RNA–Protein interactions for RNA: ENST00000504443.6

COL6A4P2-202, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 2,753 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-202ENST00000504443 HSPA12AO43301 675 aa12.36□□□□□ -0.43
COL6A4P2-202ENST00000504443 SSSCA1O60232 199 aa12.36□□□□□ -0.43
COL6A4P2-202ENST00000504443 TMEM31Q5JXX7 168 aa12.36□□□□□ -0.43
COL6A4P2-202ENST00000504443 BRICD5Q6PL45 260 aa12.36□□□□□ -0.43
COL6A4P2-202ENST00000504443 ABHD12BQ7Z5M8 362 aaPredicted RBP12.36□□□□□ -0.43
COL6A4P2-202ENST00000504443 PARD6AQ9NPB6 346 aa12.36□□□□□ -0.43
COL6A4P2-202ENST00000504443 TCFL5Q9UL49 500 aa12.36□□□□□ -0.43
COL6A4P2-202ENST00000504443 SLC17A4Q9Y2C5 497 aa12.36□□□□□ -0.43
COL6A4P2-202ENST00000504443 CNTRLQ7Z7A1 2325 aa12.36□□□□□ -0.43
COL6A4P2-202ENST00000504443 ARHGEF17Q96PE2 2063 aaPredicted RBP12.36□□□□□ -0.43
COL6A4P2-202ENST00000504443 B4E171 279 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 PROB1E7EW31 1015 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 M0QZK8 103 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 HCRTR2O43614 444 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 GGCTO75223 188 aaKnown RBP12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 TRAPPC6AO75865 159 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 PFN1P07737 140 aaKnown RBP12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 DUSP1P28562 367 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 RNF151Q2KHN1 245 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 FBXW9Q5XUX1 488 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 Q6ZVH6 145 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 ZNF321PQ8N8H1 164 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 GPHA2Q96T91 129 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 OR10A5Q9H207 317 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 TNRC18O15417 2968 aaPredicted RBP12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 COL6A3P12111 3177 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 NKX2-6A6NCS4 301 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 CEACAM8P31997 349 aaPredicted RBP12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 GPR3P46089 330 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 ZNF266Q14584 549 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 IL13RA2Q14627 380 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 COA6Q5JTJ3 125 aaKnown RBP12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 SNIP1Q8TAD8 396 aaKnown RBP12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 PATE1Q8WXA2 126 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 DYRK2Q92630 601 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 NAA60Q9H7X0 242 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 ZNF319Q9P2F9 582 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 SHISA7A6NL88 538 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 ZNF850A8MQ14 1090 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 PHF1O43189 567 aaPredicted RBP12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 IL6RP08887 468 aaPredicted RBP12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 S100A7P31151 101 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 ZNF154Q13106 437 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 RSPO4Q2I0M5 234 aaPredicted RBP12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 SP5Q6BEB4 398 aaPredicted RBP12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 TOMM20LQ6UXN7 152 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 FAM57BQ71RH2 274 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 MAML2Q8IZL2 1156 aaPredicted RBP12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 OR5T1Q8NG75 326 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 MRGPRX4Q96LA9 322 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 CCNL2Q96S94 520 aaPredicted RBP12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 VSIRQ9H7M9 311 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 TMEM242Q9NWH2 141 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 P4HTMQ9NXG6 502 aa12.35□□□□□ -0.43
COL6A4P2-202ENST00000504443 CEBPZOSA8MTT3 80 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 GPR89AB7ZAQ6 455 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 AQP7O14520 342 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 MSTNO14793 375 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 PLRG1O43660 514 aaKnown RBP12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 GPR89BP0CG08 455 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 MLF1P58340 268 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 TLE4Q04727 773 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 CXorf66Q5JRM2 361 aaPredicted RBP12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 C1orf53Q5VUE5 145 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 KLHL24Q6TFL4 600 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 GBGT1Q8N5D6 347 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 C22orf15Q8WYQ4 148 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 SLAMF6Q96DU3 332 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 MS4A10Q96PG2 267 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 TXNIPQ9H3M7 391 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 SCDO00767 359 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 ZNF728P0DKX0 622 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 GALR1P47211 349 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 RAB7AP51149 207 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 MRPS34P82930 218 aaKnown RBP12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 ARMC6Q6NXE6 501 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 OR10S1Q8NGN2 331 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 NUDT16L1Q9BRJ7 211 aaKnown RBP12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 EMC6Q9BV81 110 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 ZBP1Q9H171 429 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 SERINC1Q9NRX5 453 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 MED29Q9NX70 200 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 DEC1Q9P2X7 70 aa12.34□□□□□ -0.43
COL6A4P2-202ENST00000504443 SLC31A1O15431 190 aa12.33□□□□□ -0.44
COL6A4P2-202ENST00000504443 TNFSF14O43557 240 aa12.33□□□□□ -0.44
COL6A4P2-202ENST00000504443 GALNSP34059 522 aa12.33□□□□□ -0.44
COL6A4P2-202ENST00000504443 GAB4Q2WGN9 574 aa12.33□□□□□ -0.44
COL6A4P2-202ENST00000504443 TMEM252Q8N6L7 170 aa12.33□□□□□ -0.44
COL6A4P2-202ENST00000504443 OR1N1Q8NGS0 311 aa12.33□□□□□ -0.44
COL6A4P2-202ENST00000504443 EXTL1Q92935 676 aa12.33□□□□□ -0.44
COL6A4P2-202ENST00000504443 RBMXL1Q96E39 390 aaKnown RBP12.33□□□□□ -0.44
COL6A4P2-202ENST00000504443 LIN37Q96GY3 246 aaPredicted RBP12.33□□□□□ -0.44
COL6A4P2-202ENST00000504443 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.33□□□□□ -0.44
COL6A4P2-202ENST00000504443 FBLN5Q9UBX5 448 aa12.33□□□□□ -0.44
COL6A4P2-202ENST00000504443 CLDN16Q9Y5I7 305 aa12.33□□□□□ -0.44
COL6A4P2-202ENST00000504443 MYO7BQ6PIF6 2116 aa12.33□□□□□ -0.44
COL6A4P2-202ENST00000504443 SHANK1Q9Y566 2161 aa12.33□□□□□ -0.44
COL6A4P2-202ENST00000504443 IGKV1-9A0A0C4DH69 117 aa12.33□□□□□ -0.44
COL6A4P2-202ENST00000504443 C5orf63A6NC05 138 aa12.33□□□□□ -0.44
COL6A4P2-202ENST00000504443 GUSBP08236 651 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms