RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 EDDM3AQ14507 147 aa10.77□□□□□ -0.69
TCOF1-209ENST00000506630 ZNF146Q15072 292 aa10.77□□□□□ -0.69
TCOF1-209ENST00000506630 TREML4Q6UXN2 200 aa10.77□□□□□ -0.69
TCOF1-209ENST00000506630 RBMS3Q6XE24 437 aaKnown RBP10.77□□□□□ -0.69
TCOF1-209ENST00000506630 GDPD3Q7L5L3 318 aa10.77□□□□□ -0.69
TCOF1-209ENST00000506630 PRSS48Q7RTY5 328 aa10.77□□□□□ -0.69
TCOF1-209ENST00000506630 OR8H2Q8N162 312 aa10.77□□□□□ -0.69
TCOF1-209ENST00000506630 UFD1Q92890 307 aa10.77□□□□□ -0.69
TCOF1-209ENST00000506630 SNX22Q96L94 193 aa10.77□□□□□ -0.69
TCOF1-209ENST00000506630 DMRTB1Q96MA1 342 aa10.77□□□□□ -0.69
TCOF1-209ENST00000506630 DERL3Q96Q80 235 aa10.77□□□□□ -0.69
TCOF1-209ENST00000506630 TMED9Q9BVK6 235 aa10.77□□□□□ -0.69
TCOF1-209ENST00000506630 CHST6Q9GZX3 395 aa10.77□□□□□ -0.69
TCOF1-209ENST00000506630 ESM1Q9NQ30 184 aa10.77□□□□□ -0.69
TCOF1-209ENST00000506630 SOX21Q9Y651 276 aaPredicted RBP10.77□□□□□ -0.69
TCOF1-209ENST00000506630 TRAV8-7A0A075B6U6 113 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 TRBV5-7A0A0A0MS05 114 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 A0A0G2JK05 382 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 MDFIC2A0A1B0GVS7 189 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 A0A1W2PPH5 198 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 TMEM82A0PJX8 343 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 MAGEA13PA6NCF6 341 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 M0R1W7 72 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 ZNF737O75373 536 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 HKR1P10072 659 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 ZNF44P15621 663 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 MAPK3P27361 379 aaPredicted RBP10.76□□□□□ -0.69
TCOF1-209ENST00000506630 TGFBR2P37173 567 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 DLX1P56177 255 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 UBA52P62987 128 aaKnown RBP10.76□□□□□ -0.69
TCOF1-209ENST00000506630 SCN1BQ07699 218 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 KLRD1Q13241 179 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 ZNF273Q14593 569 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 RSU1Q15404 277 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 GRK1Q15835 563 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 C9orf139Q6ZV77 190 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 Q8N7P7 452 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 ZDHHC22Q8N966 263 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 PXT1Q8NFP0 134 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 OR10K1Q8NGX5 313 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 THRSPQ92748 146 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 ZNF48Q96MX3 618 aaPredicted RBP10.76□□□□□ -0.69
TCOF1-209ENST00000506630 NR1H4Q96RI1 486 aaPredicted RBP10.76□□□□□ -0.69
TCOF1-209ENST00000506630 S100A13Q99584 98 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 RHOFQ9HBH0 211 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 ING4Q9UNL4 249 aa10.76□□□□□ -0.69
TCOF1-209ENST00000506630 IGHV1-69DA0A0B4J2H0 117 aa10.75□□□□□ -0.69
TCOF1-209ENST00000506630 MEX3AA1L020 520 aaKnown RBP10.75□□□□□ -0.69
TCOF1-209ENST00000506630 SH2D1BO14796 132 aa10.75□□□□□ -0.69
TCOF1-209ENST00000506630 PSPNO60542 156 aa10.75□□□□□ -0.69
TCOF1-209ENST00000506630 GPX5O75715 221 aa10.75□□□□□ -0.69
TCOF1-209ENST00000506630 CDRT1O95170 752 aa10.75□□□□□ -0.69
TCOF1-209ENST00000506630 OR2H2O95918 312 aa10.75□□□□□ -0.69
TCOF1-209ENST00000506630 IGHV1-69P01742 117 aa10.75□□□□□ -0.69
TCOF1-209ENST00000506630 MAS1P04201 325 aa10.75□□□□□ -0.69
TCOF1-209ENST00000506630 MAP2K4P45985 399 aa10.75□□□□□ -0.69
TCOF1-209ENST00000506630 MTNR1BP49286 362 aa10.75□□□□□ -0.69
TCOF1-209ENST00000506630 BPIFB3P59826 476 aa10.75□□□□□ -0.69
TCOF1-209ENST00000506630 INSL4Q14641 139 aa10.75□□□□□ -0.69
TCOF1-209ENST00000506630 MIDNQ504T8 468 aa10.75□□□□□ -0.69
TCOF1-209ENST00000506630 LIPKQ5VXJ0 399 aa10.75□□□□□ -0.69
TCOF1-209ENST00000506630 C17orf107Q6ZR85 190 aa10.75□□□□□ -0.69
TCOF1-209ENST00000506630 JAGN1Q8N5M9 183 aa10.75□□□□□ -0.69
TCOF1-209ENST00000506630 MS4A15Q8N5U1 240 aa10.75□□□□□ -0.69
TCOF1-209ENST00000506630 OR5D13Q8NGL4 314 aa10.75□□□□□ -0.69
TCOF1-209ENST00000506630 PPP1R35Q8TAP8 253 aa10.75□□□□□ -0.69
TCOF1-209ENST00000506630 NOX4Q9NPH5 578 aa10.75□□□□□ -0.69
TCOF1-209ENST00000506630 FOXJ3Q9UPW0 622 aa10.75□□□□□ -0.69
TCOF1-209ENST00000506630 A0A1W2PRD5 423 aa10.74□□□□□ -0.69
TCOF1-209ENST00000506630 A0A1W2PRF3 423 aa10.74□□□□□ -0.69
TCOF1-209ENST00000506630 A0A1W2PRM7 423 aa10.74□□□□□ -0.69
TCOF1-209ENST00000506630 PIN1P1O15428 100 aa10.74□□□□□ -0.69
TCOF1-209ENST00000506630 HTR3BO95264 441 aa10.74□□□□□ -0.69
TCOF1-209ENST00000506630 CCL3L1P16619 93 aa10.74□□□□□ -0.69
TCOF1-209ENST00000506630 SERPINA2P20848 420 aa10.74□□□□□ -0.69
TCOF1-209ENST00000506630 PTGFRP43088 359 aa10.74□□□□□ -0.69
TCOF1-209ENST00000506630 OR3A1P47881 315 aa10.74□□□□□ -0.69
TCOF1-209ENST00000506630 BMXP51813 675 aa10.74□□□□□ -0.69
TCOF1-209ENST00000506630 GABARAPL2P60520 117 aa10.74□□□□□ -0.69
TCOF1-209ENST00000506630 GUCA2AQ02747 115 aa10.74□□□□□ -0.69
TCOF1-209ENST00000506630 BAMBIQ13145 260 aa10.74□□□□□ -0.69
TCOF1-209ENST00000506630 TBCEQ15813 527 aaPredicted RBP10.74□□□□□ -0.69
TCOF1-209ENST00000506630 DEFB112Q30KQ8 113 aa10.74□□□□□ -0.69
TCOF1-209ENST00000506630 ACSM3Q53FZ2 586 aa10.74□□□□□ -0.69
TCOF1-209ENST00000506630 TMEM200BQ69YZ2 307 aa10.74□□□□□ -0.69
TCOF1-209ENST00000506630 METAP1DQ6UB28 335 aaPredicted RBP10.74□□□□□ -0.69
TCOF1-209ENST00000506630 TPRX1Q8N7U7 411 aa10.74□□□□□ -0.69
TCOF1-209ENST00000506630 OR4S1Q8NGB4 309 aa10.74□□□□□ -0.69
TCOF1-209ENST00000506630 TBC1D15Q8TC07 691 aa10.74□□□□□ -0.69
TCOF1-209ENST00000506630 TAF15Q92804 592 aaKnown RBP eCLIP10.74□□□□□ -0.69
TCOF1-209ENST00000506630 DUX5Q96PT3 197 aa10.74□□□□□ -0.69
TCOF1-209ENST00000506630 METTL9Q9H1A3 318 aa10.74□□□□□ -0.69
TCOF1-209ENST00000506630 PPA2Q9H2U2 334 aa10.74□□□□□ -0.69
TCOF1-209ENST00000506630 METTL8Q9H825 291 aaKnown RBP10.74□□□□□ -0.69
TCOF1-209ENST00000506630 SEBOXQ9HB31 216 aaPredicted RBP10.74□□□□□ -0.69
TCOF1-209ENST00000506630 DNAJC9-AS1A6NH13 148 aa10.73□□□□□ -0.69
TCOF1-209ENST00000506630 RNASEK-C17orf49H0YIS7 233 aa10.73□□□□□ -0.69
TCOF1-209ENST00000506630 MGST3O14880 152 aa10.73□□□□□ -0.69
TCOF1-209ENST00000506630 DEGS1O15121 323 aa10.73□□□□□ -0.69
TCOF1-209ENST00000506630 DENRO43583 198 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms