RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 LPAR5Q9H1C0 372 aa11.32□□□□□ -0.6
CPNE1-227ENST00000498056 ATG5Q9H1Y0 275 aa11.32□□□□□ -0.6
CPNE1-227ENST00000498056 PPA2Q9H2U2 334 aa11.32□□□□□ -0.6
CPNE1-227ENST00000498056 RHBDL2Q9NX52 303 aa11.32□□□□□ -0.6
CPNE1-227ENST00000498056 ZNF581Q9P0T4 197 aa11.32□□□□□ -0.6
CPNE1-227ENST00000498056 COMMD3Q9UBI1 195 aa11.32□□□□□ -0.6
CPNE1-227ENST00000498056 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.32□□□□□ -0.63e-10■□□□□ 8.7
CPNE1-227ENST00000498056 AKAP9Q99996 3911 aa11.32□□□□□ -0.6
CPNE1-227ENST00000498056 CREBBPQ92793 2442 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 VPS13CQ709C8 3753 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 A6NHS1 94 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 CYSRT1A8MQ03 144 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 LDLRAD4O15165 306 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 SIGLEC5O15389 551 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 NDUFA2O43678 99 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 TMEM127O75204 238 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 FSTL3O95633 263 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 IGHV2-5P01817 119 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 HEXAP06865 529 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 RAB6AP20340 208 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 USF1P22415 310 aaPredicted RBP11.31□□□□□ -0.6
CPNE1-227ENST00000498056 IL2RGP31785 369 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 PRDX2P32119 198 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 PITPNBP48739 271 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 SCAND1P57086 179 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 SEC61A1P61619 476 aaKnown RBP11.31□□□□□ -0.6
CPNE1-227ENST00000498056 ATXN7L3Q14CW9 347 aaPredicted RBP11.31□□□□□ -0.6
CPNE1-227ENST00000498056 PAN3Q58A45 887 aaKnown RBP11.31□□□□□ -0.6
CPNE1-227ENST00000498056 UBE2NLQ5JXB2 153 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 MZT2AQ6P582 158 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 ZNF788Q6ZQV5 615 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 ZNF561Q8N587 486 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 ZNRF1Q8ND25 227 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 MAPK1IP1LQ8NDC0 245 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 Q8NFD4 153 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 NEK7Q8TDX7 302 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 ACOT12Q8WYK0 555 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 SLC25A38Q96DW6 304 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 DNTTIP1Q9H147 329 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 PATZ1Q9HBE1 687 aaKnown RBP11.31□□□□□ -0.6
CPNE1-227ENST00000498056 FBLN5Q9UBX5 448 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 MIOXQ9UGB7 285 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 RAB22AQ9UL26 194 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 SPATA2Q9UM82 520 aa11.31□□□□□ -0.6
CPNE1-227ENST00000498056 WNK2Q9Y3S1 2297 aa11.3□□□□□ -0.6
CPNE1-227ENST00000498056 A0A0A6YYD4 124 aa11.3□□□□□ -0.6
CPNE1-227ENST00000498056 F5H0A9 414 aaPredicted RBP11.3□□□□□ -0.6
CPNE1-227ENST00000498056 SLC33A1O00400 549 aaPredicted RBP11.3□□□□□ -0.6
CPNE1-227ENST00000498056 DEGS1O15121 323 aa11.3□□□□□ -0.6
CPNE1-227ENST00000498056 RGS5O15539 181 aa11.3□□□□□ -0.6
CPNE1-227ENST00000498056 NDUFB3O43676 98 aa11.3□□□□□ -0.6
CPNE1-227ENST00000498056 CHRM2P08172 466 aa11.3□□□□□ -0.6
CPNE1-227ENST00000498056 AMY2BP19961 511 aa11.3□□□□□ -0.6
CPNE1-227ENST00000498056 VEGFCP49767 419 aa11.3□□□□□ -0.6
CPNE1-227ENST00000498056 GNB2P62879 340 aa11.3□□□□□ -0.6
CPNE1-227ENST00000498056 EDDM3AQ14507 147 aa11.3□□□□□ -0.6
CPNE1-227ENST00000498056 ESCO2Q56NI9 601 aa11.3□□□□□ -0.6
CPNE1-227ENST00000498056 LRRC10Q5BKY1 277 aa11.3□□□□□ -0.6
CPNE1-227ENST00000498056 Q6P435 159 aa11.3□□□□□ -0.6
CPNE1-227ENST00000498056 FGFRL1Q8N441 504 aa11.3□□□□□ -0.6
CPNE1-227ENST00000498056 CHST4Q8NCG5 386 aa11.3□□□□□ -0.6
CPNE1-227ENST00000498056 MCFD2Q8NI22 146 aa11.3□□□□□ -0.6
CPNE1-227ENST00000498056 H1FXQ92522 213 aaKnown RBP11.3□□□□□ -0.6
CPNE1-227ENST00000498056 PHF21AQ96BD5 680 aa11.3□□□□□ -0.6
CPNE1-227ENST00000498056 SDSLQ96GA7 329 aa11.3□□□□□ -0.6
CPNE1-227ENST00000498056 TM2D1Q9BX74 207 aa11.3□□□□□ -0.6
CPNE1-227ENST00000498056 REG4Q9BYZ8 158 aa11.3□□□□□ -0.6
CPNE1-227ENST00000498056 SLIRPQ9GZT3 109 aaKnown RBP11.3□□□□□ -0.6
CPNE1-227ENST00000498056 ING3Q9NXR8 418 aa11.3□□□□□ -0.6
CPNE1-227ENST00000498056 SLC25A10Q9UBX3 287 aaPredicted RBP11.3□□□□□ -0.6
CPNE1-227ENST00000498056 MALRD1Q5VYJ5 2156 aa11.3□□□□□ -0.6
CPNE1-227ENST00000498056 FLNAP21333 2647 aaKnown RBP11.29□□□□□ -0.6
CPNE1-227ENST00000498056 A0A075B6Q4 140 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 TMEM82A0PJX8 343 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 METTL21EPA6NDL7 271 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 FAM90A10PA6NDY2 464 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 FAM90A18PA6NE21 464 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 FAM90A16PA6NEW6 464 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 FAM90A20PA6NIJ5 464 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 FAM90A8PA6NJQ4 464 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 FAM90A7PA6NKC0 464 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 FAM90A22PA8MWA6 464 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 FAM90A12PA8MX19 464 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 FAM90A5PA8MXJ8 464 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 FAM90A23PA8MXZ1 464 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 H7C1Q1 480 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 DVL1O14640 695 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 SMAD7O15105 426 aaKnown RBP11.29□□□□□ -0.6
CPNE1-227ENST00000498056 PSPNO60542 156 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 HPGDSO60760 199 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 PDCD6O75340 191 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 EIF4EP06730 217 aaKnown RBP11.29□□□□□ -0.6
CPNE1-227ENST00000498056 FAM90A15PP0C7V4 464 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 FAM90A13PP0C7W8 464 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 FAM90A14PP0C7W9 464 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 FAM90A24PP0C7X0 464 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 NDUFB7P17568 137 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 BLVRBP30043 206 aaPredicted RBP11.29□□□□□ -0.6
CPNE1-227ENST00000498056 GRK1Q15835 563 aa11.29□□□□□ -0.6
CPNE1-227ENST00000498056 MOGAT2Q3SYC2 334 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms