RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 GNG3P63215 75 aa12.71□□□□□ -0.38
PHF3-209ENST00000509330 ALKAL2Q6UX46 152 aa12.71□□□□□ -0.38
PHF3-209ENST00000509330 PRR18Q8N4B5 295 aa12.71□□□□□ -0.38
PHF3-209ENST00000509330 METTL8Q9H825 291 aaKnown RBP12.71□□□□□ -0.38
PHF3-209ENST00000509330 IL36GQ9NZH8 169 aa12.71□□□□□ -0.38
PHF3-209ENST00000509330 COMMD9Q9P000 198 aa12.71□□□□□ -0.38
PHF3-209ENST00000509330 GSKIPQ9P0R6 139 aa12.71□□□□□ -0.38
PHF3-209ENST00000509330 C14orf166Q9Y224 244 aaKnown RBP12.71□□□□□ -0.38
PHF3-209ENST00000509330 TEX13DA0A0J9YY54 714 aaPredicted RBP12.7□□□□□ -0.38
PHF3-209ENST00000509330 AHRRA9YTQ3 701 aa12.7□□□□□ -0.38
PHF3-209ENST00000509330 CEBPDP49716 269 aaPredicted RBP12.7□□□□□ -0.38
PHF3-209ENST00000509330 ZNF83P51522 516 aa12.7□□□□□ -0.38
PHF3-209ENST00000509330 FGF12P61328 243 aa12.7□□□□□ -0.38
PHF3-209ENST00000509330 NSUN5P2Q63ZY6 315 aa12.7□□□□□ -0.38
PHF3-209ENST00000509330 ZNF826PQ6ZT77 177 aa12.7□□□□□ -0.38
PHF3-209ENST00000509330 TMUB2Q71RG4 321 aa12.7□□□□□ -0.38
PHF3-209ENST00000509330 ZNF546Q86UE3 836 aa12.7□□□□□ -0.38
PHF3-209ENST00000509330 SPACA3Q8IXA5 215 aa12.7□□□□□ -0.38
PHF3-209ENST00000509330 OR11L1Q8NGX0 322 aa12.7□□□□□ -0.38
PHF3-209ENST00000509330 KLF14Q8TD94 323 aaPredicted RBP12.7□□□□□ -0.38
PHF3-209ENST00000509330 UFSP2Q9NUQ7 469 aa12.7□□□□□ -0.38
PHF3-209ENST00000509330 SPDEFO95238 335 aa12.7□□□□□ -0.38
PHF3-209ENST00000509330 BMP5P22003 454 aa12.7□□□□□ -0.38
PHF3-209ENST00000509330 VHLLQ6RSH7 139 aa12.7□□□□□ -0.38
PHF3-209ENST00000509330 MRPS24Q96EL2 167 aaKnown RBP12.7□□□□□ -0.38
PHF3-209ENST00000509330 ZNF286AQ9HBT8 521 aa12.7□□□□□ -0.38
PHF3-209ENST00000509330 MYOZ1Q9NP98 299 aaPredicted RBP12.7□□□□□ -0.38
PHF3-209ENST00000509330 NECAP2Q9NVZ3 263 aa12.7□□□□□ -0.38
PHF3-209ENST00000509330 KALRNO60229 2985 aa12.7□□□□□ -0.38
PHF3-209ENST00000509330 MKRN2OSH3BPM6 223 aa12.69□□□□□ -0.38
PHF3-209ENST00000509330 SIRPB1O00241 398 aa12.69□□□□□ -0.38
PHF3-209ENST00000509330 SFT2D2O95562 160 aa12.69□□□□□ -0.38
PHF3-209ENST00000509330 SCTP09683 121 aa12.69□□□□□ -0.38
PHF3-209ENST00000509330 OR2A2Q6IF42 318 aa12.69□□□□□ -0.38
PHF3-209ENST00000509330 IGFL3Q6UXB1 125 aa12.69□□□□□ -0.38
PHF3-209ENST00000509330 ZNF767PQ75MW2 155 aa12.69□□□□□ -0.38
PHF3-209ENST00000509330 PCDHB16Q9NRJ7 776 aa12.69□□□□□ -0.38
PHF3-209ENST00000509330 OR14J1Q9UGF5 321 aa12.69□□□□□ -0.38
PHF3-209ENST00000509330 TAS2R31P59538 309 aa12.69□□□□□ -0.38
PHF3-209ENST00000509330 PRR30Q53SZ7 412 aaPredicted RBP12.69□□□□□ -0.38
PHF3-209ENST00000509330 KIAA2026Q5HYC2 2103 aa12.69□□□□□ -0.38
PHF3-209ENST00000509330 INO80CQ6PI98 192 aaPredicted RBP12.69□□□□□ -0.38
PHF3-209ENST00000509330 PEG10Q86TG7 708 aaKnown RBP12.69□□□□□ -0.38
PHF3-209ENST00000509330 ZNF573Q86YE8 665 aa12.69□□□□□ -0.38
PHF3-209ENST00000509330 MPC1Q9Y5U8 109 aa12.69□□□□□ -0.38
PHF3-209ENST00000509330 COX5AP20674 150 aa12.69□□□□□ -0.38
PHF3-209ENST00000509330 S100A11P31949 105 aa12.69□□□□□ -0.38
PHF3-209ENST00000509330 PIGPP57054 158 aa12.69□□□□□ -0.38
PHF3-209ENST00000509330 ZNF154Q13106 437 aa12.69□□□□□ -0.38
PHF3-209ENST00000509330 C20orf204Q6ZNR8 217 aa12.69□□□□□ -0.38
PHF3-209ENST00000509330 SCCPDHQ8NBX0 429 aa12.69□□□□□ -0.38
PHF3-209ENST00000509330 MBD2Q9UBB5 411 aa12.69□□□□□ -0.38
PHF3-209ENST00000509330 RFPL4AA6NLU0 287 aa12.68□□□□□ -0.38
PHF3-209ENST00000509330 RFPL4AL1F8VTS6 287 aa12.68□□□□□ -0.38
PHF3-209ENST00000509330 MPPED2Q15777 294 aa12.68□□□□□ -0.38
PHF3-209ENST00000509330 ZNF474Q6S9Z5 364 aaPredicted RBP12.68□□□□□ -0.38
PHF3-209ENST00000509330 BHLHA15Q7RTS1 189 aaPredicted RBP12.68□□□□□ -0.38
PHF3-209ENST00000509330 DPPA2Q7Z7J5 298 aa12.68□□□□□ -0.38
PHF3-209ENST00000509330 FAM58AQ8N1B3 248 aa12.68□□□□□ -0.38
PHF3-209ENST00000509330 SUMF2Q8NBJ7 301 aa12.68□□□□□ -0.38
PHF3-209ENST00000509330 OR10C1Q96KK4 312 aa12.68□□□□□ -0.38
PHF3-209ENST00000509330 PLSCR4Q9NRQ2 329 aa12.68□□□□□ -0.38
PHF3-209ENST00000509330 DUSP13Q9UII6 198 aa12.68□□□□□ -0.38
PHF3-209ENST00000509330 NCOR2Q9Y618 2525 aa12.68□□□□□ -0.38
PHF3-209ENST00000509330 A6NLC8 198 aa12.68□□□□□ -0.38
PHF3-209ENST00000509330 RCC1P18754 421 aaPredicted RBP12.68□□□□□ -0.38
PHF3-209ENST00000509330 DTYMKP23919 212 aa12.68□□□□□ -0.38
PHF3-209ENST00000509330 OR8G1Q15617 311 aa12.68□□□□□ -0.38
PHF3-209ENST00000509330 PRAMEF6Q5VXH4 476 aa12.68□□□□□ -0.38
PHF3-209ENST00000509330 FAM180AQ6UWF9 173 aa12.68□□□□□ -0.38
PHF3-209ENST00000509330 S100PBPQ96BU1 408 aa12.68□□□□□ -0.38
PHF3-209ENST00000509330 OR51I2Q9H344 312 aa12.68□□□□□ -0.38
PHF3-209ENST00000509330 OPA3Q9H6K4 179 aa12.68□□□□□ -0.38
PHF3-209ENST00000509330 M0R1B8 84 aa12.67□□□□□ -0.38
PHF3-209ENST00000509330 WNT9BO14905 357 aa12.67□□□□□ -0.38
PHF3-209ENST00000509330 TIMM8AO60220 97 aaPredicted RBP12.67□□□□□ -0.38
PHF3-209ENST00000509330 IGKV3-15P01624 115 aa12.67□□□□□ -0.38
PHF3-209ENST00000509330 ZNF728P0DKX0 622 aa12.67□□□□□ -0.38
PHF3-209ENST00000509330 RPS2P15880 293 aaKnown RBP12.67□□□□□ -0.38
PHF3-209ENST00000509330 CBR1P16152 277 aa12.67□□□□□ -0.38
PHF3-209ENST00000509330 AADACP22760 399 aa12.67□□□□□ -0.38
PHF3-209ENST00000509330 PPA1Q15181 289 aa12.67□□□□□ -0.38
PHF3-209ENST00000509330 ABCA11PQ4W5N1 156 aa12.67□□□□□ -0.38
PHF3-209ENST00000509330 ZNF660Q6AZW8 331 aaPredicted RBP12.67□□□□□ -0.38
PHF3-209ENST00000509330 GSG1LQ6UXU4 331 aa12.67□□□□□ -0.38
PHF3-209ENST00000509330 FBXW12Q6X9E4 464 aa12.67□□□□□ -0.38
PHF3-209ENST00000509330 TMEM185AQ8NFB2 350 aa12.67□□□□□ -0.38
PHF3-209ENST00000509330 RTL8AQ9BWD3 113 aa12.67□□□□□ -0.38
PHF3-209ENST00000509330 EDARQ9UNE0 448 aa12.67□□□□□ -0.38
PHF3-209ENST00000509330 IGHV1-18A0A0C4DH31 117 aa12.67□□□□□ -0.38
PHF3-209ENST00000509330 CGAP01215 116 aa12.67□□□□□ -0.38
PHF3-209ENST00000509330 FAM87AP0C7U9 286 aa12.67□□□□□ -0.38
PHF3-209ENST00000509330 S100A10P60903 97 aa12.67□□□□□ -0.38
PHF3-209ENST00000509330 C11orf87Q6NUJ2 197 aa12.67□□□□□ -0.38
PHF3-209ENST00000509330 FAHD2BQ6P2I3 314 aaPredicted RBP12.67□□□□□ -0.38
PHF3-209ENST00000509330 IL1F10Q8WWZ1 152 aa12.67□□□□□ -0.38
PHF3-209ENST00000509330 GTF3AQ92664 365 aaKnown RBP12.67□□□□□ -0.38
PHF3-209ENST00000509330 FAHD2AQ96GK7 314 aa12.67□□□□□ -0.38
PHF3-209ENST00000509330 FAM210AQ96ND0 272 aa12.67□□□□□ -0.38
PHF3-209ENST00000509330 SCGB3A2Q96PL1 93 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms