RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 DCTN3O75935 186 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 GLSO94925 669 aaPredicted RBP4.6□□□□□ -1.67
BRCA1-224ENST00000497488 MMP7P09237 267 aaPredicted RBP4.6□□□□□ -1.67
BRCA1-224ENST00000497488 IGHV3-43DP0DP04 118 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 HIST1H1EP10412 219 aaKnown RBP4.6□□□□□ -1.67
BRCA1-224ENST00000497488 CD1EP15812 388 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 DTYMKP23919 212 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 TSPOP30536 169 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 CEACAM6P40199 344 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 OR4D2P58180 307 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 NANOS2P60321 138 aaKnown RBP4.6□□□□□ -1.67
BRCA1-224ENST00000497488 CXCL6P80162 114 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 PON3Q15166 354 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 GID4Q8IVV7 300 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 TMEM61Q8N0U2 210 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 OR52E4Q8NGH9 312 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 HAUS1Q96CS2 278 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 MAGEB18Q96M61 343 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 PRRT1Q99946 306 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 C19orf24Q9BVV8 132 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 MAP1LC3AQ9H492 121 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 ZDHHC11Q9H8X9 412 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 MYOZ1Q9NP98 299 aaPredicted RBP4.6□□□□□ -1.67
BRCA1-224ENST00000497488 MED4Q9NPJ6 270 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 RRAGDQ9NQL2 400 aaPredicted RBP4.6□□□□□ -1.67
BRCA1-224ENST00000497488 CCL28Q9NRJ3 127 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 TMEM100Q9NV29 134 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 UVRAGQ9P2Y5 699 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 SNX10Q9Y5X0 201 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 ROBO3Q96MS0 1386 aa4.6□□□□□ -1.67
BRCA1-224ENST00000497488 DAPL1A0PJW8 107 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 PHYHO14832 338 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 FAM189A1O60320 539 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 ZG16O60844 167 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 ENTPD6O75354 484 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 CNMDO75829 334 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 KRT75O95678 551 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 SERPINA1P01009 418 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 FSHBP01225 129 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 IGLV1-44P01699 117 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 GNAO1P09471 354 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 T-ENOLP0DO92 83 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 MSNP26038 577 aaKnown RBP4.59□□□□□ -1.67
BRCA1-224ENST00000497488 GCLMP48507 274 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 NCBP2P52298 156 aaKnown RBP eCLIP4.59□□□□□ -1.675e-10■■■■■ 33.9
BRCA1-224ENST00000497488 ZNF138P52744 262 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 REG3AQ06141 175 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 SHHQ15465 462 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 TTC32Q5I0X7 151 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 NT5DC3Q86UY8 548 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 GPR26Q8NDV2 337 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 RAD51AP1Q96B01 352 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 LRRC58Q96CX6 371 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 BIRC8Q96P09 236 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 SIGLEC12Q96PQ1 595 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 TMED9Q9BVK6 235 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 FGFBP2Q9BYJ0 223 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 MS4A6AQ9H2W1 248 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.59□□□□□ -1.67
BRCA1-224ENST00000497488 VNN3Q9NY84 501 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 NDRG2Q9UN36 371 aaKnown RBP4.59□□□□□ -1.67
BRCA1-224ENST00000497488 TP53TG5Q9Y2B4 290 aa4.59□□□□□ -1.67
BRCA1-224ENST00000497488 MKI67P46013 3256 aaKnown RBP4.58□□□□□ -1.68
BRCA1-224ENST00000497488 IGLV8-61A0A075B6I0 122 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 IGKV6D-41A0A0C4DH26 115 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 EFCAB9A8MZ26 197 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 KPNA3O00505 521 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-224ENST00000497488 TCAPO15273 167 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 RAD1O60671 282 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 RP2O75695 350 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 SOX14O95416 240 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 ME2P23368 584 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 COX7A1P24310 79 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 CD70P32970 193 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 MOGQ16653 247 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 CLEC12BQ2HXU8 276 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 AVPI1Q5T686 147 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 KCTD16Q68DU8 428 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 GATD1Q8NB37 220 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 OR11H7Q8NGC8 314 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 NEIL3Q8TAT5 605 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 BLNKQ8WV28 456 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 AURKBQ96GD4 344 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-224ENST00000497488 LYZL4Q96KX0 146 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 TAPBPLQ9BX59 468 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 HEXA-AS1Q9H8Q6 139 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 SLC25A22Q9H936 323 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 DIABLOQ9NR28 239 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 ORC6Q9Y5N6 252 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 ALG5Q9Y673 324 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 RALGAPA1Q6GYQ0 2036 aa4.58□□□□□ -1.68
BRCA1-224ENST00000497488 PLIN4Q96Q06 1357 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 CCDC171Q6TFL3 1326 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 EPM2AB3EWF7 344 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 KCNK1O00180 336 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 FADS1O60427 444 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 MRPL3P09001 348 aaKnown RBP4.57□□□□□ -1.68
BRCA1-224ENST00000497488 CHTF8P0CG12 524 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 ICAM2P13598 275 aa4.57□□□□□ -1.68
BRCA1-224ENST00000497488 CXCR1P25024 350 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms