RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 BAIAP2L2Q6UXY1 529 aa11.54□□□□□ -0.56
RAB28-205ENST00000508274 OR11H6Q8NGC7 330 aa11.54□□□□□ -0.56
RAB28-205ENST00000508274 OR4C13Q8NGP0 309 aa11.54□□□□□ -0.56
RAB28-205ENST00000508274 NKX3-1Q99801 234 aaPredicted RBP11.54□□□□□ -0.56
RAB28-205ENST00000508274 MMP27Q9H306 513 aa11.54□□□□□ -0.56
RAB28-205ENST00000508274 ZCCHC4Q9H5U6 513 aa11.54□□□□□ -0.56
RAB28-205ENST00000508274 SEBOXQ9HB31 216 aaPredicted RBP11.54□□□□□ -0.56
RAB28-205ENST00000508274 VGLL3A8MV65 326 aa11.53□□□□□ -0.56
RAB28-205ENST00000508274 MGST3O14880 152 aa11.53□□□□□ -0.56
RAB28-205ENST00000508274 WBP4O75554 376 aaKnown RBP11.53□□□□□ -0.56
RAB28-205ENST00000508274 KDM4BO94953 1096 aa11.53□□□□□ -0.56
RAB28-205ENST00000508274 BAG2O95816 211 aa11.53□□□□□ -0.56
RAB28-205ENST00000508274 GTF2A1P52655 376 aaPredicted RBP11.53□□□□□ -0.56
RAB28-205ENST00000508274 RAB40BQ12829 278 aa11.53□□□□□ -0.56
RAB28-205ENST00000508274 HABP2Q14520 560 aaPredicted RBP11.53□□□□□ -0.56
RAB28-205ENST00000508274 LPCAT4Q643R3 524 aa11.53□□□□□ -0.56
RAB28-205ENST00000508274 XAF1Q6GPH4 301 aa11.53□□□□□ -0.56
RAB28-205ENST00000508274 TRAPPC6BQ86SZ2 158 aa11.53□□□□□ -0.56
RAB28-205ENST00000508274 TMEM219Q86XT9 240 aa11.53□□□□□ -0.56
RAB28-205ENST00000508274 C11orf44Q8N8P7 122 aa11.53□□□□□ -0.56
RAB28-205ENST00000508274 OR5AK2Q8NH90 309 aa11.53□□□□□ -0.56
RAB28-205ENST00000508274 MRPL48Q96GC5 212 aaKnown RBP11.53□□□□□ -0.56
RAB28-205ENST00000508274 Q96MT0 163 aa11.53□□□□□ -0.56
RAB28-205ENST00000508274 NEK6Q9HC98 313 aa11.53□□□□□ -0.56
RAB28-205ENST00000508274 EXOSC4Q9NPD3 245 aaKnown RBP11.53□□□□□ -0.56
RAB28-205ENST00000508274 TCF19Q9Y242 345 aa11.53□□□□□ -0.56
RAB28-205ENST00000508274 TBL2Q9Y4P3 447 aaKnown RBP11.53□□□□□ -0.56
RAB28-205ENST00000508274 HILPDAQ9Y5L2 63 aa11.53□□□□□ -0.56
RAB28-205ENST00000508274 SESN1Q9Y6P5 492 aa11.53□□□□□ -0.56
RAB28-205ENST00000508274 IGHV2-26A0A0B4J1V2 119 aa11.52□□□□□ -0.57
RAB28-205ENST00000508274 EBAG9O00559 213 aa11.52□□□□□ -0.57
RAB28-205ENST00000508274 HCKP08631 526 aa11.52□□□□□ -0.57
RAB28-205ENST00000508274 LIMS3P0CW19 117 aa11.52□□□□□ -0.57
RAB28-205ENST00000508274 LIMS4P0CW20 117 aa11.52□□□□□ -0.57
RAB28-205ENST00000508274 KIR2DS4P43632 304 aa11.52□□□□□ -0.57
RAB28-205ENST00000508274 P2RX3P56373 397 aa11.52□□□□□ -0.57
RAB28-205ENST00000508274 ZP1P60852 638 aa11.52□□□□□ -0.57
RAB28-205ENST00000508274 SCN1BQ07699 218 aa11.52□□□□□ -0.57
RAB28-205ENST00000508274 IL18R1Q13478 541 aa11.52□□□□□ -0.57
RAB28-205ENST00000508274 C10orf67Q8IYJ2 551 aa11.52□□□□□ -0.57
RAB28-205ENST00000508274 TSEN15Q8WW01 171 aaKnown RBP11.52□□□□□ -0.57
RAB28-205ENST00000508274 RGP1Q92546 391 aaPredicted RBP11.52□□□□□ -0.57
RAB28-205ENST00000508274 FOXRED1Q96CU9 486 aaPredicted RBP11.52□□□□□ -0.57
RAB28-205ENST00000508274 MALSU1Q96EH3 234 aa11.52□□□□□ -0.57
RAB28-205ENST00000508274 COMMD4Q9H0A8 199 aa11.52□□□□□ -0.57
RAB28-205ENST00000508274 RANBP3Q9H6Z4 567 aaPredicted RBP11.52□□□□□ -0.57
RAB28-205ENST00000508274 RAB18Q9NP72 206 aa11.52□□□□□ -0.57
RAB28-205ENST00000508274 INPP5EQ9NRR6 644 aa11.52□□□□□ -0.57
RAB28-205ENST00000508274 MRPS18AQ9NVS2 196 aaKnown RBP11.52□□□□□ -0.57
RAB28-205ENST00000508274 GLS2Q9UI32 602 aa11.52□□□□□ -0.57
RAB28-205ENST00000508274 RPL36Q9Y3U8 105 aaKnown RBP11.52□□□□□ -0.57
RAB28-205ENST00000508274 FAM172BPA6NC97 362 aa11.51□□□□□ -0.57
RAB28-205ENST00000508274 TMEM212A6NML5 194 aa11.51□□□□□ -0.57
RAB28-205ENST00000508274 SH2D1BO14796 132 aa11.51□□□□□ -0.57
RAB28-205ENST00000508274 SULT1B1O43704 296 aa11.51□□□□□ -0.57
RAB28-205ENST00000508274 CLIC3O95833 236 aa11.51□□□□□ -0.57
RAB28-205ENST00000508274 ZNF44P15621 663 aa11.51□□□□□ -0.57
RAB28-205ENST00000508274 ERP29P30040 261 aaKnown RBP11.51□□□□□ -0.57
RAB28-205ENST00000508274 GLIPR1P48060 266 aa11.51□□□□□ -0.57
RAB28-205ENST00000508274 AESQ08117 197 aa11.51□□□□□ -0.57
RAB28-205ENST00000508274 KISS1Q15726 138 aa11.51□□□□□ -0.57
RAB28-205ENST00000508274 PRAMEF5Q5TYX0 476 aa11.51□□□□□ -0.57
RAB28-205ENST00000508274 Q6P435 159 aa11.51□□□□□ -0.57
RAB28-205ENST00000508274 PARP16Q8N5Y8 322 aa11.51□□□□□ -0.57
RAB28-205ENST00000508274 KLHDC1Q8N7A1 406 aa11.51□□□□□ -0.57
RAB28-205ENST00000508274 OR2T6Q8NHC8 308 aa11.51□□□□□ -0.57
RAB28-205ENST00000508274 CNIH3Q8TBE1 160 aa11.51□□□□□ -0.57
RAB28-205ENST00000508274 NPFFR1Q9GZQ6 430 aa11.51□□□□□ -0.57
RAB28-205ENST00000508274 TMEM133Q9H2Q1 129 aa11.51□□□□□ -0.57
RAB28-205ENST00000508274 ZNF702PQ9H963 129 aa11.51□□□□□ -0.57
RAB28-205ENST00000508274 ING3Q9NXR8 418 aa11.51□□□□□ -0.57
RAB28-205ENST00000508274 SMPD3Q9NY59 655 aaPredicted RBP11.51□□□□□ -0.57
RAB28-205ENST00000508274 DHDHQ9UQ10 334 aa11.51□□□□□ -0.57
RAB28-205ENST00000508274 A6NDX4 124 aa11.5□□□□□ -0.57
RAB28-205ENST00000508274 TMEM225BP0DP42 221 aa11.5□□□□□ -0.57
RAB28-205ENST00000508274 GDNFP39905 211 aa11.5□□□□□ -0.57
RAB28-205ENST00000508274 SOX2P48431 317 aa11.5□□□□□ -0.57
RAB28-205ENST00000508274 GBX2P52951 348 aaPredicted RBP11.5□□□□□ -0.57
RAB28-205ENST00000508274 HERPUD1Q15011 391 aa11.5□□□□□ -0.57
RAB28-205ENST00000508274 C2orf68Q2NKX9 166 aa11.5□□□□□ -0.57
RAB28-205ENST00000508274 OR2G6Q5TZ20 316 aa11.5□□□□□ -0.57
RAB28-205ENST00000508274 LIAT1Q6ZQX7 453 aa11.5□□□□□ -0.57
RAB28-205ENST00000508274 SERPINA12Q8IW75 414 aa11.5□□□□□ -0.57
RAB28-205ENST00000508274 OR51A2Q8NGJ7 313 aa11.5□□□□□ -0.57
RAB28-205ENST00000508274 OR5D14Q8NGL3 314 aa11.5□□□□□ -0.57
RAB28-205ENST00000508274 FAM110DQ8TAY7 271 aaPredicted RBP11.5□□□□□ -0.57
RAB28-205ENST00000508274 RPS4Y2Q8TD47 263 aa11.5□□□□□ -0.57
RAB28-205ENST00000508274 COQ2Q96H96 371 aa11.5□□□□□ -0.57
RAB28-205ENST00000508274 ABCB10Q9NRK6 738 aa11.5□□□□□ -0.57
RAB28-205ENST00000508274 UBE2J1Q9Y385 318 aaPredicted RBP11.5□□□□□ -0.57
RAB28-205ENST00000508274 PRKDCP78527 4128 aaKnown RBP11.5□□□□□ -0.57
RAB28-205ENST00000508274 TGP01266 2768 aa11.5□□□□□ -0.57
RAB28-205ENST00000508274 A0A0G2JK05 382 aa11.5□□□□□ -0.57
RAB28-205ENST00000508274 SLC33A1O00400 549 aaPredicted RBP11.5□□□□□ -0.57
RAB28-205ENST00000508274 HSPB6O14558 160 aa11.5□□□□□ -0.57
RAB28-205ENST00000508274 CCDC159P0C7I6 412 aa11.5□□□□□ -0.57
RAB28-205ENST00000508274 VSIG10L2P0DP72 767 aa11.5□□□□□ -0.57
RAB28-205ENST00000508274 LMO1P25800 156 aa11.5□□□□□ -0.57
RAB28-205ENST00000508274 ETV1P50549 477 aa11.5□□□□□ -0.57
RAB28-205ENST00000508274 ATXN7L3Q14CW9 347 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms