RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 RSPO1Q2MKA7 263 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 ATP6AP1LQ52LC2 224 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 TCEAL5Q5H9L2 206 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 SPIN3Q5JUX0 258 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 CLEC12AQ5QGZ9 265 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 KCTD16Q68DU8 428 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 Q6P435 159 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 ARL9Q6T311 187 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 FBXW12Q6X9E4 464 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 SPNS3Q6ZMD2 512 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 DGAT2L6Q6ZPD8 337 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 CCDC121Q6ZUS5 278 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 FAM183BPQ6ZVS7 135 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 FAM231DQ6ZW35 169 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 NT5DC3Q86UY8 548 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 RIMKLAQ8IXN7 391 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 TMEM183AQ8IXX5 376 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 ZFP82Q8N141 532 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 RIBC1Q8N443 379 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 CCNYL1Q8N7R7 359 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 GATD1Q8NB37 220 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 OR4P4Q8NGL7 312 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 OR13G1Q8NGZ3 307 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 ERMNQ8TAM6 284 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 ZNF420Q8TAQ5 688 aaPredicted RBP1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 ACTRT1Q8TDG2 376 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 RXFP4Q8TDU9 374 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 C22orf15Q8WYQ4 148 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 TCEAL3Q969E4 200 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 FAM104AQ969W3 186 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 LRRC58Q96CX6 371 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 PRAP1Q96NZ9 151 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 EBNA1BP2Q99848 306 aaKnown RBP1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 NUDT9Q9BW91 350 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 SFXN3Q9BWM7 321 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 BCL2L14Q9BZR8 327 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 SPNS1Q9H2V7 528 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 TPK1Q9H3S4 243 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 TMEM100Q9NV29 134 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 OPN4Q9UHM6 478 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 F11RQ9Y624 299 aaKnown RBP1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 V9GYQ6 96 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 ARHGAP21Q5T5U3 1957 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 NFASCO94856 1347 aa1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 NUP153P49790 1475 aaKnown RBP1.55□□□□□ -2.16
HMGB1P35-201ENST00000503360 IGLV3-16A0A075B6K0 115 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 SMIM26A0A096LP01 95 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 TRAV19A0A0A6YYK7 116 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 IGHV3-74A0A0B4J1X5 117 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 METTL15A6NJ78 407 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 DNASE2O00115 360 aaPredicted RBP1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 CD5LO43866 347 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 CNMDO75829 334 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 GATBO75879 557 aaKnown RBP1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 IGKV1D-16P01601 117 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 IGLV2-23P01705 113 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 TRBV12-3P01733 135 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 CD74P04233 296 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 RPSAP08865 295 aaKnown RBP1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 OR4E1P0C645 316 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 HIST1H1EP10412 219 aaKnown RBP1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 MYL12AP19105 171 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 TCN2P20062 427 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 RPS12P25398 132 aaKnown RBP1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 MAGEA12P43365 314 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 KIR3DL2P43630 455 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 GNG10P50151 68 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 PPOXP50336 477 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 CDKN2DP55273 166 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 CYP24A1Q07973 514 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 PPIDQ08752 370 aaKnown RBP1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 ADIGQ0VDE8 80 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 RBMY1FQ15415 496 aaKnown RBP1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 HIST3H3Q16695 136 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 GUK1Q16774 197 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 LRRC26Q2I0M4 334 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 C6orf99Q4VX62 202 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 ORMDL2Q53FV1 153 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 SMUG1Q53HV7 270 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 TMEM255AQ5JRV8 349 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 FAM162BQ5T6X4 162 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 HES5Q5TA89 166 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 TSPO2Q5TGU0 170 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 TMEM236Q5W0B7 351 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 FBXW9Q5XUX1 488 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 PLET1Q6UQ28 207 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 NIT1Q86X76 327 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 CALHM1Q8IU99 346 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 SLC26A10Q8NG04 563 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 OR1M1Q8NGA1 313 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 OR10G4Q8NGN3 311 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 OR4C13Q8NGP0 309 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 DTD1Q8TEA8 209 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 CASTOR1Q8WTX7 329 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 ABHD3Q8WU67 409 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 CYGBQ8WWM9 190 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 AP3S1Q92572 193 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 TMEM159Q96B96 161 aa1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 DGCR14Q96DF8 476 aaKnown RBP1.54□□□□□ -2.16
HMGB1P35-201ENST00000503360 IMP4Q96G21 291 aaKnown RBP1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms