
CCHCR1-228ENST00000509552 GPM6AP51674 278 aa15.43■□□□□ 0.06
CCHCR1-228ENST00000509552 CLDN18P56856 261 aa15.43■□□□□ 0.06
CCHCR1-228ENST00000509552 FGF12P61328 243 aa15.43■□□□□ 0.06
CCHCR1-228ENST00000509552 SRSF7Q16629 238 aaKnown RBP eCLIP15.43■□□□□ 0.06
CCHCR1-228ENST00000509552 CEACAM21Q3KPI0 293 aa15.43■□□□□ 0.06
CCHCR1-228ENST00000509552 TCEAL6Q6IPX3 200 aa15.43■□□□□ 0.06
CCHCR1-228ENST00000509552 TMEM105Q8N8V8 129 aa15.43■□□□□ 0.06
CCHCR1-228ENST00000509552 TCEAL3Q969E4 200 aa15.43■□□□□ 0.06
CCHCR1-228ENST00000509552 TP53RKQ96S44 253 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms