RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 RABIFP47224 123 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 MTCP1P56278 107 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 RAB1AP62820 205 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 FUT7Q11130 342 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 FNDC7Q5VTL7 733 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 LYPD6Q86Y78 171 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 FAM185AQ8N0U4 392 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 RNF133Q8WVZ7 376 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 CPNE4Q96A23 557 aaPredicted RBP6.65□□□□□ -1.34
NEDD9-208ENST00000504387 TP53RKQ96S44 253 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 VSIRQ9H7M9 311 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 PPIAL4AQ9Y536 164 aa6.65□□□□□ -1.34
NEDD9-208ENST00000504387 KIR2DS5A0A0G2JLQ3 304 aa6.65□□□□□ -1.35
NEDD9-208ENST00000504387 A0A0G2JNG1 304 aa6.65□□□□□ -1.35
NEDD9-208ENST00000504387 KIR2DS3K7RE56 304 aa6.65□□□□□ -1.35
NEDD9-208ENST00000504387 AMBPP02760 352 aa6.65□□□□□ -1.35
NEDD9-208ENST00000504387 POU2F2P09086 479 aa6.65□□□□□ -1.35
NEDD9-208ENST00000504387 TNFRSF4P43489 277 aa6.65□□□□□ -1.35
NEDD9-208ENST00000504387 POLR2HP52434 150 aaKnown RBP6.65□□□□□ -1.35
NEDD9-208ENST00000504387 SPCS3P61009 180 aa6.65□□□□□ -1.35
NEDD9-208ENST00000504387 COL10A1Q03692 680 aa6.65□□□□□ -1.35
NEDD9-208ENST00000504387 ICAM4Q14773 271 aa6.65□□□□□ -1.35
NEDD9-208ENST00000504387 KIR2DS5Q14953 304 aa6.65□□□□□ -1.35
NEDD9-208ENST00000504387 LHFPL1Q86WI0 220 aa6.65□□□□□ -1.35
NEDD9-208ENST00000504387 UEVLDQ8IX04 471 aa6.65□□□□□ -1.35
NEDD9-208ENST00000504387 C9orf40Q8IXQ3 194 aa6.65□□□□□ -1.35
NEDD9-208ENST00000504387 OR2C3Q8N628 320 aa6.65□□□□□ -1.35
NEDD9-208ENST00000504387 OR14L1PQ8NHC6 308 aa6.65□□□□□ -1.35
NEDD9-208ENST00000504387 SLC39A7Q92504 469 aa6.65□□□□□ -1.35
NEDD9-208ENST00000504387 LRRC61Q9BV99 259 aa6.65□□□□□ -1.35
NEDD9-208ENST00000504387 ELOVL1Q9BW60 279 aa6.65□□□□□ -1.35
NEDD9-208ENST00000504387 PLEKHA2Q9HB19 425 aa6.65□□□□□ -1.35
NEDD9-208ENST00000504387 SLC2A9Q9NRM0 540 aa6.65□□□□□ -1.35
NEDD9-208ENST00000504387 P4HTMQ9NXG6 502 aa6.65□□□□□ -1.35
NEDD9-208ENST00000504387 LHFPL6Q9Y693 200 aa6.65□□□□□ -1.35
NEDD9-208ENST00000504387 POMT1Q9Y6A1 747 aa6.65□□□□□ -1.35
NEDD9-208ENST00000504387 WDFY4Q6ZS81 3184 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 TLCD2A6NGC4 264 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 DXOO77932 396 aaKnown RBP6.64□□□□□ -1.35
NEDD9-208ENST00000504387 CLPSP04118 112 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 GAPDHP04406 335 aaKnown RBP6.64□□□□□ -1.35
NEDD9-208ENST00000504387 HNF1AP20823 631 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 PAX6P26367 422 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 TFPI2P48307 235 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 EFNA3P52797 238 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 RNF4P78317 190 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 GABREP78334 506 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 HLA-DRB3P79483 266 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 HYAL1Q12794 435 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.64□□□□□ -1.35
NEDD9-208ENST00000504387 RTL6Q6ICC9 239 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 SPSB3Q6PJ21 355 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 C1orf87Q8N0U7 546 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 TSTD1Q8NFU3 115 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 HIST1H2AAQ96QV6 131 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 SNHG12Q9BXW3 62 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 HEATR1Q9H583 2144 aaKnown RBP6.64□□□□□ -1.35
NEDD9-208ENST00000504387 ZNF160Q9HCG1 818 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 ZNF107Q9UII5 783 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-208ENST00000504387 FUT9Q9Y231 359 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 ZNF814B7Z6K7 855 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 K7N7A8 449 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 ADAM20O43506 726 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 ISG15P05161 165 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 NPSP0C0P6 89 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 IAPPP10997 89 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 LYL1P12980 280 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 EDN3P14138 238 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 ZNF16P17020 682 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-208ENST00000504387 EGR1P18146 543 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 TBPP20226 339 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 BLKP51451 505 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 FOXF1Q12946 379 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 PRAMEF20Q5VT98 475 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 DNM1P34Q6PK57 102 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 H1FNTQ75WM6 255 aaPredicted RBP6.64□□□□□ -1.35
NEDD9-208ENST00000504387 TMPRSS7Q7RTY8 843 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 PRR18Q8N4B5 295 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 SLC38A9Q8NBW4 561 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 OR4X1Q8NH49 305 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 ASB10Q8WXI3 467 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 TMEM68Q96MH6 324 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 RBM24Q9BX46 236 aaKnown RBP6.64□□□□□ -1.35
NEDD9-208ENST00000504387 MRPL37Q9BZE1 423 aaKnown RBP6.64□□□□□ -1.35
NEDD9-208ENST00000504387 GLRX2Q9NS18 164 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 MMACHCQ9Y4U1 282 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 ASPMQ8IZT6 3477 aa6.64□□□□□ -1.35
NEDD9-208ENST00000504387 A6NCN8 305 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 CRYM-AS1A6NIL9 109 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 A8MWP6 167 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 C9J4A7 227 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 FBLP22087 321 aaKnown RBP6.63□□□□□ -1.35
NEDD9-208ENST00000504387 NKX2-1P43699 371 aaPredicted RBP6.63□□□□□ -1.35
NEDD9-208ENST00000504387 TNFRSF9Q07011 255 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 MYBPHQ13203 477 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 C1orf53Q5VUE5 145 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 ZNF695Q8IW36 515 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 OR1K1Q8NGR3 316 aa6.63□□□□□ -1.35
NEDD9-208ENST00000504387 GPBAR1Q8TDU6 330 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms