RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 MS4A14Q96JA4 679 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 MBOAT7Q96N66 472 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 FOPNLQ96NB1 174 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 QKIQ96PU8 341 aaKnown RBP eCLIP3.39□□□□□ -1.873e-6■□□□□ 10.1
SF3B1-212ENST00000496458 RPF2Q9H7B2 306 aaKnown RBP3.39□□□□□ -1.87
SF3B1-212ENST00000496458 UBE2ZQ9H832 354 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-212ENST00000496458 C6orf50Q9HD87 102 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 ISYNA1Q9NPH2 558 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 NLE1Q9NVX2 485 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-212ENST00000496458 SDHAF2Q9NX18 166 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 SLC25A37Q9NYZ2 338 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 C3orf18Q9UK00 162 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 ZNF225Q9UK10 706 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 DOCK2Q92608 1830 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 MYH8P13535 1937 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 PAPPA2Q9BXP8 1791 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 HTTP42858 3142 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 THSD7BQ9C0I4 1608 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 FOCADQ5VW36 1801 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 IGKV2D-24A0A075B6R9 120 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 TRAV8-7A0A075B6U6 113 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 FAM92AA1XBS5 289 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 ZNF729A6NN14 1252 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-212ENST00000496458 HIDE1A8MVS5 230 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 H3BNH8 94 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 TNNC2P02585 160 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 S100A8P05109 93 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 CDK1P06493 297 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 ZNF250P15622 560 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 IGFBP3P17936 291 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-212ENST00000496458 CSNK2A2P19784 350 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-212ENST00000496458 TAC1P20366 129 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 ATP6V1B2P21281 511 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 SLC2A5P22732 501 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 ERP29P30040 261 aaKnown RBP3.38□□□□□ -1.87
SF3B1-212ENST00000496458 PLK1P53350 603 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 RPL31P62899 125 aaKnown RBP3.38□□□□□ -1.87
SF3B1-212ENST00000496458 TSPAN31Q12999 210 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 ECH1Q13011 328 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 FLOT2Q14254 428 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 GPNMBQ14956 572 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 MARCH8Q5T0T0 291 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 CPTPQ5TA50 214 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 SDHAF4Q5VUM1 108 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 ZFP1Q6P2D0 407 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 WDR74Q6RFH5 385 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-212ENST00000496458 UNQ9370/PRO34162Q6UXP9 181 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 RTL4Q6ZR62 310 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 GDPD3Q7L5L3 318 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 MRPL52Q86TS9 123 aaKnown RBP3.38□□□□□ -1.87
SF3B1-212ENST00000496458 PGAM4Q8N0Y7 254 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 C2orf73Q8N5S3 287 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-212ENST00000496458 LFNGQ8NES3 379 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 OR5D18Q8NGL1 313 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 ACTRT1Q8TDG2 376 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 SDR42E1Q8WUS8 393 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 C10orf82Q8WW14 230 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 TCEAL3Q969E4 200 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 S100PBPQ96BU1 408 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 PPP3R2Q96LZ3 170 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 PPP1R2P1Q96PQ5 205 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 OR5B12Q96R08 314 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 SERPINI1Q99574 410 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 SRXN1Q9BYN0 137 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 ASCL3Q9NQ33 180 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 TAS2R9Q9NYW1 312 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 SNX24Q9Y343 169 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 NDUFAF1Q9Y375 327 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 GOLT1BQ9Y3E0 138 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 DENND4AQ7Z401 1863 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 DNAH12Q6ZR08 3092 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 ABCB11O95342 1321 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 OTOFQ9HC10 1997 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 SSC5DA1L4H1 1573 aa3.38□□□□□ -1.87
SF3B1-212ENST00000496458 MYH6P13533 1939 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 A0A0G2JMP0 313 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 A0A0X1KG70 313 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 A6NDX4 124 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 ANKRD63C9JTQ0 380 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 SMKR1H3BMG3 65 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 H7C2Y5 167 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 SLC31A1O15431 190 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 SLC31A2O15432 143 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 NUPL2O15504 423 aaKnown RBP3.37□□□□□ -1.87
SF3B1-212ENST00000496458 RAD51CO43502 376 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 CDC40O60508 579 aaKnown RBP eCLIP3.37□□□□□ -1.87
SF3B1-212ENST00000496458 EDF1O60869 148 aaKnown RBP3.37□□□□□ -1.87
SF3B1-212ENST00000496458 EIF3GO75821 320 aaKnown RBP eCLIP3.37□□□□□ -1.87
SF3B1-212ENST00000496458 KLF8O95600 359 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-212ENST00000496458 ORM1P02763 201 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 RBP1P09455 135 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 ZNF35P13682 527 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 WARSP23381 471 aaKnown RBP3.37□□□□□ -1.87
SF3B1-212ENST00000496458 GPM6AP51674 278 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 AQP4P55087 323 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 MGAT3Q09327 533 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 SLC10A7Q0GE19 358 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 PDK2Q15119 407 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 PON3Q15166 354 aa3.37□□□□□ -1.87
SF3B1-212ENST00000496458 SPA17Q15506 151 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms