RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 BLCAPP62952 87 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 MEF2CQ06413 473 aaPredicted RBP9.35□□□□□ -0.91
VTI1A-208ENST00000494728 PDZK1IP1Q13113 114 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 SLC25A30Q5SVS4 291 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 SAMD5Q5TGI4 173 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 TMEM244Q5VVB8 128 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 LHFPL2Q6ZUX7 228 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 Q8IYB0 196 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 ENTHD1Q8IYW4 607 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 CCDC54Q8NEL0 328 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 OR13C3Q8NGS6 347 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 RPS4Y2Q8TD47 263 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 TRUB1Q8WWH5 349 aaKnown RBP9.35□□□□□ -0.91
VTI1A-208ENST00000494728 FOXRED1Q96CU9 486 aaPredicted RBP9.35□□□□□ -0.91
VTI1A-208ENST00000494728 MALSU1Q96EH3 234 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 COQ2Q96H96 371 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 OR5M11Q96RB7 305 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 TMEM133Q9H2Q1 129 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 AMBNQ9NP70 447 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 EXOGQ9Y2C4 368 aaKnown RBP9.35□□□□□ -0.91
VTI1A-208ENST00000494728 GSTK1Q9Y2Q3 226 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 DAPL1A0PJW8 107 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 MGST3O14880 152 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 KDM4BO94953 1096 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 SERPINA3P01011 423 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 OPN1MWP04001 364 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 OPN1MW2P0DN77 364 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 OPN1MW3P0DN78 364 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 DBTP11182 482 aaKnown RBP9.34□□□□□ -0.91
VTI1A-208ENST00000494728 PEX2P28328 305 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 GLIPR1P48060 266 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 CCR9P51686 369 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 ZP1P60852 638 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 SLC34A1Q06495 639 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 AESQ08117 197 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 IL18R1Q13478 541 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 ALKBH1Q13686 389 aaKnown RBP9.34□□□□□ -0.91
VTI1A-208ENST00000494728 NSUN5P1Q3KNT7 163 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 SPIN3Q5JUX0 258 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 LPCAT4Q643R3 524 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 Q6P435 159 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 C11orf88Q6PI97 169 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 TRAPPC6BQ86SZ2 158 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 LHFPL3Q86UP9 236 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 APH1BQ8WW43 257 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 RGP1Q92546 391 aaPredicted RBP9.34□□□□□ -0.91
VTI1A-208ENST00000494728 SPSB1Q96BD6 273 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 SLC29A1Q99808 456 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 CITED2Q99967 270 aaPredicted RBP9.34□□□□□ -0.91
VTI1A-208ENST00000494728 ALG8Q9BVK2 526 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 CLEC7AQ9BXN2 247 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 WNT10AQ9GZT5 417 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 COMMD4Q9H0A8 199 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 MMP28Q9H239 520 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 PPIL3Q9H2H8 161 aaKnown RBP9.34□□□□□ -0.91
VTI1A-208ENST00000494728 SEBOXQ9HB31 216 aaPredicted RBP9.34□□□□□ -0.91
VTI1A-208ENST00000494728 ZNF286AQ9HBT8 521 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 ZNF581Q9P0T4 197 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 HHLA2Q9UM44 414 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 NBEAL2Q6ZNJ1 2754 aa9.34□□□□□ -0.91
VTI1A-208ENST00000494728 FAM90A22PA8MWA6 464 aa9.33□□□□□ -0.92
VTI1A-208ENST00000494728 F2RL2O00254 374 aa9.33□□□□□ -0.92
VTI1A-208ENST00000494728 SLC33A1O00400 549 aaPredicted RBP9.33□□□□□ -0.92
VTI1A-208ENST00000494728 FBXO24O75426 580 aa9.33□□□□□ -0.92
VTI1A-208ENST00000494728 ZFPL1O95159 310 aa9.33□□□□□ -0.92
VTI1A-208ENST00000494728 MT-ND2P03891 347 aa9.33□□□□□ -0.92
VTI1A-208ENST00000494728 PRKACBP22694 351 aa9.33□□□□□ -0.92
VTI1A-208ENST00000494728 CDK2P24941 298 aa9.33□□□□□ -0.92
VTI1A-208ENST00000494728 ERP29P30040 261 aaKnown RBP9.33□□□□□ -0.92
VTI1A-208ENST00000494728 DYNLT3P51808 116 aa9.33□□□□□ -0.92
VTI1A-208ENST00000494728 ATXN7L3Q14CW9 347 aaPredicted RBP9.33□□□□□ -0.92
VTI1A-208ENST00000494728 CDK5R1Q15078 307 aa9.33□□□□□ -0.92
VTI1A-208ENST00000494728 KPRPQ5T749 579 aaPredicted RBP9.33□□□□□ -0.92
VTI1A-208ENST00000494728 XAF1Q6GPH4 301 aa9.33□□□□□ -0.92
VTI1A-208ENST00000494728 ACBD7Q8N6N7 88 aa9.33□□□□□ -0.92
VTI1A-208ENST00000494728 OR51A2Q8NGJ7 313 aa9.33□□□□□ -0.92
VTI1A-208ENST00000494728 NDNFQ8TB73 568 aa9.33□□□□□ -0.92
VTI1A-208ENST00000494728 PDCD1LG2Q9BQ51 273 aa9.33□□□□□ -0.92
VTI1A-208ENST00000494728 EXOSC4Q9NPD3 245 aaKnown RBP9.33□□□□□ -0.92
VTI1A-208ENST00000494728 ABCB10Q9NRK6 738 aa9.33□□□□□ -0.92
VTI1A-208ENST00000494728 ERVK13-1Q9NX77 482 aa9.33□□□□□ -0.92
VTI1A-208ENST00000494728 ING3Q9NXR8 418 aa9.33□□□□□ -0.92
VTI1A-208ENST00000494728 A0A0G2JK05 382 aa9.32□□□□□ -0.92
VTI1A-208ENST00000494728 SH2D7A6NKC9 451 aaPredicted RBP9.32□□□□□ -0.92
VTI1A-208ENST00000494728 HSPB6O14558 160 aa9.32□□□□□ -0.92
VTI1A-208ENST00000494728 CYB5AP00167 134 aa9.32□□□□□ -0.92
VTI1A-208ENST00000494728 IGLV1-47P01700 117 aa9.32□□□□□ -0.92
VTI1A-208ENST00000494728 GTF2A1P52655 376 aaPredicted RBP9.32□□□□□ -0.92
VTI1A-208ENST00000494728 GALEQ14376 348 aa9.32□□□□□ -0.92
VTI1A-208ENST00000494728 C17orf58Q2M2W7 97 aa9.32□□□□□ -0.92
VTI1A-208ENST00000494728 MINOS1Q5TGZ0 78 aa9.32□□□□□ -0.92
VTI1A-208ENST00000494728 MEDAGQ5VYS4 303 aa9.32□□□□□ -0.92
VTI1A-208ENST00000494728 KCTD20Q7Z5Y7 419 aa9.32□□□□□ -0.92
VTI1A-208ENST00000494728 OCSTAMPQ9BR26 566 aa9.32□□□□□ -0.92
VTI1A-208ENST00000494728 UBE2J1Q9Y385 318 aaPredicted RBP9.32□□□□□ -0.92
VTI1A-208ENST00000494728 ORC6Q9Y5N6 252 aa9.32□□□□□ -0.92
VTI1A-208ENST00000494728 GMPPBQ9Y5P6 360 aa9.32□□□□□ -0.92
VTI1A-208ENST00000494728 MINOS1-NBL1R4GNA1 71 aa9.32□□□□□ -0.92
VTI1A-208ENST00000494728 ODAMA1E959 279 aa9.31□□□□□ -0.92
VTI1A-208ENST00000494728 GABRPO00591 440 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms