RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 PPIFP30405 207 aaKnown RBP9.53□□□□□ -0.88
LSM6-204ENST00000504181 RAB9AP51151 201 aa9.53□□□□□ -0.88
LSM6-204ENST00000504181 EBI3Q14213 229 aa9.53□□□□□ -0.88
LSM6-204ENST00000504181 IFI44LQ53G44 452 aa9.53□□□□□ -0.88
LSM6-204ENST00000504181 SLX4IPQ5VYV7 408 aa9.53□□□□□ -0.88
LSM6-204ENST00000504181 KRT74Q7RTS7 529 aa9.53□□□□□ -0.88
LSM6-204ENST00000504181 CYP4Z1Q86W10 505 aa9.53□□□□□ -0.88
LSM6-204ENST00000504181 COMMD2Q86X83 199 aa9.53□□□□□ -0.88
LSM6-204ENST00000504181 ANGPTL5Q86XS5 388 aa9.53□□□□□ -0.88
LSM6-204ENST00000504181 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.53□□□□□ -0.88
LSM6-204ENST00000504181 Q8N6K4 173 aa9.53□□□□□ -0.88
LSM6-204ENST00000504181 OR9G1Q8NH87 305 aa9.53□□□□□ -0.88
LSM6-204ENST00000504181 LEAP2Q969E1 77 aa9.53□□□□□ -0.88
LSM6-204ENST00000504181 GPR173Q9NS66 373 aa9.53□□□□□ -0.88
LSM6-204ENST00000504181 TAS2R3Q9NYW6 316 aa9.53□□□□□ -0.88
LSM6-204ENST00000504181 IL36RNQ9UBH0 155 aa9.53□□□□□ -0.88
LSM6-204ENST00000504181 PIGLQ9Y2B2 252 aa9.53□□□□□ -0.88
LSM6-204ENST00000504181 MRPS28Q9Y2Q9 187 aaKnown RBP9.53□□□□□ -0.88
LSM6-204ENST00000504181 U3KQV3 271 aa9.53□□□□□ -0.88
LSM6-204ENST00000504181 DMBT1Q9UGM3 2413 aaPredicted RBP9.53□□□□□ -0.88
LSM6-204ENST00000504181 A0A087X0M5 115 aa9.52□□□□□ -0.89
LSM6-204ENST00000504181 A0A0J9YWU9 116 aa9.52□□□□□ -0.89
LSM6-204ENST00000504181 A0A1B0GX30 115 aa9.52□□□□□ -0.89
LSM6-204ENST00000504181 PQLC2LA1A4F0 135 aa9.52□□□□□ -0.89
LSM6-204ENST00000504181 H0Y980 276 aa9.52□□□□□ -0.89
LSM6-204ENST00000504181 J3QR06 171 aa9.52□□□□□ -0.89
LSM6-204ENST00000504181 RGS11O94810 467 aa9.52□□□□□ -0.89
LSM6-204ENST00000504181 IGLV1-40P01703 118 aa9.52□□□□□ -0.89
LSM6-204ENST00000504181 LGALS1P09382 135 aaKnown RBP9.52□□□□□ -0.89
LSM6-204ENST00000504181 CLUP10909 449 aa9.52□□□□□ -0.89
LSM6-204ENST00000504181 MPZP25189 248 aa9.52□□□□□ -0.89
LSM6-204ENST00000504181 ERP29P30040 261 aaKnown RBP9.52□□□□□ -0.89
LSM6-204ENST00000504181 SOX6P35712 828 aa9.52□□□□□ -0.89
LSM6-204ENST00000504181 PTGFRP43088 359 aa9.52□□□□□ -0.89
LSM6-204ENST00000504181 OR3A1P47881 315 aa9.52□□□□□ -0.89
LSM6-204ENST00000504181 MADCAM1Q13477 382 aa9.52□□□□□ -0.89
LSM6-204ENST00000504181 LINC01559Q495D7 138 aa9.52□□□□□ -0.89
LSM6-204ENST00000504181 MOB3BQ86TA1 216 aa9.52□□□□□ -0.89
LSM6-204ENST00000504181 ERI1Q8IV48 349 aaKnown RBP9.52□□□□□ -0.89
LSM6-204ENST00000504181 RNF148Q8N7C7 305 aa9.52□□□□□ -0.89
LSM6-204ENST00000504181 S1PR3Q99500 378 aa9.52□□□□□ -0.89
LSM6-204ENST00000504181 CCDC28BQ9BUN5 200 aa9.52□□□□□ -0.89
LSM6-204ENST00000504181 GLS2Q9UI32 602 aa9.52□□□□□ -0.89
LSM6-204ENST00000504181 UBR4Q5T4S7 5183 aa9.51□□□□□ -0.89
LSM6-204ENST00000504181 A0A1W2PRQ8 180 aa9.51□□□□□ -0.89
LSM6-204ENST00000504181 GSC2O15499 205 aa9.51□□□□□ -0.89
LSM6-204ENST00000504181 DUSP1P28562 367 aa9.51□□□□□ -0.89
LSM6-204ENST00000504181 GLIPR1P48060 266 aa9.51□□□□□ -0.89
LSM6-204ENST00000504181 RIPPLY1Q0D2K3 151 aa9.51□□□□□ -0.89
LSM6-204ENST00000504181 CYLC2Q14093 348 aaPredicted RBP9.51□□□□□ -0.89
LSM6-204ENST00000504181 DGCR6Q14129 220 aa9.51□□□□□ -0.89
LSM6-204ENST00000504181 FKBP9P1Q75LS8 142 aa9.51□□□□□ -0.89
LSM6-204ENST00000504181 SLC37A3Q8NCC5 494 aa9.51□□□□□ -0.89
LSM6-204ENST00000504181 OR2T10Q8NGZ9 312 aa9.51□□□□□ -0.89
LSM6-204ENST00000504181 OR52J3Q8NH60 311 aa9.51□□□□□ -0.89
LSM6-204ENST00000504181 CORO2AQ92828 525 aa9.51□□□□□ -0.89
LSM6-204ENST00000504181 SLAMF9Q96A28 289 aa9.51□□□□□ -0.89
LSM6-204ENST00000504181 HSH2DQ96JZ2 352 aa9.51□□□□□ -0.89
LSM6-204ENST00000504181 CEP19Q96LK0 163 aa9.51□□□□□ -0.89
LSM6-204ENST00000504181 PLSCR3Q9NRY6 295 aa9.51□□□□□ -0.89
LSM6-204ENST00000504181 DCAF13Q9NV06 445 aaKnown RBP9.51□□□□□ -0.89
LSM6-204ENST00000504181 MTCH1Q9NZJ7 389 aa9.51□□□□□ -0.89
LSM6-204ENST00000504181 ENPP4Q9Y6X5 453 aa9.51□□□□□ -0.89
LSM6-204ENST00000504181 IGHV1-3A0A0C4DH29 117 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 IZUMO1RA6ND01 250 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 FAM220BPB1ANY3 271 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 IGHV3-11P01762 117 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 SPI1P17947 270 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 FASP25445 335 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 REG1BP48304 166 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 GNG10P50151 68 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 SNU13P55769 128 aaKnown RBP9.5□□□□□ -0.89
LSM6-204ENST00000504181 CD81P60033 236 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 PSMA6P60900 246 aaKnown RBP9.5□□□□□ -0.89
LSM6-204ENST00000504181 ZNF91Q05481 1191 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 AESQ08117 197 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 IL24Q13007 206 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 LCN1P1Q5VSP4 162 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 TRPM8Q7Z2W7 1104 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 ZNF575Q86XF7 245 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 IZUMO1Q8IYV9 350 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 DEFB125Q8N687 156 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 MAPKAPK5-AS1Q8N8E1 139 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 CASTOR1Q8WTX7 329 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 RGP1Q92546 391 aaPredicted RBP9.5□□□□□ -0.89
LSM6-204ENST00000504181 EMG1Q92979 244 aaKnown RBP9.5□□□□□ -0.89
LSM6-204ENST00000504181 TMEM106AQ96A25 262 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 KIRREL1Q96J84 757 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 LRGUKQ96M69 825 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 INTS14Q96SY0 518 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 MNTQ99583 582 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 SH3GL1Q99961 368 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 OVOL2Q9BRP0 275 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 TMEM109Q9BVC6 243 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 WFDC10AQ9H1F0 79 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 ING3Q9NXR8 418 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 OR6C3Q9NZP0 311 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 ZNF107Q9UII5 783 aaPredicted RBP9.5□□□□□ -0.89
LSM6-204ENST00000504181 ENPP5Q9UJA9 477 aa9.5□□□□□ -0.89
LSM6-204ENST00000504181 ZNF580Q9UK33 172 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms