RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 SMN1Q16637 294 aaKnown RBP13.02□□□□□ -0.33
VIM-208ENST00000497849 C9orf152Q5JTZ5 239 aa13.02□□□□□ -0.33
VIM-208ENST00000497849 SLC35D3Q5M8T2 416 aa13.02□□□□□ -0.33
VIM-208ENST00000497849 KLHL30-AS1Q8NEE0 82 aa13.02□□□□□ -0.33
VIM-208ENST00000497849 OR4P4Q8NGL7 312 aa13.02□□□□□ -0.33
VIM-208ENST00000497849 OR6N2Q8NGY6 317 aa13.02□□□□□ -0.33
VIM-208ENST00000497849 CAPSLQ8WWF8 208 aa13.02□□□□□ -0.33
VIM-208ENST00000497849 INTS14Q96SY0 518 aa13.02□□□□□ -0.33
VIM-208ENST00000497849 KLHDC2Q9Y2U9 406 aa13.02□□□□□ -0.33
VIM-208ENST00000497849 NUDT19A8MXV4 375 aa13.01□□□□□ -0.33
VIM-208ENST00000497849 K7N7A8 449 aa13.01□□□□□ -0.33
VIM-208ENST00000497849 ISL1P61371 349 aa13.01□□□□□ -0.33
VIM-208ENST00000497849 ADAMTSL5Q6ZMM2 481 aa13.01□□□□□ -0.33
VIM-208ENST00000497849 OR5A2Q8NGI9 324 aa13.01□□□□□ -0.33
VIM-208ENST00000497849 RAX2Q96IS3 184 aa13.01□□□□□ -0.33
VIM-208ENST00000497849 ZFP57Q9NU63 452 aa13.01□□□□□ -0.33
VIM-208ENST00000497849 CLN6Q9NWW5 311 aa13.01□□□□□ -0.33
VIM-208ENST00000497849 OR14J1Q9UGF5 321 aa13.01□□□□□ -0.33
VIM-208ENST00000497849 SCOCQ9UIL1 159 aa13.01□□□□□ -0.33
VIM-208ENST00000497849 SORL1Q92673 2214 aa13□□□□□ -0.33
VIM-208ENST00000497849 OR5B21A6NL26 309 aa13□□□□□ -0.33
VIM-208ENST00000497849 MPZL2O60487 215 aa13□□□□□ -0.33
VIM-208ENST00000497849 NOS1APO75052 506 aaPredicted RBP13□□□□□ -0.33
VIM-208ENST00000497849 HTR1DP28221 377 aa13□□□□□ -0.33
VIM-208ENST00000497849 HTR1FP30939 366 aa13□□□□□ -0.33
VIM-208ENST00000497849 OR3A4PP47883 348 aa13□□□□□ -0.33
VIM-208ENST00000497849 BLVRAP53004 296 aa13□□□□□ -0.33
VIM-208ENST00000497849 GP2P55259 537 aaKnown RBP13□□□□□ -0.33
VIM-208ENST00000497849 SLC25A30Q5SVS4 291 aa13□□□□□ -0.33
VIM-208ENST00000497849 LCN1P1Q5VSP4 162 aa13□□□□□ -0.33
VIM-208ENST00000497849 LAIR2Q6ISS4 152 aa13□□□□□ -0.33
VIM-208ENST00000497849 KRT77Q7Z794 578 aa13□□□□□ -0.33
VIM-208ENST00000497849 GID4Q8IVV7 300 aa13□□□□□ -0.33
VIM-208ENST00000497849 BATF2Q8N1L9 274 aa13□□□□□ -0.33
VIM-208ENST00000497849 OR8B12Q8NGG6 310 aa13□□□□□ -0.33
VIM-208ENST00000497849 FBLIM1Q8WUP2 373 aa13□□□□□ -0.33
VIM-208ENST00000497849 THEM6Q8WUY1 208 aa13□□□□□ -0.33
VIM-208ENST00000497849 RNFT2Q96EX2 444 aa13□□□□□ -0.33
VIM-208ENST00000497849 ZNF714Q96N38 554 aa13□□□□□ -0.33
VIM-208ENST00000497849 TTTY10Q9BZA0 68 aa13□□□□□ -0.33
VIM-208ENST00000497849 ADGRL4Q9HBW9 690 aa13□□□□□ -0.33
VIM-208ENST00000497849 WARS2Q9UGM6 360 aaKnown RBP13□□□□□ -0.33
VIM-208ENST00000497849 HHLA2Q9UM44 414 aa13□□□□□ -0.33
VIM-208ENST00000497849 COPS3Q9UNS2 423 aa13□□□□□ -0.33
VIM-208ENST00000497849 SESN1Q9Y6P5 492 aa13□□□□□ -0.33
VIM-208ENST00000497849 HERC2O95714 4834 aa12.99□□□□□ -0.33
VIM-208ENST00000497849 MAGEA13PA6NCF6 341 aa12.99□□□□□ -0.33
VIM-208ENST00000497849 MAGEB4O15481 346 aaPredicted RBP12.99□□□□□ -0.33
VIM-208ENST00000497849 ZNF737O75373 536 aa12.99□□□□□ -0.33
VIM-208ENST00000497849 H2BFMP0C1H6 154 aa12.99□□□□□ -0.33
VIM-208ENST00000497849 BRS3P32247 399 aa12.99□□□□□ -0.33
VIM-208ENST00000497849 EDDM3BP56851 147 aa12.99□□□□□ -0.33
VIM-208ENST00000497849 RAB25P57735 213 aa12.99□□□□□ -0.33
VIM-208ENST00000497849 C9orf66Q5T8R8 295 aa12.99□□□□□ -0.33
VIM-208ENST00000497849 EGFL6Q8IUX8 553 aa12.99□□□□□ -0.33
VIM-208ENST00000497849 ZNF695Q8IW36 515 aa12.99□□□□□ -0.33
VIM-208ENST00000497849 ZNF676Q8N7Q3 588 aa12.99□□□□□ -0.33
VIM-208ENST00000497849 NOL4LQ96MY1 436 aaPredicted RBP12.99□□□□□ -0.33
VIM-208ENST00000497849 CITED4Q96RK1 184 aa12.99□□□□□ -0.33
VIM-208ENST00000497849 TBX5Q99593 518 aa12.99□□□□□ -0.33
VIM-208ENST00000497849 NRIP2Q9BQI9 281 aa12.99□□□□□ -0.33
VIM-208ENST00000497849 CLEC7AQ9BXN2 247 aa12.99□□□□□ -0.33
VIM-208ENST00000497849 YTHDF1Q9BYJ9 559 aaKnown RBP12.99□□□□□ -0.33
VIM-208ENST00000497849 TMEM133Q9H2Q1 129 aa12.99□□□□□ -0.33
VIM-208ENST00000497849 HES4Q9HCC6 221 aa12.99□□□□□ -0.33
VIM-208ENST00000497849 MYRFQ9Y2G1 1151 aa12.99□□□□□ -0.33
VIM-208ENST00000497849 SMAD5-AS1Q9Y6J3 95 aa12.99□□□□□ -0.33
VIM-208ENST00000497849 PRR32B1ATL7 298 aa12.98□□□□□ -0.33
VIM-208ENST00000497849 CCL24O00175 119 aa12.98□□□□□ -0.33
VIM-208ENST00000497849 PSMD9O00233 223 aa12.98□□□□□ -0.33
VIM-208ENST00000497849 NXPH2O95156 264 aa12.98□□□□□ -0.33
VIM-208ENST00000497849 TNFAIP8O95379 198 aa12.98□□□□□ -0.33
VIM-208ENST00000497849 LYNP07948 512 aa12.98□□□□□ -0.33
VIM-208ENST00000497849 ZNF91Q05481 1191 aa12.98□□□□□ -0.33
VIM-208ENST00000497849 RBM48Q5RL73 367 aaKnown RBP12.98□□□□□ -0.33
VIM-208ENST00000497849 C6orf141Q5SZD1 244 aa12.98□□□□□ -0.33
VIM-208ENST00000497849 MEDAGQ5VYS4 303 aa12.98□□□□□ -0.33
VIM-208ENST00000497849 MOB3CQ70IA8 216 aa12.98□□□□□ -0.33
VIM-208ENST00000497849 SLC35F2Q8IXU6 374 aa12.98□□□□□ -0.33
VIM-208ENST00000497849 ASCC1Q8N9N2 400 aaKnown RBP12.98□□□□□ -0.33
VIM-208ENST00000497849 CNN2Q99439 309 aaKnown RBP12.98□□□□□ -0.33
VIM-208ENST00000497849 DPM3Q9P2X0 92 aa12.98□□□□□ -0.33
VIM-208ENST00000497849 SLC22A13Q9Y226 551 aa12.98□□□□□ -0.33
VIM-208ENST00000497849 ZNF256Q9Y2P7 627 aaPredicted RBP12.98□□□□□ -0.33
VIM-208ENST00000497849 MMP23AO75900 390 aa12.97□□□□□ -0.33
VIM-208ENST00000497849 DBTP11182 482 aaKnown RBP12.97□□□□□ -0.33
VIM-208ENST00000497849 ALOX5APP20292 161 aa12.97□□□□□ -0.33
VIM-208ENST00000497849 ATP6V1E1P36543 226 aa12.97□□□□□ -0.33
VIM-208ENST00000497849 MAP2K3P46734 347 aa12.97□□□□□ -0.33
VIM-208ENST00000497849 HAAOP46952 286 aa12.97□□□□□ -0.33
VIM-208ENST00000497849 BAIAP2L2Q6UXY1 529 aa12.97□□□□□ -0.33
VIM-208ENST00000497849 OTOSQ8NHW6 89 aa12.97□□□□□ -0.33
VIM-208ENST00000497849 RFKQ969G6 155 aa12.97□□□□□ -0.33
VIM-208ENST00000497849 LGALS12Q96DT0 336 aa12.97□□□□□ -0.33
VIM-208ENST00000497849 Q96MT0 163 aa12.97□□□□□ -0.33
VIM-208ENST00000497849 YIPF3Q9GZM5 350 aa12.97□□□□□ -0.33
VIM-208ENST00000497849 SEC14L6B5MCN3 397 aa12.96□□□□□ -0.33
VIM-208ENST00000497849 J3QT63 122 aa12.96□□□□□ -0.33
VIM-208ENST00000497849 M0QZK8 103 aa12.96□□□□□ -0.33
VIM-208ENST00000497849 PSMA6P60900 246 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms