RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 RBM22Q9NW64 420 aaKnown RBP eCLIP0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 PRO0628Q9UI54 55 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 NAGKQ9UJ70 344 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 SLC7A11Q9UPY5 501 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 KLF12Q9Y4X4 402 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 ORC6Q9Y5N6 252 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 HSPE1-MOB4S4R3N1 261 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 ATAD5Q96QE3 1844 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 MPDZO75970 2070 aa0.73□□□□□ -2.29
HMGB1P29-201ENST00000505659 PHLPP2Q6ZVD8 1323 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 CEP170Q5SW79 1584 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 C19orf71A6NCJ1 209 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 AKR7A2O43488 359 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 OPN1SWP03999 348 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 OR5AL1P0C617 328 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 PRKACAP17612 351 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 IVDP26440 423 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 ARR3P36575 388 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 PEX19P40855 299 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 BCAP31P51572 246 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 HCCSP53701 268 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 SLC35B1P78383 322 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 DOC2AQ14183 400 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 ATP6V1FQ16864 119 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 TTMPQ5BVD1 217 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 CLLU1OSQ5K130 101 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 IDNKQ5T6J7 187 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 LINC00523Q86TU6 105 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 CYP4Z2PQ8N1L4 340 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 SMIM8Q96KF7 97 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 RILPQ96NA2 401 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 TMED9Q9BVK6 235 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 FLVCR2Q9UPI3 526 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 INSIG2Q9Y5U4 225 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 MYO5BQ9ULV0 1848 aa0.72□□□□□ -2.29
HMGB1P29-201ENST00000505659 TTC41PQ6P2S7 1318 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 FAM240AA0A1B0GVK7 77 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 C17orf98A8MV24 154 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 SEC14L6B5MCN3 397 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 LY6LH3BQJ8 138 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 UPK2O00526 184 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 SLC37A4O43826 429 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 PLEKHA8P1O95397 391 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 ETHE1O95571 254 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 MBP02144 154 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 IMPA1P29218 277 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 MAGEA6P43360 314 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 MLF1P58340 268 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 SSX1Q16384 188 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 HIKESHIQ53FT3 197 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 CLEC12AQ5QGZ9 265 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 FAM27D1Q5T7N8 215 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 SYT6Q5T7P8 510 aaPredicted RBP0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 DUPD1Q68J44 220 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 EPGNQ6UW88 154 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 UGT2A3Q6UWM9 527 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 SCXQ7RTU7 201 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 ARHGAP18Q8N392 663 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 FBXO36Q8NEA4 188 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 MFSD8Q8NHS3 518 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 UBA3Q8TBC4 463 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 NT5CQ8TCD5 201 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 TCP10LQ8TDR4 215 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 MAL2Q969L2 176 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 COA1Q9GZY4 146 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 VCX3AQ9NNX9 186 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 SDHAF3Q9NRP4 125 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 RABL2AQ9UBK7 228 aaPredicted RBP0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 AP3M1Q9Y2T2 418 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 RHBDD3Q9Y3P4 386 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 ARHGAP32A7KAX9 2087 aa0.71□□□□□ -2.3
HMGB1P29-201ENST00000505659 A0A0J9YYE9 177 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 GOLGA6L7A0A1B0GV03 622 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 A0A1W2PPV4 95 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 ANKRD20A5PA0PJZ0 165 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 IGKV2-29A2NJV5 120 aaPredicted RBP0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 OR2AT4A6NND4 320 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 RNF113AO15541 343 aaKnown RBP0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 COX7A2P2O60397 106 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 ZNF189O75820 626 aaPredicted RBP0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 TRBC1P01850 177 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 HLA-AP01891 365 aaKnown RBP0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 SRMP19623 302 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 BLVRBP30043 206 aaPredicted RBP0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 P2RY2P41231 377 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 DSTNP60981 165 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 RPL31P62899 125 aaKnown RBP0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 BNIP2Q12982 314 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 ZNF404Q494X3 552 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 UBE2NLQ5JXB2 153 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 ZNF773Q6PK81 442 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 DPPA2Q7Z7J5 298 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 SETD3Q86TU7 594 aaPredicted RBP0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 LINC00596Q86U02 117 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 CYP4Z1Q86W10 505 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 NELFCDQ8IXH7 590 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 CA13Q8N1Q1 262 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 CCNYL1Q8N7R7 359 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 OR51L1Q8NGJ5 315 aa0.7□□□□□ -2.3
HMGB1P29-201ENST00000505659 OR51A7Q8NH64 312 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms