RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 ARL6IP5O75915 188 aa16.37■□□□□ 0.21
SNX25-204ENST00000506896 RGS9O75916 674 aaPredicted RBP16.37■□□□□ 0.21
SNX25-204ENST00000506896 MMP9P14780 707 aa16.37■□□□□ 0.21
SNX25-204ENST00000506896 FPR2P25090 351 aa16.37■□□□□ 0.21
SNX25-204ENST00000506896 DUSP1P28562 367 aa16.37■□□□□ 0.21
SNX25-204ENST00000506896 SNU13P55769 128 aaKnown RBP16.37■□□□□ 0.21
SNX25-204ENST00000506896 BPIFB3P59826 476 aa16.37■□□□□ 0.21
SNX25-204ENST00000506896 ARF6P62330 175 aa16.37■□□□□ 0.21
SNX25-204ENST00000506896 RPS25P62851 125 aaKnown RBP16.37■□□□□ 0.21
SNX25-204ENST00000506896 RPL31P62899 125 aaKnown RBP16.37■□□□□ 0.21
SNX25-204ENST00000506896 GPR176Q14439 515 aa16.37■□□□□ 0.21
SNX25-204ENST00000506896 PDCD1Q15116 288 aa16.37■□□□□ 0.21
SNX25-204ENST00000506896 KLF17Q5JT82 389 aaPredicted RBP16.37■□□□□ 0.21
SNX25-204ENST00000506896 C1orf122Q6ZSJ8 110 aa16.37■□□□□ 0.21
SNX25-204ENST00000506896 CHST4Q8NCG5 386 aa16.37■□□□□ 0.21
SNX25-204ENST00000506896 FOXRED1Q96CU9 486 aaPredicted RBP16.37■□□□□ 0.21
SNX25-204ENST00000506896 UQCC2Q9BRT2 126 aa16.37■□□□□ 0.21
SNX25-204ENST00000506896 PCGF1Q9BSM1 259 aa16.37■□□□□ 0.21
SNX25-204ENST00000506896 SLITRK2Q9H156 845 aa16.37■□□□□ 0.21
SNX25-204ENST00000506896 ING4Q9UNL4 249 aa16.37■□□□□ 0.21
SNX25-204ENST00000506896 SF3B6Q9Y3B4 125 aaKnown RBP16.37■□□□□ 0.21
SNX25-204ENST00000506896 M0R1W7 72 aa16.36■□□□□ 0.21
SNX25-204ENST00000506896 CSTBP04080 98 aaKnown RBP16.36■□□□□ 0.21
SNX25-204ENST00000506896 CALCBP10092 127 aa16.36■□□□□ 0.21
SNX25-204ENST00000506896 SRMP19623 302 aa16.36■□□□□ 0.21
SNX25-204ENST00000506896 GABRR1P24046 479 aa16.36■□□□□ 0.21
SNX25-204ENST00000506896 LMO1P25800 156 aa16.36■□□□□ 0.21
SNX25-204ENST00000506896 BLMHQ13867 455 aa16.36■□□□□ 0.21
SNX25-204ENST00000506896 GPR157Q5UAW9 335 aa16.36■□□□□ 0.21
SNX25-204ENST00000506896 C17orf107Q6ZR85 190 aa16.36■□□□□ 0.21
SNX25-204ENST00000506896 GDPD3Q7L5L3 318 aa16.36■□□□□ 0.21
SNX25-204ENST00000506896 FAM185AQ8N0U4 392 aa16.36■□□□□ 0.21
SNX25-204ENST00000506896 OR51T1Q8NGJ9 327 aa16.36■□□□□ 0.21
SNX25-204ENST00000506896 C19orf12Q9NSK7 152 aa16.36■□□□□ 0.21
SNX25-204ENST00000506896 NDUFB11Q9NX14 153 aa16.36■□□□□ 0.21
SNX25-204ENST00000506896 A0A0A6YYJ9 748 aa16.35■□□□□ 0.21
SNX25-204ENST00000506896 TRAV40A0A0B4J280 105 aa16.35■□□□□ 0.21
SNX25-204ENST00000506896 TMEM82A0PJX8 343 aa16.35■□□□□ 0.21
SNX25-204ENST00000506896 CDRT1O95170 752 aa16.35■□□□□ 0.21
SNX25-204ENST00000506896 OR2H2O95918 312 aa16.35■□□□□ 0.21
SNX25-204ENST00000506896 IL13RA2Q14627 380 aa16.35■□□□□ 0.21
SNX25-204ENST00000506896 NHLRC3Q5JS37 347 aa16.35■□□□□ 0.21
SNX25-204ENST00000506896 FAM27D1Q5T7N8 215 aa16.35■□□□□ 0.21
SNX25-204ENST00000506896 TMEM91Q6ZNR0 172 aa16.35■□□□□ 0.21
SNX25-204ENST00000506896 BPIFB2Q8N4F0 458 aa16.35■□□□□ 0.21
SNX25-204ENST00000506896 TBX15Q96SF7 602 aa16.35■□□□□ 0.21
SNX25-204ENST00000506896 MRPS28Q9Y2Q9 187 aaKnown RBP16.35■□□□□ 0.21
SNX25-204ENST00000506896 CCRL2O00421 344 aa16.34■□□□□ 0.21
SNX25-204ENST00000506896 MGST3O14880 152 aa16.34■□□□□ 0.21
SNX25-204ENST00000506896 DEGS1O15121 323 aa16.34■□□□□ 0.21
SNX25-204ENST00000506896 PSPNO60542 156 aa16.34■□□□□ 0.21
SNX25-204ENST00000506896 HTR3BO95264 441 aa16.34■□□□□ 0.21
SNX25-204ENST00000506896 ZNF44P15621 663 aa16.34■□□□□ 0.21
SNX25-204ENST00000506896 GP2P55259 537 aaKnown RBP16.34■□□□□ 0.21
SNX25-204ENST00000506896 FABP5Q01469 135 aa16.34■□□□□ 0.21
SNX25-204ENST00000506896 GRK1Q15835 563 aa16.34■□□□□ 0.21
SNX25-204ENST00000506896 SSX1Q16384 188 aa16.34■□□□□ 0.21
SNX25-204ENST00000506896 GLT8D1Q68CQ7 371 aa16.34■□□□□ 0.21
SNX25-204ENST00000506896 AWAT2Q6E213 333 aa16.34■□□□□ 0.21
SNX25-204ENST00000506896 LRRTM1Q86UE6 522 aa16.34■□□□□ 0.21
SNX25-204ENST00000506896 LYPD6Q86Y78 171 aa16.34■□□□□ 0.21
SNX25-204ENST00000506896 ZNF418Q8TF45 676 aaPredicted RBP16.34■□□□□ 0.21
SNX25-204ENST00000506896 MUL1Q969V5 352 aa16.34■□□□□ 0.21
SNX25-204ENST00000506896 NKX3-1Q99801 234 aaPredicted RBP16.34■□□□□ 0.21
SNX25-204ENST00000506896 MS4A7Q9GZW8 240 aaPredicted RBP16.34■□□□□ 0.21
SNX25-204ENST00000506896 OCEL1Q9H607 264 aa16.34■□□□□ 0.21
SNX25-204ENST00000506896 METTL8Q9H825 291 aaKnown RBP16.34■□□□□ 0.21
SNX25-204ENST00000506896 GHRLQ9UBU3 117 aa16.34■□□□□ 0.21
SNX25-204ENST00000506896 A0A0G2JK05 382 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 hCG_1809904A0A1W2PP81 198 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 A0A1W2PPE2 198 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 A0A1W2PR64 198 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 A0A1W2PRV1 198 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 FUOMA2VDF0 154 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 SIRPB1O00241 398 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 VENTXO95231 258 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 TNFAIP8O95379 198 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 IGHV4-38-2P0DP08 117 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 GTF2F2P13984 249 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 GALP22466 123 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 PSMB9P28065 219 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 ERP29P30040 261 aaKnown RBP16.33■□□□□ 0.2
SNX25-204ENST00000506896 EDDM3BP56851 147 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 MEF2CQ06413 473 aaPredicted RBP16.33■□□□□ 0.2
SNX25-204ENST00000506896 SCN1BQ07699 218 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 SLC22A6Q4U2R8 563 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 TMEM200BQ69YZ2 307 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 Q6P435 159 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 METAP1DQ6UB28 335 aaPredicted RBP16.33■□□□□ 0.2
SNX25-204ENST00000506896 GLIPR1L1Q6UWM5 242 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 C9orf139Q6ZV77 190 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 USP43Q70EL4 1123 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 VMO1Q7Z5L0 202 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 LINC00596Q86U02 117 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 OSR2Q8N2R0 312 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 OR4M1Q8NGD0 313 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 OR10K1Q8NGX5 313 aa16.33■□□□□ 0.2
SNX25-204ENST00000506896 MRPS24Q96EL2 167 aaKnown RBP16.33■□□□□ 0.2
SNX25-204ENST00000506896 NR1H4Q96RI1 486 aaPredicted RBP16.33■□□□□ 0.2
SNX25-204ENST00000506896 C19orf24Q9BVV8 132 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms