RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 TMEM17Q86X19 198 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 ARRDC1Q8N5I2 433 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 LRRC29Q8WV35 223 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 CREB3L1Q96BA8 519 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 PRRT1Q99946 306 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 SLC25A21Q9BQT8 299 aaPredicted RBP6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 FAAP24Q9BTP7 215 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 CACNG6Q9BXT2 260 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 SAP30LQ9HAJ7 183 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 ZNF286AQ9HBT8 521 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 CBLN4Q9NTU7 201 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 UFSP2Q9NUQ7 469 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 MCUBQ9NWR8 336 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 SLC2A8Q9NY64 477 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 RNF7Q9UBF6 113 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 DNAJB11Q9UBS4 358 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 USP24Q9UPU5 2620 aa6.87□□□□□ -1.31
TOPBP1-202ENST00000503338 ANKHD1Q8IWZ3 2542 aaKnown RBP6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 PLCE1Q9P212 2302 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 KIR2DS1A0A191URI9 304 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 F8VVB4 439 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 F8VWA3 439 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 HS3ST1O14792 307 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 SIAH2O43255 324 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 SSX5O60225 188 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 C1QL1O75973 258 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 OR2H2O95918 312 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 HAND1O96004 215 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 DHFRP00374 187 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 LHBP01229 141 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 CD3DP04234 171 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 PRB1P04280 392 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 TCRBP04435 133 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 FCGR3AP08637 254 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 MUC1P15941 1255 aaPredicted RBP6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 AMY2BP19961 511 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 GIFP27352 417 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 ECI1P42126 302 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 KIR2DS4P43632 304 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 OR3A3P47888 321 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 SNU13P55769 128 aaKnown RBP6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 BTG1P62324 171 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 SNTB1Q13884 538 aaKnown RBP6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 KIR2DS1Q14954 304 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 RBMS2Q15434 407 aaKnown RBP6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 MPPED2Q15777 294 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 GRK1Q15835 563 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 KCNJ8Q15842 424 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 SWI5Q1ZZU3 235 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 MICBQ29980 383 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 PLA1AQ53H76 456 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 PAN3Q58A45 887 aaKnown RBP6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 Q6P435 159 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 ZNF782Q6ZMW2 699 aaPredicted RBP6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 BTN2A1Q7KYR7 527 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 MOB1BQ7L9L4 216 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 MOGAT3Q86VF5 341 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 SUMF2Q8NBJ7 301 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 BEST4Q8NFU0 473 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 OR4C16Q8NGL9 310 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 OR5H2Q8NGV7 314 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 OR4K15Q8NH41 348 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 OR56B4Q8NH76 319 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 NEK7Q8TDX7 302 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 ZNF488Q96MN9 340 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 SCGB3A2Q96PL1 93 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 SPOCK3Q9BQ16 436 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 SULT4A1Q9BR01 284 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 MARVELD1Q9BSK0 173 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 ST6GALNAC5Q9BVH7 336 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 DPCDQ9BVM2 203 aaPredicted RBP6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 CHMP1AQ9HD42 196 aaPredicted RBP6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 GCM1Q9NP62 436 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 ZNF701Q9NV72 531 aaPredicted RBP6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 ETAA1Q9NY74 926 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 NLKQ9UBE8 527 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 AK3Q9UIJ7 227 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 PPP1R3CQ9UQK1 317 aa6.86□□□□□ -1.31
TOPBP1-202ENST00000503338 ZZEF1O43149 2961 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 HCFC1P51610 2035 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 TRAV24A0A0B4J272 114 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 UBE2QL1A1L167 161 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 FUOMA2VDF0 154 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 MEIS3P1A6NDR6 274 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 A6NNC1 897 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 GPR37O15354 613 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 PRAF2O60831 178 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 NDUFB6O95139 128 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 FSTL3O95633 263 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 PLAUP00749 431 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 MT-ND4P03905 459 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 CSN2P05814 226 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 FCER2P06734 321 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 CTXN2P0C2S0 81 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 HLA-DMAP28067 261 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 BTCP35070 178 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 HRH1P35367 487 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 ARPC4P59998 168 aa6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 MRPS11P82912 194 aaKnown RBP6.85□□□□□ -1.31
TOPBP1-202ENST00000503338 PAX5Q02548 391 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms