RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ABHD12Q8N2K0 398 aa18.61■□□□□ 0.57
COL27A1-208ENST00000494780 BCAS4Q8TDM0 211 aa18.61■□□□□ 0.57
COL27A1-208ENST00000494780 EME1Q96AY2 570 aa18.61■□□□□ 0.57
COL27A1-208ENST00000494780 GABARAPL3Q9BY60 117 aa18.61■□□□□ 0.57
COL27A1-208ENST00000494780 GAL3ST2Q9H3Q3 398 aa18.61■□□□□ 0.57
COL27A1-208ENST00000494780 LIN7BQ9HAP6 207 aa18.61■□□□□ 0.57
COL27A1-208ENST00000494780 HMG20AQ9NP66 347 aa18.61■□□□□ 0.57
COL27A1-208ENST00000494780 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.61■□□□□ 0.57
COL27A1-208ENST00000494780 TRGV10A0A0A0MS01 117 aa18.6■□□□□ 0.57
COL27A1-208ENST00000494780 FUOMA2VDF0 154 aa18.6■□□□□ 0.57
COL27A1-208ENST00000494780 FCGR1AP12314 374 aa18.6■□□□□ 0.57
COL27A1-208ENST00000494780 CD33P20138 364 aa18.6■□□□□ 0.57
COL27A1-208ENST00000494780 BRS3P32247 399 aa18.6■□□□□ 0.57
COL27A1-208ENST00000494780 SNU13P55769 128 aaKnown RBP18.6■□□□□ 0.57
COL27A1-208ENST00000494780 BDH1Q02338 343 aa18.6■□□□□ 0.57
COL27A1-208ENST00000494780 PDZK1IP1Q13113 114 aa18.6■□□□□ 0.57
COL27A1-208ENST00000494780 OR2G2Q8NGZ5 317 aa18.6■□□□□ 0.57
COL27A1-208ENST00000494780 ZNF596Q8TC21 504 aa18.6■□□□□ 0.57
COL27A1-208ENST00000494780 RNF166Q96A37 237 aaPredicted RBP18.6■□□□□ 0.57
COL27A1-208ENST00000494780 SPSB1Q96BD6 273 aa18.6■□□□□ 0.57
COL27A1-208ENST00000494780 EXOSC4Q9NPD3 245 aaKnown RBP18.6■□□□□ 0.57
COL27A1-208ENST00000494780 SIRPB1O00241 398 aa18.59■□□□□ 0.57
COL27A1-208ENST00000494780 SH2D1BO14796 132 aa18.59■□□□□ 0.57
COL27A1-208ENST00000494780 ISG15P05161 165 aa18.59■□□□□ 0.57
COL27A1-208ENST00000494780 CALCBP10092 127 aa18.59■□□□□ 0.57
COL27A1-208ENST00000494780 ZNF20P17024 532 aa18.59■□□□□ 0.57
COL27A1-208ENST00000494780 ARHGDIBP52566 201 aa18.59■□□□□ 0.57
COL27A1-208ENST00000494780 HEPN1Q6WQI6 88 aa18.59■□□□□ 0.57
COL27A1-208ENST00000494780 KCTD20Q7Z5Y7 419 aa18.59■□□□□ 0.57
COL27A1-208ENST00000494780 CAPSLQ8WWF8 208 aa18.59■□□□□ 0.57
COL27A1-208ENST00000494780 CORO2AQ92828 525 aa18.59■□□□□ 0.57
COL27A1-208ENST00000494780 FGGYQ96C11 551 aa18.59■□□□□ 0.57
COL27A1-208ENST00000494780 RIBC2Q9H4K1 309 aa18.59■□□□□ 0.57
COL27A1-208ENST00000494780 TAS2R3Q9NYW6 316 aa18.59■□□□□ 0.57
COL27A1-208ENST00000494780 GSTK1Q9Y2Q3 226 aa18.59■□□□□ 0.57
COL27A1-208ENST00000494780 A0A1W2PRX2 142 aa18.58■□□□□ 0.56
COL27A1-208ENST00000494780 LEUTXA8MZ59 168 aa18.58■□□□□ 0.56
COL27A1-208ENST00000494780 OR2H2O95918 312 aa18.58■□□□□ 0.56
COL27A1-208ENST00000494780 CDK2P24941 298 aa18.58■□□□□ 0.56
COL27A1-208ENST00000494780 PRAMEF5Q5TYX0 476 aa18.58■□□□□ 0.56
COL27A1-208ENST00000494780 FOXB2Q5VYV0 432 aa18.58■□□□□ 0.56
COL27A1-208ENST00000494780 FDX2Q6P4F2 183 aa18.58■□□□□ 0.56
COL27A1-208ENST00000494780 CENPVQ7Z7K6 275 aaPredicted RBP18.58■□□□□ 0.56
COL27A1-208ENST00000494780 STMN2Q93045 179 aa18.58■□□□□ 0.56
COL27A1-208ENST00000494780 OPALINQ96PE5 141 aa18.58■□□□□ 0.56
COL27A1-208ENST00000494780 MBOAT4Q96T53 435 aa18.58■□□□□ 0.56
COL27A1-208ENST00000494780 PCDHGB5Q9Y5G0 923 aa18.58■□□□□ 0.56
COL27A1-208ENST00000494780 KDM4BO94953 1096 aa18.57■□□□□ 0.56
COL27A1-208ENST00000494780 IGLV1-47P01700 117 aa18.57■□□□□ 0.56
COL27A1-208ENST00000494780 PF4V1P10720 104 aa18.57■□□□□ 0.56
COL27A1-208ENST00000494780 LMO1P25800 156 aa18.57■□□□□ 0.56
COL27A1-208ENST00000494780 CD34P28906 385 aa18.57■□□□□ 0.56
COL27A1-208ENST00000494780 BAIAP2L2Q6UXY1 529 aa18.57■□□□□ 0.56
COL27A1-208ENST00000494780 CREB3L1Q96BA8 519 aa18.57■□□□□ 0.56
COL27A1-208ENST00000494780 COMMD4Q9H0A8 199 aa18.57■□□□□ 0.56
COL27A1-208ENST00000494780 RHOFQ9HBH0 211 aa18.57■□□□□ 0.56
COL27A1-208ENST00000494780 FRRS1LQ9P0K9 344 aa18.57■□□□□ 0.56
COL27A1-208ENST00000494780 TSSC4Q9Y5U2 329 aaPredicted RBP18.57■□□□□ 0.56
COL27A1-208ENST00000494780 IGKV1-12A0A0C4DH73 117 aa18.56■□□□□ 0.56
COL27A1-208ENST00000494780 TCRBV4S1A1TA0A5B7 111 aa18.56■□□□□ 0.56
COL27A1-208ENST00000494780 OR2F2O95006 317 aa18.56■□□□□ 0.56
COL27A1-208ENST00000494780 IGKV1D-12P01611 117 aa18.56■□□□□ 0.56
COL27A1-208ENST00000494780 MT-ND2P03891 347 aa18.56■□□□□ 0.56
COL27A1-208ENST00000494780 OCM2P0CE71 109 aa18.56■□□□□ 0.56
COL27A1-208ENST00000494780 OCMP0CE72 109 aaPredicted RBP18.56■□□□□ 0.56
COL27A1-208ENST00000494780 IGLL1P15814 213 aa18.56■□□□□ 0.56
COL27A1-208ENST00000494780 CD24P25063 80 aa18.56■□□□□ 0.56
COL27A1-208ENST00000494780 BNIP1Q12981 228 aa18.56■□□□□ 0.56
COL27A1-208ENST00000494780 TRUB1Q8WWH5 349 aaKnown RBP18.56■□□□□ 0.56
COL27A1-208ENST00000494780 RBM14Q96PK6 669 aaKnown RBP18.56■□□□□ 0.56
COL27A1-208ENST00000494780 SLC25A33Q9BSK2 321 aa18.56■□□□□ 0.56
COL27A1-208ENST00000494780 OSBPL10Q9BXB5 764 aa18.56■□□□□ 0.56
COL27A1-208ENST00000494780 OAZ3Q9UMX2 235 aa18.56■□□□□ 0.56
COL27A1-208ENST00000494780 CSN2P05814 226 aa18.55■□□□□ 0.56
COL27A1-208ENST00000494780 CEACAM3P40198 252 aa18.55■□□□□ 0.56
COL27A1-208ENST00000494780 GLIPR1P48060 266 aa18.55■□□□□ 0.56
COL27A1-208ENST00000494780 CCR9P51686 369 aa18.55■□□□□ 0.56
COL27A1-208ENST00000494780 NANOS3P60323 173 aaKnown RBP18.55■□□□□ 0.56
COL27A1-208ENST00000494780 AESQ08117 197 aa18.55■□□□□ 0.56
COL27A1-208ENST00000494780 KPNB1Q14974 876 aaKnown RBP18.55■□□□□ 0.56
COL27A1-208ENST00000494780 TCTEX1D4Q5JR98 221 aa18.55■□□□□ 0.56
COL27A1-208ENST00000494780 C1orf146Q5VVC0 180 aa18.55■□□□□ 0.56
COL27A1-208ENST00000494780 RFT1Q96AA3 541 aa18.55■□□□□ 0.56
COL27A1-208ENST00000494780 CENPNQ96H22 339 aaPredicted RBP18.55■□□□□ 0.56
COL27A1-208ENST00000494780 HHLA2Q9UM44 414 aa18.55■□□□□ 0.56
COL27A1-208ENST00000494780 ODAMA1E959 279 aa18.54■□□□□ 0.56
COL27A1-208ENST00000494780 J3QRE1 110 aa18.54■□□□□ 0.56
COL27A1-208ENST00000494780 TOR1AO14656 332 aa18.54■□□□□ 0.56
COL27A1-208ENST00000494780 SLC16A6O15403 523 aa18.54■□□□□ 0.56
COL27A1-208ENST00000494780 LPLP06858 475 aa18.54■□□□□ 0.56
COL27A1-208ENST00000494780 HTR1AP08908 422 aa18.54■□□□□ 0.56
COL27A1-208ENST00000494780 ZNF44P15621 663 aa18.54■□□□□ 0.56
COL27A1-208ENST00000494780 GDNFP39905 211 aa18.54■□□□□ 0.56
COL27A1-208ENST00000494780 PTGFRP43088 359 aa18.54■□□□□ 0.56
COL27A1-208ENST00000494780 RASSF2P50749 326 aa18.54■□□□□ 0.56
COL27A1-208ENST00000494780 HLA-DRB5Q30154 266 aa18.54■□□□□ 0.56
COL27A1-208ENST00000494780 ABCA11PQ4W5N1 156 aa18.54■□□□□ 0.56
COL27A1-208ENST00000494780 CCDC121Q6ZUS5 278 aa18.54■□□□□ 0.56
COL27A1-208ENST00000494780 SAXO1Q8IYX7 474 aa18.54■□□□□ 0.56
COL27A1-208ENST00000494780 CHST4Q8NCG5 386 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms