RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 DEFB118Q96PH6 123 aa9.31□□□□□ -0.92
TRAPPC12-223ENST00000497597 SAMD10Q9BYL1 202 aa9.31□□□□□ -0.92
TRAPPC12-223ENST00000497597 ZNF581Q9P0T4 197 aa9.31□□□□□ -0.92
TRAPPC12-223ENST00000497597 SRPK3Q9UPE1 567 aa9.31□□□□□ -0.92
TRAPPC12-223ENST00000497597 IGSF23A1L1A6 192 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 TMEM14DPA8MWL7 114 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 PLXNA2O75051 1894 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 FGF5P12034 268 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 RAB4AP20338 218 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 RPS21P63220 83 aaKnown RBP9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 FOXK1P85037 733 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 ZNF92Q03936 586 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 SSX7Q7RTT5 188 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 ZNF100Q8IYN0 542 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 CARFQ8N187 725 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 NT5CQ8TCD5 201 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 RBMXL1Q96E39 390 aaKnown RBP9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 ADAM19Q9H013 955 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 NAA60Q9H7X0 242 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 FOXJ2Q9P0K8 574 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 HEATR1Q9H583 2144 aaKnown RBP9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 NUP210Q8TEM1 1887 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 ZNF320A2RRD8 509 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 GRIFINA4D1Z8 144 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 DVL1O14640 695 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 ADAM20O43506 726 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 PTTG1IPP53801 180 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 PMP22Q01453 160 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 SGCBQ16585 318 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 FBXO46Q6PJ61 603 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 OR8B12Q8NGG6 310 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 VN1R17PQ8TDU5 208 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 ZNF845Q96IR2 970 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 SHDQ96IW2 340 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 GINS3Q9BRX5 216 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 DNAJC4Q9NNZ3 241 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 SLC2A9Q9NRM0 540 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 WNT16Q9UBV4 365 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 TMEM150CB9EJG8 249 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 OR7C1O76099 320 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 DDAH2O95865 285 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 IL18BPO95998 194 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 CSF2RAP15509 400 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 TNFSF10P50591 281 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 ROM1Q03395 351 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 DPPA3Q6W0C5 159 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 SLC16A14Q7RTX9 510 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 ZNF709Q8N972 641 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 OR51H1Q8NH63 302 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 ZNF160Q9HCG1 818 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 V9GYS6 101 aa9.3□□□□□ -0.92
TRAPPC12-223ENST00000497597 IGHV3-20A0A0C4DH32 117 aa9.29□□□□□ -0.92
TRAPPC12-223ENST00000497597 ANKUB1A6NFN9 424 aa9.29□□□□□ -0.92
TRAPPC12-223ENST00000497597 LILRB3O75022 631 aa9.29□□□□□ -0.92
TRAPPC12-223ENST00000497597 PDGFBP01127 241 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC12-223ENST00000497597 HBE1P02100 147 aa9.29□□□□□ -0.92
TRAPPC12-223ENST00000497597 POU2F2P09086 479 aa9.29□□□□□ -0.92
TRAPPC12-223ENST00000497597 EGR1P18146 543 aa9.29□□□□□ -0.92
TRAPPC12-223ENST00000497597 ARL4DP49703 201 aa9.29□□□□□ -0.92
TRAPPC12-223ENST00000497597 LHX4Q969G2 390 aa9.29□□□□□ -0.92
TRAPPC12-223ENST00000497597 BTF3L4Q96K17 158 aa9.29□□□□□ -0.92
TRAPPC12-223ENST00000497597 TXN2Q99757 166 aa9.29□□□□□ -0.92
TRAPPC12-223ENST00000497597 PCNX3Q9H6A9 2034 aa9.29□□□□□ -0.92
TRAPPC12-223ENST00000497597 COL6A3P12111 3177 aa9.29□□□□□ -0.92
TRAPPC12-223ENST00000497597 PRUNE2Q8WUY3 3088 aa9.29□□□□□ -0.92
TRAPPC12-223ENST00000497597 TDGF1P3P51864 188 aa9.29□□□□□ -0.92
TRAPPC12-223ENST00000497597 Q6ZVH6 145 aa9.29□□□□□ -0.92
TRAPPC12-223ENST00000497597 TMEM252Q8N6L7 170 aa9.29□□□□□ -0.92
TRAPPC12-223ENST00000497597 OR4F5Q8NH21 305 aa9.29□□□□□ -0.92
TRAPPC12-223ENST00000497597 OR5R1Q8NH85 324 aa9.29□□□□□ -0.92
TRAPPC12-223ENST00000497597 CTHRC1Q96CG8 243 aa9.29□□□□□ -0.92
TRAPPC12-223ENST00000497597 OR4F4Q96R69 305 aa9.29□□□□□ -0.92
TRAPPC12-223ENST00000497597 CERS4Q9HA82 394 aa9.29□□□□□ -0.92
TRAPPC12-223ENST00000497597 A0A1W2PNR3 127 aa9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 ZNHIT1O43257 154 aa9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 CLDN17P56750 224 aa9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 KRTDAPP60985 99 aa9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 OR8G2PQ6IF36 304 aa9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 PRR18Q8N4B5 295 aa9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 SNIP1Q8TAD8 396 aaKnown RBP9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 VPS25Q9BRG1 176 aa9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 PIGLQ9Y2B2 252 aa9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 ZNF318Q5VUA4 2279 aa9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 C5orf63A6NC05 138 aa9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 HSPB2A8KAH6 182 aa9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 CHST1O43916 411 aa9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 RBMXL2O75526 392 aaKnown RBP9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 OPN1MWP04001 364 aa9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 CTSDP07339 412 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 OPN1MW2P0DN77 364 aa9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 OPN1MW3P0DN78 364 aa9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 HSD11B2P80365 405 aa9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 HSF1Q00613 529 aa9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 HSPB2Q16082 182 aa9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 FAM78BQ5VT40 261 aa9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 SPSB3Q6PJ21 355 aa9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 UBALD1Q8TB05 177 aa9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 SCRT1Q9BWW7 348 aa9.28□□□□□ -0.92
TRAPPC12-223ENST00000497597 ZNF286AQ9HBT8 521 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms