RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 LUMP51884 338 aaPredicted RBP12.65□□□□□ -0.38
CXCL1-202ENST00000509101 CXCR4P61073 352 aa12.65□□□□□ -0.38
CXCL1-202ENST00000509101 RBM39Q14498 530 aaKnown RBP12.65□□□□□ -0.38
CXCL1-202ENST00000509101 HLA-DRB5Q30154 266 aa12.65□□□□□ -0.38
CXCL1-202ENST00000509101 DNAL1Q4LDG9 190 aa12.65□□□□□ -0.38
CXCL1-202ENST00000509101 HEPN1Q6WQI6 88 aa12.65□□□□□ -0.38
CXCL1-202ENST00000509101 Q6ZSR3 168 aa12.65□□□□□ -0.38
CXCL1-202ENST00000509101 ADGRG5Q8IZF4 528 aa12.65□□□□□ -0.38
CXCL1-202ENST00000509101 HS3ST5Q8IZT8 346 aa12.65□□□□□ -0.38
CXCL1-202ENST00000509101 ZNF556Q9HAH1 456 aa12.65□□□□□ -0.38
CXCL1-202ENST00000509101 SLC25A19Q9HC21 320 aa12.65□□□□□ -0.38
CXCL1-202ENST00000509101 TVP23BQ9NYZ1 205 aa12.65□□□□□ -0.38
CXCL1-202ENST00000509101 LINC00527Q9UJ94 153 aa12.65□□□□□ -0.38
CXCL1-202ENST00000509101 LSM4Q9Y4Z0 139 aaKnown RBP12.65□□□□□ -0.38
CXCL1-202ENST00000509101 TRGV10A0A0A0MS01 117 aa12.64□□□□□ -0.39
CXCL1-202ENST00000509101 BUB1B-PAK6H3BSN5 160 aa12.64□□□□□ -0.39
CXCL1-202ENST00000509101 RAMP3O60896 148 aa12.64□□□□□ -0.39
CXCL1-202ENST00000509101 E2F6O75461 281 aa12.64□□□□□ -0.39
CXCL1-202ENST00000509101 PRKACAP17612 351 aa12.64□□□□□ -0.39
CXCL1-202ENST00000509101 BCL3P20749 454 aa12.64□□□□□ -0.39
CXCL1-202ENST00000509101 CCL1P22362 96 aa12.64□□□□□ -0.39
CXCL1-202ENST00000509101 ERP29P30040 261 aaKnown RBP12.64□□□□□ -0.39
CXCL1-202ENST00000509101 SLC6A1P30531 599 aa12.64□□□□□ -0.39
CXCL1-202ENST00000509101 MNDAP41218 407 aa12.64□□□□□ -0.39
CXCL1-202ENST00000509101 NPBWR2P48146 333 aa12.64□□□□□ -0.39
CXCL1-202ENST00000509101 KLHL22Q53GT1 634 aa12.64□□□□□ -0.39
CXCL1-202ENST00000509101 SLC35F2Q8IXU6 374 aa12.64□□□□□ -0.39
CXCL1-202ENST00000509101 ENTHD1Q8IYW4 607 aa12.64□□□□□ -0.39
CXCL1-202ENST00000509101 CHPT1Q8WUD6 406 aa12.64□□□□□ -0.39
CXCL1-202ENST00000509101 BORCS8Q96FH0 119 aa12.64□□□□□ -0.39
CXCL1-202ENST00000509101 LRGUKQ96M69 825 aa12.64□□□□□ -0.39
CXCL1-202ENST00000509101 TEX12Q9BXU0 123 aa12.64□□□□□ -0.39
CXCL1-202ENST00000509101 SNX5Q9Y5X3 404 aa12.64□□□□□ -0.39
CXCL1-202ENST00000509101 LYSTQ99698 3801 aa12.63□□□□□ -0.39
CXCL1-202ENST00000509101 SERPINE3A8MV23 424 aa12.63□□□□□ -0.39
CXCL1-202ENST00000509101 GNGT2O14610 69 aa12.63□□□□□ -0.39
CXCL1-202ENST00000509101 TOR1AO14656 332 aa12.63□□□□□ -0.39
CXCL1-202ENST00000509101 ENTPD6O75354 484 aa12.63□□□□□ -0.39
CXCL1-202ENST00000509101 GATBO75879 557 aaKnown RBP12.63□□□□□ -0.39
CXCL1-202ENST00000509101 RPP14O95059 124 aaKnown RBP12.63□□□□□ -0.39
CXCL1-202ENST00000509101 SNRNP70P08621 437 aaKnown RBP12.63□□□□□ -0.39
CXCL1-202ENST00000509101 CD34P28906 385 aa12.63□□□□□ -0.39
CXCL1-202ENST00000509101 POU3F4P49335 361 aa12.63□□□□□ -0.39
CXCL1-202ENST00000509101 FUT6P51993 359 aa12.63□□□□□ -0.39
CXCL1-202ENST00000509101 ACTR3P61158 418 aa12.63□□□□□ -0.39
CXCL1-202ENST00000509101 CCDC144NLQ6NUI1 221 aa12.63□□□□□ -0.39
CXCL1-202ENST00000509101 Q8IYB0 196 aa12.63□□□□□ -0.39
CXCL1-202ENST00000509101 FAM58AQ8N1B3 248 aa12.63□□□□□ -0.39
CXCL1-202ENST00000509101 CANT1Q8WVQ1 401 aa12.63□□□□□ -0.39
CXCL1-202ENST00000509101 CREB3L1Q96BA8 519 aa12.63□□□□□ -0.39
CXCL1-202ENST00000509101 RAX2Q96IS3 184 aa12.63□□□□□ -0.39
CXCL1-202ENST00000509101 SEBOXQ9HB31 216 aaPredicted RBP12.63□□□□□ -0.39
CXCL1-202ENST00000509101 ZFP57Q9NU63 452 aa12.63□□□□□ -0.39
CXCL1-202ENST00000509101 GLS2Q9UI32 602 aa12.63□□□□□ -0.39
CXCL1-202ENST00000509101 MRM2Q9UI43 246 aaKnown RBP12.63□□□□□ -0.39
CXCL1-202ENST00000509101 POMPQ9Y244 141 aa12.63□□□□□ -0.39
CXCL1-202ENST00000509101 TRBV2A0A0J9YWF9 115 aa12.62□□□□□ -0.39
CXCL1-202ENST00000509101 SYT7O43581 403 aa12.62□□□□□ -0.39
CXCL1-202ENST00000509101 FAM106CPP0CH98 169 aa12.62□□□□□ -0.39
CXCL1-202ENST00000509101 PRKACGP22612 351 aa12.62□□□□□ -0.39
CXCL1-202ENST00000509101 GLIPR1P48060 266 aa12.62□□□□□ -0.39
CXCL1-202ENST00000509101 KPNB1Q14974 876 aaKnown RBP12.62□□□□□ -0.39
CXCL1-202ENST00000509101 ZNF146Q15072 292 aa12.62□□□□□ -0.39
CXCL1-202ENST00000509101 UTF1Q5T230 341 aa12.62□□□□□ -0.39
CXCL1-202ENST00000509101 BCDIN3DQ7Z5W3 292 aaKnown RBP12.62□□□□□ -0.39
CXCL1-202ENST00000509101 ZNF695Q8IW36 515 aa12.62□□□□□ -0.39
CXCL1-202ENST00000509101 C5orf56Q8N8D9 126 aa12.62□□□□□ -0.39
CXCL1-202ENST00000509101 OR56B4Q8NH76 319 aa12.62□□□□□ -0.39
CXCL1-202ENST00000509101 TOMM40LQ969M1 308 aa12.62□□□□□ -0.39
CXCL1-202ENST00000509101 CHST5Q9GZS9 411 aa12.62□□□□□ -0.39
CXCL1-202ENST00000509101 TAS2R3Q9NYW6 316 aa12.62□□□□□ -0.39
CXCL1-202ENST00000509101 AQP12BA6NM10 295 aa12.61□□□□□ -0.39
CXCL1-202ENST00000509101 OOSP1A8MZH6 123 aa12.61□□□□□ -0.39
CXCL1-202ENST00000509101 ZNF670-ZNF695F2Z2N8 137 aa12.61□□□□□ -0.39
CXCL1-202ENST00000509101 LY6LH3BQJ8 138 aa12.61□□□□□ -0.39
CXCL1-202ENST00000509101 M0R129 80 aa12.61□□□□□ -0.39
CXCL1-202ENST00000509101 ZFPL1O95159 310 aa12.61□□□□□ -0.39
CXCL1-202ENST00000509101 CYB5AP00167 134 aa12.61□□□□□ -0.39
CXCL1-202ENST00000509101 PTGFRP43088 359 aa12.61□□□□□ -0.39
CXCL1-202ENST00000509101 PRRX1P54821 245 aa12.61□□□□□ -0.39
CXCL1-202ENST00000509101 AESQ08117 197 aa12.61□□□□□ -0.39
CXCL1-202ENST00000509101 FLOT2Q14254 428 aa12.61□□□□□ -0.39
CXCL1-202ENST00000509101 HES1Q14469 280 aa12.61□□□□□ -0.39
CXCL1-202ENST00000509101 DEFB136Q30KP8 78 aa12.61□□□□□ -0.39
CXCL1-202ENST00000509101 SPIN3Q5JUX0 258 aa12.61□□□□□ -0.39
CXCL1-202ENST00000509101 CASC10Q5T4H9 136 aa12.61□□□□□ -0.39
CXCL1-202ENST00000509101 AQP12AQ8IXF9 295 aa12.61□□□□□ -0.39
CXCL1-202ENST00000509101 OR4D6Q8NGJ1 314 aa12.61□□□□□ -0.39
CXCL1-202ENST00000509101 MUC7Q8TAX7 377 aa12.61□□□□□ -0.39
CXCL1-202ENST00000509101 CORO2AQ92828 525 aa12.61□□□□□ -0.39
CXCL1-202ENST00000509101 RPEQ96AT9 228 aa12.61□□□□□ -0.39
CXCL1-202ENST00000509101 ADGRL4Q9HBW9 690 aa12.61□□□□□ -0.39
CXCL1-202ENST00000509101 EXOSC4Q9NPD3 245 aaKnown RBP12.61□□□□□ -0.39
CXCL1-202ENST00000509101 ING3Q9NXR8 418 aa12.61□□□□□ -0.39
CXCL1-202ENST00000509101 CCL24O00175 119 aa12.6□□□□□ -0.39
CXCL1-202ENST00000509101 PRKYO43930 277 aa12.6□□□□□ -0.39
CXCL1-202ENST00000509101 OR2H2O95918 312 aa12.6□□□□□ -0.39
CXCL1-202ENST00000509101 TMEM11P17152 192 aa12.6□□□□□ -0.39
CXCL1-202ENST00000509101 NFYBP25208 207 aa12.6□□□□□ -0.39
CXCL1-202ENST00000509101 ECI1P42126 302 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms