RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 TRAV24A0A0B4J272 114 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 METTL21EPA6NDL7 271 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 FAM90A10PA6NDY2 464 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 FAM90A18PA6NE21 464 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 FAM90A16PA6NEW6 464 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 FAM90A20PA6NIJ5 464 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 FAM90A8PA6NJQ4 464 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 FAM90A7PA6NKC0 464 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 FAM90A22PA8MWA6 464 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 FAM90A12PA8MX19 464 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 FAM90A5PA8MXJ8 464 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 FAM90A23PA8MXZ1 464 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 VWC2LB2RUY7 222 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 FAM25AB3EWG3 89 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 FAM25CB3EWG5 89 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 FAM25GB3EWG6 89 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 SLC33A1O00400 549 aaPredicted RBP11.83□□□□□ -0.52
RNF4-208ENST00000507247 SH2D1BO14796 132 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 FCN3O75636 299 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 FAM90A15PP0C7V4 464 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 FAM90A13PP0C7W8 464 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 FAM90A14PP0C7W9 464 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 FAM90A24PP0C7X0 464 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 ZNF44P15621 663 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 CDK2P24941 298 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 CHATP28329 748 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 BLVRBP30043 206 aaPredicted RBP11.83□□□□□ -0.52
RNF4-208ENST00000507247 TNFSF8P32971 234 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 PITPNBP48739 271 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 TMEM50BP56557 158 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 MADCAM1Q13477 382 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 CLEC12BQ2HXU8 276 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 TMEM155Q4W5P6 130 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 PLAC9Q5JTB6 97 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 ATPAF1Q5TC12 328 aaPredicted RBP11.83□□□□□ -0.52
RNF4-208ENST00000507247 ZNF788Q6ZQV5 615 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 IZUMO1Q8IYV9 350 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 FAM216BQ8N7L0 139 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 OR4M1Q8NGD0 313 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 OR56B1Q8NGI3 324 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 OR6Q1Q8NGQ2 317 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 OR10R2Q8NGX6 335 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 RAB40AQ8WXH6 277 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 SDSLQ96GA7 329 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 WDFY2Q96P53 400 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 PIMREGQ9BSJ6 248 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 NARFLQ9H6Q4 476 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 IFT22Q9H7X7 185 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 RCC2Q9P258 522 aaKnown RBP11.83□□□□□ -0.52
RNF4-208ENST00000507247 CTSZQ9UBR2 303 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 MAB21L2Q9Y586 359 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 CREBBPQ92793 2442 aa11.83□□□□□ -0.52
RNF4-208ENST00000507247 TMEM82A0PJX8 343 aa11.82□□□□□ -0.52
RNF4-208ENST00000507247 CEACAM18A8MTB9 384 aa11.82□□□□□ -0.52
RNF4-208ENST00000507247 NDUFS8O00217 210 aa11.82□□□□□ -0.52
RNF4-208ENST00000507247 DEGS1O15121 323 aa11.82□□□□□ -0.52
RNF4-208ENST00000507247 PSPNO60542 156 aa11.82□□□□□ -0.52
RNF4-208ENST00000507247 PDCD6O75340 191 aa11.82□□□□□ -0.52
RNF4-208ENST00000507247 ZNF737O75373 536 aa11.82□□□□□ -0.52
RNF4-208ENST00000507247 LMO1P25800 156 aa11.82□□□□□ -0.52
RNF4-208ENST00000507247 NKAPLQ5M9Q1 402 aa11.82□□□□□ -0.52
RNF4-208ENST00000507247 Q5PR19 223 aa11.82□□□□□ -0.52
RNF4-208ENST00000507247 ATAD3CQ5T2N8 411 aa11.82□□□□□ -0.52
RNF4-208ENST00000507247 CNIH2Q6PI25 160 aa11.82□□□□□ -0.52
RNF4-208ENST00000507247 BRICD5Q6PL45 260 aa11.82□□□□□ -0.52
RNF4-208ENST00000507247 DCDC5Q6ZRR9 648 aa11.82□□□□□ -0.52
RNF4-208ENST00000507247 C6orf201Q7Z4U5 140 aa11.82□□□□□ -0.52
RNF4-208ENST00000507247 MUC20Q8N307 709 aaPredicted RBP11.82□□□□□ -0.52
RNF4-208ENST00000507247 FGFRL1Q8N441 504 aa11.82□□□□□ -0.52
RNF4-208ENST00000507247 ZNRF1Q8ND25 227 aa11.82□□□□□ -0.52
RNF4-208ENST00000507247 POM121Q96HA1 1249 aa11.82□□□□□ -0.52
RNF4-208ENST00000507247 DNTTIP1Q9H147 329 aa11.82□□□□□ -0.52
RNF4-208ENST00000507247 ZNF665Q9H7R5 613 aa11.82□□□□□ -0.52
RNF4-208ENST00000507247 GLS2Q9UI32 602 aa11.82□□□□□ -0.52
RNF4-208ENST00000507247 PEX16Q9Y5Y5 336 aa11.82□□□□□ -0.52
RNF4-208ENST00000507247 ABCA12Q86UK0 2595 aa11.81□□□□□ -0.52
RNF4-208ENST00000507247 NKX6-3A6NJ46 265 aa11.81□□□□□ -0.52
RNF4-208ENST00000507247 HSPB6O14558 160 aa11.81□□□□□ -0.52
RNF4-208ENST00000507247 SIGLEC5O15389 551 aa11.81□□□□□ -0.52
RNF4-208ENST00000507247 TMPRSS2O15393 492 aa11.81□□□□□ -0.52
RNF4-208ENST00000507247 ADAM20O43506 726 aa11.81□□□□□ -0.52
RNF4-208ENST00000507247 CHRM2P08172 466 aa11.81□□□□□ -0.52
RNF4-208ENST00000507247 FUT3P21217 361 aa11.81□□□□□ -0.52
RNF4-208ENST00000507247 NR4A2P43354 598 aa11.81□□□□□ -0.52
RNF4-208ENST00000507247 DSCR9P59020 149 aa11.81□□□□□ -0.52
RNF4-208ENST00000507247 KCNJ8Q15842 424 aa11.81□□□□□ -0.52
RNF4-208ENST00000507247 FAM189A2Q15884 450 aa11.81□□□□□ -0.52
RNF4-208ENST00000507247 OLFML2AQ68BL7 652 aa11.81□□□□□ -0.52
RNF4-208ENST00000507247 RAB12Q6IQ22 244 aa11.81□□□□□ -0.52
RNF4-208ENST00000507247 C17orf107Q6ZR85 190 aa11.81□□□□□ -0.52
RNF4-208ENST00000507247 BPIFB2Q8N4F0 458 aa11.81□□□□□ -0.52
RNF4-208ENST00000507247 ASCC1Q8N9N2 400 aaKnown RBP11.81□□□□□ -0.52
RNF4-208ENST00000507247 SUMF2Q8NBJ7 301 aa11.81□□□□□ -0.52
RNF4-208ENST00000507247 OR4S1Q8NGB4 309 aa11.81□□□□□ -0.52
RNF4-208ENST00000507247 DYRK2Q92630 601 aa11.81□□□□□ -0.52
RNF4-208ENST00000507247 S100A16Q96FQ6 103 aaKnown RBP11.81□□□□□ -0.52
RNF4-208ENST00000507247 DIRAS2Q96HU8 199 aa11.81□□□□□ -0.52
RNF4-208ENST00000507247 ARHGAP5-AS1Q96IT6 56 aa11.81□□□□□ -0.52
RNF4-208ENST00000507247 NEDD4LQ96PU5 975 aa11.81□□□□□ -0.52
RNF4-208ENST00000507247 SULT4A1Q9BR01 284 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms