RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 AWAT2Q6E213 333 aa13.82□□□□□ -0.2
PRKCB-210ENST00000498739 C17orf107Q6ZR85 190 aa13.82□□□□□ -0.2
PRKCB-210ENST00000498739 GDPD3Q7L5L3 318 aa13.82□□□□□ -0.2
PRKCB-210ENST00000498739 LRRTM1Q86UE6 522 aa13.82□□□□□ -0.2
PRKCB-210ENST00000498739 CDH26Q8IXH8 852 aa13.82□□□□□ -0.2
PRKCB-210ENST00000498739 CMTM4Q8IZR5 234 aa13.82□□□□□ -0.2
PRKCB-210ENST00000498739 OR8H2Q8N162 312 aa13.82□□□□□ -0.2
PRKCB-210ENST00000498739 PHYHIPQ92561 330 aa13.82□□□□□ -0.2
PRKCB-210ENST00000498739 TBX15Q96SF7 602 aa13.82□□□□□ -0.2
PRKCB-210ENST00000498739 SIRPDQ9H106 197 aa13.82□□□□□ -0.2
PRKCB-210ENST00000498739 C19orf12Q9NSK7 152 aa13.82□□□□□ -0.2
PRKCB-210ENST00000498739 NDUFB11Q9NX14 153 aa13.82□□□□□ -0.2
PRKCB-210ENST00000498739 IL36GQ9NZH8 169 aa13.82□□□□□ -0.2
PRKCB-210ENST00000498739 MRPS28Q9Y2Q9 187 aaKnown RBP13.82□□□□□ -0.2
PRKCB-210ENST00000498739 KPTNQ9Y664 436 aa13.82□□□□□ -0.2
PRKCB-210ENST00000498739 SONP18583 2426 aaKnown RBP13.82□□□□□ -0.2
PRKCB-210ENST00000498739 PSPNO60542 156 aa13.81□□□□□ -0.2
PRKCB-210ENST00000498739 ZNF780AO75290 641 aaPredicted RBP13.81□□□□□ -0.2
PRKCB-210ENST00000498739 ARL6IP5O75915 188 aa13.81□□□□□ -0.2
PRKCB-210ENST00000498739 TNFAIP8O95379 198 aa13.81□□□□□ -0.2
PRKCB-210ENST00000498739 IGHV4-38-2P0DP08 117 aa13.81□□□□□ -0.2
PRKCB-210ENST00000498739 RPL31P62899 125 aaKnown RBP13.81□□□□□ -0.2
PRKCB-210ENST00000498739 EDDM3AQ14507 147 aa13.81□□□□□ -0.2
PRKCB-210ENST00000498739 GRK1Q15835 563 aa13.81□□□□□ -0.2
PRKCB-210ENST00000498739 SLC22A6Q4U2R8 563 aa13.81□□□□□ -0.2
PRKCB-210ENST00000498739 GLIPR1L1Q6UWM5 242 aa13.81□□□□□ -0.2
PRKCB-210ENST00000498739 OSR2Q8N2R0 312 aa13.81□□□□□ -0.2
PRKCB-210ENST00000498739 KIR3DL3Q8N743 410 aa13.81□□□□□ -0.2
PRKCB-210ENST00000498739 OR4D6Q8NGJ1 314 aa13.81□□□□□ -0.2
PRKCB-210ENST00000498739 OR5D13Q8NGL4 314 aa13.81□□□□□ -0.2
PRKCB-210ENST00000498739 PPP1R35Q8TAP8 253 aa13.81□□□□□ -0.2
PRKCB-210ENST00000498739 DMRTB1Q96MA1 342 aa13.81□□□□□ -0.2
PRKCB-210ENST00000498739 OCEL1Q9H607 264 aa13.81□□□□□ -0.2
PRKCB-210ENST00000498739 NUP50Q9UKX7 468 aa13.81□□□□□ -0.2
PRKCB-210ENST00000498739 DEGS1O15121 323 aa13.8□□□□□ -0.2
PRKCB-210ENST00000498739 CALRP27797 417 aaKnown RBP13.8□□□□□ -0.2
PRKCB-210ENST00000498739 IL13RA2Q14627 380 aa13.8□□□□□ -0.2
PRKCB-210ENST00000498739 NEDD8Q15843 81 aa13.8□□□□□ -0.2
PRKCB-210ENST00000498739 PIGYQ3MUY2 71 aa13.8□□□□□ -0.2
PRKCB-210ENST00000498739 GLT8D1Q68CQ7 371 aa13.8□□□□□ -0.2
PRKCB-210ENST00000498739 Q6P435 159 aa13.8□□□□□ -0.2
PRKCB-210ENST00000498739 VMO1Q7Z5L0 202 aa13.8□□□□□ -0.2
PRKCB-210ENST00000498739 LYPD6Q86Y78 171 aa13.8□□□□□ -0.2
PRKCB-210ENST00000498739 Q8NFD4 153 aa13.8□□□□□ -0.2
PRKCB-210ENST00000498739 OR4S1Q8NGB4 309 aa13.8□□□□□ -0.2
PRKCB-210ENST00000498739 OR51T1Q8NGJ9 327 aa13.8□□□□□ -0.2
PRKCB-210ENST00000498739 C22orf15Q8WYQ4 148 aa13.8□□□□□ -0.2
PRKCB-210ENST00000498739 FOXRED1Q96CU9 486 aaPredicted RBP13.8□□□□□ -0.2
PRKCB-210ENST00000498739 UQCC2Q9BRT2 126 aa13.8□□□□□ -0.2
PRKCB-210ENST00000498739 SIRT7Q9NRC8 400 aa13.8□□□□□ -0.2
PRKCB-210ENST00000498739 PCDHB16Q9NRJ7 776 aa13.8□□□□□ -0.2
PRKCB-210ENST00000498739 ST3GAL6Q9Y274 331 aa13.8□□□□□ -0.2
PRKCB-210ENST00000498739 A0A1W2PP11 408 aa13.79□□□□□ -0.2
PRKCB-210ENST00000498739 A0A1W2PPH5 198 aa13.79□□□□□ -0.2
PRKCB-210ENST00000498739 LMO1P25800 156 aa13.79□□□□□ -0.2
PRKCB-210ENST00000498739 OR3A1P47881 315 aa13.79□□□□□ -0.2
PRKCB-210ENST00000498739 BLMHQ13867 455 aa13.79□□□□□ -0.2
PRKCB-210ENST00000498739 GPR176Q14439 515 aa13.79□□□□□ -0.2
PRKCB-210ENST00000498739 GPR157Q5UAW9 335 aa13.79□□□□□ -0.2
PRKCB-210ENST00000498739 TMEM200BQ69YZ2 307 aa13.79□□□□□ -0.2
PRKCB-210ENST00000498739 TPRX1Q8N7U7 411 aa13.79□□□□□ -0.2
PRKCB-210ENST00000498739 CHST4Q8NCG5 386 aa13.79□□□□□ -0.2
PRKCB-210ENST00000498739 TBC1D15Q8TC07 691 aa13.79□□□□□ -0.2
PRKCB-210ENST00000498739 LHX4Q969G2 390 aa13.79□□□□□ -0.2
PRKCB-210ENST00000498739 MS4A7Q9GZW8 240 aaPredicted RBP13.79□□□□□ -0.2
PRKCB-210ENST00000498739 PPA2Q9H2U2 334 aa13.79□□□□□ -0.2
PRKCB-210ENST00000498739 ZNF69Q9UC07 566 aa13.79□□□□□ -0.2
PRKCB-210ENST00000498739 SVEP1Q4LDE5 3571 aa13.78□□□□□ -0.2
PRKCB-210ENST00000498739 A0A0G2JK05 382 aa13.78□□□□□ -0.2
PRKCB-210ENST00000498739 TRDV1A0A1B0GX56 115 aa13.78□□□□□ -0.2
PRKCB-210ENST00000498739 MEX3AA1L020 520 aaKnown RBP13.78□□□□□ -0.2
PRKCB-210ENST00000498739 M0R1W7 72 aa13.78□□□□□ -0.2
PRKCB-210ENST00000498739 SLC33A1O00400 549 aaPredicted RBP13.78□□□□□ -0.2
PRKCB-210ENST00000498739 HSPB6O14558 160 aa13.78□□□□□ -0.2
PRKCB-210ENST00000498739 MGST3O14880 152 aa13.78□□□□□ -0.2
PRKCB-210ENST00000498739 GTF2F2P13984 249 aa13.78□□□□□ -0.2
PRKCB-210ENST00000498739 FPR2P25090 351 aa13.78□□□□□ -0.2
PRKCB-210ENST00000498739 RBM11P57052 281 aaKnown RBP13.78□□□□□ -0.2
PRKCB-210ENST00000498739 ZNF273Q14593 569 aa13.78□□□□□ -0.2
PRKCB-210ENST00000498739 CD200R1LQ6Q8B3 271 aa13.78□□□□□ -0.2
PRKCB-210ENST00000498739 PDZD9Q8IXQ8 264 aa13.78□□□□□ -0.2
PRKCB-210ENST00000498739 BPIFB2Q8N4F0 458 aa13.78□□□□□ -0.2
PRKCB-210ENST00000498739 Q8N7P7 452 aa13.78□□□□□ -0.2
PRKCB-210ENST00000498739 TSPAN14Q8NG11 270 aa13.78□□□□□ -0.2
PRKCB-210ENST00000498739 SLC6A7Q99884 636 aa13.78□□□□□ -0.2
PRKCB-210ENST00000498739 AK6Q9Y3D8 172 aaKnown RBP13.78□□□□□ -0.2
PRKCB-210ENST00000498739 SETD2Q9BYW2 2564 aaPredicted RBP13.78□□□□□ -0.2
PRKCB-210ENST00000498739 NIPBLQ6KC79 2804 aaeCLIP13.77□□□□□ -0.24e-6■■■□□ 14.9
PRKCB-210ENST00000498739 A0A087WXM4 84 aa13.77□□□□□ -0.21
PRKCB-210ENST00000498739 GEMIN2O14893 280 aaKnown RBP13.77□□□□□ -0.21
PRKCB-210ENST00000498739 CCL3L1P16619 93 aa13.77□□□□□ -0.21
PRKCB-210ENST00000498739 DLX1P56177 255 aa13.77□□□□□ -0.21
PRKCB-210ENST00000498739 PRB3Q04118 309 aaPredicted RBP13.77□□□□□ -0.21
PRKCB-210ENST00000498739 ATXN7L3Q14CW9 347 aaPredicted RBP13.77□□□□□ -0.21
PRKCB-210ENST00000498739 NHLRC3Q5JS37 347 aa13.77□□□□□ -0.21
PRKCB-210ENST00000498739 C1orf100Q5SVJ3 147 aa13.77□□□□□ -0.21
PRKCB-210ENST00000498739 SYT6Q5T7P8 510 aaPredicted RBP13.77□□□□□ -0.21
PRKCB-210ENST00000498739 RUSC1-AS1Q66K80 236 aa13.77□□□□□ -0.21
PRKCB-210ENST00000498739 BRD3OSQ6XYD6 125 aa13.77□□□□□ -0.21
PRKCB-210ENST00000498739 C1orf147Q96MC9 270 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms