RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 FRYQ5TBA9 3013 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 DOCK7Q96N67 2140 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 A0A1W2PNU3 283 aaPredicted RBP8.49□□□□□ -1.05
CLIP1-204ENST00000501271 DIRAS3O95661 229 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 HLA-HP01893 362 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 GAPDHP04406 335 aaKnown RBP8.49□□□□□ -1.05
CLIP1-204ENST00000501271 FUT3P21217 361 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 AADACP22760 399 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 NOVA1P51513 510 aaKnown RBP8.49□□□□□ -1.05
CLIP1-204ENST00000501271 NRN1LQ496H8 165 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 EIF5AL1Q6IS14 154 aaKnown RBP8.49□□□□□ -1.05
CLIP1-204ENST00000501271 LIAT1Q6ZQX7 453 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 C5orf24Q7Z6I8 188 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 CBLN2Q8IUK8 224 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 TUSC5Q8IXB3 177 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 LRTM2Q8N967 370 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 OR52M1Q8NGK5 317 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 GLYATL2Q8WU03 294 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 HPSE2Q8WWQ2 592 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 TAAR9Q96RI9 348 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 FAM173AQ9BQD7 235 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 NRIP2Q9BQI9 281 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 PAPOLGQ9BWT3 736 aaKnown RBP8.49□□□□□ -1.05
CLIP1-204ENST00000501271 SUCNR1Q9BXA5 334 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 PRELID1Q9Y255 219 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 FAM166BA8MTA8 275 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 H7C1Q1 480 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 JMJD7P0C870 316 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 BCL3P20749 454 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 CAV2P51636 162 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 IGSF11Q5DX21 431 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 TMEM211Q6ICI0 200 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 DBX2Q6ZNG2 339 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 HS3ST6Q96QI5 342 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 ZPBPQ9BS86 351 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 LINC00470Q9BZP3 86 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 CALHM2Q9HA72 323 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 ZDHHC8Q9ULC8 765 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 LHX6Q9UPM6 363 aa8.49□□□□□ -1.05
CLIP1-204ENST00000501271 PQLC2LA1A4F0 135 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 AGPAT2O15120 278 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 PHF1O43189 567 aaPredicted RBP8.48□□□□□ -1.05
CLIP1-204ENST00000501271 JTBO76095 146 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 PPYP01298 95 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 GLP1RP43220 463 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 MAGEA5P43359 124 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 NPBWR1P48145 328 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 HERV-K104P61576 105 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 PRDX4Q13162 271 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 BTNL8Q6UX41 500 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 OR5T2Q8NGG2 359 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 SLAMF9Q96A28 289 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 TP53RKQ96S44 253 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 RSRP1Q9BUV0 290 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 DDA1Q9BW61 102 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 SEC11CQ9BY50 192 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 PRRG4Q9BZD6 226 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 STRADBQ9C0K7 418 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 PLEKHA2Q9HB19 425 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 PCDHB16Q9NRJ7 776 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 RCC2Q9P258 522 aaKnown RBP8.48□□□□□ -1.05
CLIP1-204ENST00000501271 IL36RNQ9UBH0 155 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 ATPIF1Q9UII2 106 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 ESPL1Q14674 2120 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 GPR179Q6PRD1 2367 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 C5orf49A4QMS7 147 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 E5RGE8 158 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 MPLP40238 635 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 HAAOP46952 286 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 GPM6AP51674 278 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 UCP3P55916 312 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 Q6ZRG5 221 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 UBAC2Q8NBM4 344 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 EXTL1Q92935 676 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 AIFM2Q9BRQ8 373 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 TTTY12Q9BZ98 90 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 PARP12Q9H0J9 701 aaKnown RBP8.48□□□□□ -1.05
CLIP1-204ENST00000501271 WFDC1Q9HC57 220 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 NSG2Q9Y328 171 aa8.48□□□□□ -1.05
CLIP1-204ENST00000501271 C9JQL5 133 aa8.47□□□□□ -1.05
CLIP1-204ENST00000501271 RPL36A-HNRNPH2H7BZ11 118 aa8.47□□□□□ -1.05
CLIP1-204ENST00000501271 LINC01387J3KSC0 135 aa8.47□□□□□ -1.05
CLIP1-204ENST00000501271 H2AFB1P0C5Y9 115 aa8.47□□□□□ -1.05
CLIP1-204ENST00000501271 OR1C1Q15619 314 aa8.47□□□□□ -1.05
CLIP1-204ENST00000501271 HFEQ30201 348 aa8.47□□□□□ -1.05
CLIP1-204ENST00000501271 ABHD17BQ5VST6 288 aa8.47□□□□□ -1.05
CLIP1-204ENST00000501271 HAGHLQ6PII5 290 aaPredicted RBP8.47□□□□□ -1.05
CLIP1-204ENST00000501271 LGI3Q8N145 548 aa8.47□□□□□ -1.05
CLIP1-204ENST00000501271 SLC35G3Q8N808 338 aa8.47□□□□□ -1.05
CLIP1-204ENST00000501271 Q8NFD4 153 aa8.47□□□□□ -1.05
CLIP1-204ENST00000501271 ARRDC1-AS1Q9H2J1 176 aa8.47□□□□□ -1.05
CLIP1-204ENST00000501271 PARP11Q9NR21 331 aa8.47□□□□□ -1.05
CLIP1-204ENST00000501271 PLA2G3Q9NZ20 509 aa8.47□□□□□ -1.05
CLIP1-204ENST00000501271 B4GALT7Q9UBV7 327 aa8.47□□□□□ -1.05
CLIP1-204ENST00000501271 NCOR1O75376 2440 aa8.47□□□□□ -1.05
CLIP1-204ENST00000501271 TSPAN9O75954 239 aa8.46□□□□□ -1.05
CLIP1-204ENST00000501271 SNAPINO95295 136 aa8.46□□□□□ -1.05
CLIP1-204ENST00000501271 NGFP01138 241 aa8.46□□□□□ -1.05
CLIP1-204ENST00000501271 SFTA3P0C7M3 94 aa8.46□□□□□ -1.05
CLIP1-204ENST00000501271 OR8U9P0C7N5 309 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms