RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 PPA2Q9H2U2 334 aa11.62□□□□□ -0.55
HOXC9-202ENST00000504557 HMG20AQ9NP66 347 aa11.62□□□□□ -0.55
HOXC9-202ENST00000504557 PCDHGB5Q9Y5G0 923 aa11.62□□□□□ -0.55
HOXC9-202ENST00000504557 KDM4BO94953 1096 aa11.61□□□□□ -0.55
HOXC9-202ENST00000504557 ARG1P05089 322 aa11.61□□□□□ -0.55
HOXC9-202ENST00000504557 CD2P06729 351 aa11.61□□□□□ -0.55
HOXC9-202ENST00000504557 ZNF728P0DKX0 622 aa11.61□□□□□ -0.55
HOXC9-202ENST00000504557 SRSF4Q08170 494 aaKnown RBP11.61□□□□□ -0.55
HOXC9-202ENST00000504557 ACSM1Q08AH1 577 aa11.61□□□□□ -0.55
HOXC9-202ENST00000504557 SPIN3Q5JUX0 258 aa11.61□□□□□ -0.55
HOXC9-202ENST00000504557 DHRS7BQ6IAN0 325 aaPredicted RBP11.61□□□□□ -0.55
HOXC9-202ENST00000504557 LHFPL4Q7Z7J7 247 aa11.61□□□□□ -0.55
HOXC9-202ENST00000504557 STX19Q8N4C7 294 aa11.61□□□□□ -0.55
HOXC9-202ENST00000504557 C11orf42Q8N5U0 333 aa11.61□□□□□ -0.55
HOXC9-202ENST00000504557 OR4F5Q8NH21 305 aa11.61□□□□□ -0.55
HOXC9-202ENST00000504557 HAVCR2Q8TDQ0 301 aa11.61□□□□□ -0.55
HOXC9-202ENST00000504557 TNFAIP8L1Q8WVP5 186 aa11.61□□□□□ -0.55
HOXC9-202ENST00000504557 TMEM106AQ96A25 262 aa11.61□□□□□ -0.55
HOXC9-202ENST00000504557 ZNF714Q96N38 554 aa11.61□□□□□ -0.55
HOXC9-202ENST00000504557 SSX3Q99909 188 aa11.61□□□□□ -0.55
HOXC9-202ENST00000504557 ZNF747Q9BV97 191 aa11.61□□□□□ -0.55
HOXC9-202ENST00000504557 BEX1Q9HBH7 125 aa11.61□□□□□ -0.55
HOXC9-202ENST00000504557 BABAM2Q9NXR7 383 aa11.61□□□□□ -0.55
HOXC9-202ENST00000504557 A0A1W2PPK0 400 aa11.6□□□□□ -0.55
HOXC9-202ENST00000504557 hADV38S2A0JD32 116 aa11.6□□□□□ -0.55
HOXC9-202ENST00000504557 FAM172BPA6NC97 362 aa11.6□□□□□ -0.55
HOXC9-202ENST00000504557 CASQ2O14958 399 aaPredicted RBP11.6□□□□□ -0.55
HOXC9-202ENST00000504557 MT-ND2P03891 347 aa11.6□□□□□ -0.55
HOXC9-202ENST00000504557 OR3A1P47881 315 aa11.6□□□□□ -0.55
HOXC9-202ENST00000504557 DLX6P56179 175 aa11.6□□□□□ -0.55
HOXC9-202ENST00000504557 ZP1P60852 638 aa11.6□□□□□ -0.55
HOXC9-202ENST00000504557 PPP3R1P63098 170 aa11.6□□□□□ -0.55
HOXC9-202ENST00000504557 ATXN7L3Q14CW9 347 aaPredicted RBP11.6□□□□□ -0.55
HOXC9-202ENST00000504557 ZNF146Q15072 292 aa11.6□□□□□ -0.55
HOXC9-202ENST00000504557 CCDC58Q4VC31 144 aa11.6□□□□□ -0.55
HOXC9-202ENST00000504557 MIDNQ504T8 468 aa11.6□□□□□ -0.55
HOXC9-202ENST00000504557 CRIP3Q6Q6R5 217 aa11.6□□□□□ -0.55
HOXC9-202ENST00000504557 SHISA2Q6UWI4 295 aa11.6□□□□□ -0.55
HOXC9-202ENST00000504557 TCF23Q7RTU1 214 aa11.6□□□□□ -0.55
HOXC9-202ENST00000504557 PPP1R35Q8TAP8 253 aa11.6□□□□□ -0.55
HOXC9-202ENST00000504557 SLITRK2Q9H156 845 aa11.6□□□□□ -0.55
HOXC9-202ENST00000504557 DCLRE1BQ9H816 532 aa11.6□□□□□ -0.55
HOXC9-202ENST00000504557 VPREB3Q9UKI3 123 aa11.6□□□□□ -0.55
HOXC9-202ENST00000504557 ING4Q9UNL4 249 aa11.6□□□□□ -0.55
HOXC9-202ENST00000504557 EFCAB10A6NFE3 127 aa11.59□□□□□ -0.55
HOXC9-202ENST00000504557 C17orf98A8MV24 154 aa11.59□□□□□ -0.55
HOXC9-202ENST00000504557 GABRPO00591 440 aa11.59□□□□□ -0.55
HOXC9-202ENST00000504557 MGST3O14880 152 aa11.59□□□□□ -0.55
HOXC9-202ENST00000504557 MYL12BO14950 172 aa11.59□□□□□ -0.55
HOXC9-202ENST00000504557 DEGS1O15121 323 aa11.59□□□□□ -0.55
HOXC9-202ENST00000504557 HTR3BO95264 441 aa11.59□□□□□ -0.55
HOXC9-202ENST00000504557 IGHV1-8P0DP01 117 aa11.59□□□□□ -0.55
HOXC9-202ENST00000504557 OR3A4PP47883 348 aa11.59□□□□□ -0.55
HOXC9-202ENST00000504557 SLC34A1Q06495 639 aa11.59□□□□□ -0.55
HOXC9-202ENST00000504557 AESQ08117 197 aa11.59□□□□□ -0.55
HOXC9-202ENST00000504557 RSU1Q15404 277 aa11.59□□□□□ -0.55
HOXC9-202ENST00000504557 DDI2Q5TDH0 399 aa11.59□□□□□ -0.55
HOXC9-202ENST00000504557 ASPHD2Q6ICH7 369 aa11.59□□□□□ -0.55
HOXC9-202ENST00000504557 LAIR2Q6ISS4 152 aa11.59□□□□□ -0.55
HOXC9-202ENST00000504557 GDPGP1Q6ZNW5 385 aa11.59□□□□□ -0.55
HOXC9-202ENST00000504557 BEND2Q8NDZ0 799 aa11.59□□□□□ -0.55
HOXC9-202ENST00000504557 OR13D1Q8NGV5 346 aa11.59□□□□□ -0.55
HOXC9-202ENST00000504557 GHSRQ92847 366 aa11.59□□□□□ -0.55
HOXC9-202ENST00000504557 SMIM19Q96E16 107 aa11.59□□□□□ -0.55
HOXC9-202ENST00000504557 ZNF281Q9Y2X9 895 aa11.59□□□□□ -0.55
HOXC9-202ENST00000504557 HSPE1-MOB4S4R3N1 261 aa11.59□□□□□ -0.55
HOXC9-202ENST00000504557 OGG1O15527 345 aa11.58□□□□□ -0.56
HOXC9-202ENST00000504557 CDRT1O95170 752 aa11.58□□□□□ -0.56
HOXC9-202ENST00000504557 C21orf33P30042 268 aaPredicted RBP11.58□□□□□ -0.56
HOXC9-202ENST00000504557 GLIPR1P48060 266 aa11.58□□□□□ -0.56
HOXC9-202ENST00000504557 AQP4P55087 323 aa11.58□□□□□ -0.56
HOXC9-202ENST00000504557 P2RX3P56373 397 aa11.58□□□□□ -0.56
HOXC9-202ENST00000504557 MEF2CQ06413 473 aaPredicted RBP11.58□□□□□ -0.56
HOXC9-202ENST00000504557 FAM189A2Q15884 450 aa11.58□□□□□ -0.56
HOXC9-202ENST00000504557 LRRC75BQ2VPJ9 315 aa11.58□□□□□ -0.56
HOXC9-202ENST00000504557 KRBOX4Q5JUW0 171 aa11.58□□□□□ -0.56
HOXC9-202ENST00000504557 PRAMEF5Q5TYX0 476 aa11.58□□□□□ -0.56
HOXC9-202ENST00000504557 OLFML2AQ68BL7 652 aa11.58□□□□□ -0.56
HOXC9-202ENST00000504557 SAXO1Q8IYX7 474 aa11.58□□□□□ -0.56
HOXC9-202ENST00000504557 OR52N1Q8NH53 320 aa11.58□□□□□ -0.56
HOXC9-202ENST00000504557 CPNE2Q96FN4 548 aaPredicted RBP11.58□□□□□ -0.56
HOXC9-202ENST00000504557 PSORS1C1Q9UIG5 152 aa11.58□□□□□ -0.56
HOXC9-202ENST00000504557 LINC00312Q9Y6C7 94 aa11.58□□□□□ -0.56
HOXC9-202ENST00000504557 TRGV10A0A0A0MS01 117 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 A0A0G2JK05 382 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 CLPSL1A2RUU4 121 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 POM121CA8CG34 1229 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 PTGES3LE9PB15 166 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 H0YJX3 145 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 MMP23AO75900 390 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 CLPXO76031 633 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 NDUFA7O95182 113 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 SERPINA2P20848 420 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 ZNF93P35789 620 aaPredicted RBP11.57□□□□□ -0.56
HOXC9-202ENST00000504557 RAB13P51153 203 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 SSX2Q16385 188 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 PIGYQ3MUY2 71 aa11.57□□□□□ -0.56
HOXC9-202ENST00000504557 PAN3Q58A45 887 aaKnown RBP11.57□□□□□ -0.56
HOXC9-202ENST00000504557 DMKNQ6E0U4 476 aaPredicted RBP11.57□□□□□ -0.56
HOXC9-202ENST00000504557 Q6P435 159 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms