RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 CHST4Q8NCG5 386 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 Q8NFD4 153 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 OR4D6Q8NGJ1 314 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 C8orf46Q8TAG6 207 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 NANPQ8TBE9 248 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 TBC1D15Q8TC07 691 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 DMRTB1Q96MA1 342 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 ONECUT1Q9UBC0 465 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 SSR3Q9UNL2 185 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 PDCD5O14737 125 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 DEGS1O15121 323 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 AVPP01185 164 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 FAM157CP0CG43 387 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 GTF2F2P13984 249 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 RANBP1P43487 201 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 PSMD7P51665 324 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 RPL31P62899 125 aaKnown RBP10.31□□□□□ -0.76
TRA2A-209ENST00000494255 SCGB2A2Q13296 93 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 GRK1Q15835 563 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 METTL11BQ5VVY1 283 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 C22orf42Q6IC83 251 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 CMTM4Q8IZR5 234 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 FAM185AQ8N0U4 392 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 OR51T1Q8NGJ9 327 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 PLGRKTQ9HBL7 147 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 GHRLQ9UBU3 117 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 OPN4Q9UHM6 478 aa10.31□□□□□ -0.76
TRA2A-209ENST00000494255 TRAV1-2A0A0B4J238 106 aa10.3□□□□□ -0.76
TRA2A-209ENST00000494255 A0A1W2PPH5 198 aa10.3□□□□□ -0.76
TRA2A-209ENST00000494255 TMEM82A0PJX8 343 aa10.3□□□□□ -0.76
TRA2A-209ENST00000494255 TOX4O94842 621 aa10.3□□□□□ -0.76
TRA2A-209ENST00000494255 UBBP0CG47 229 aa10.3□□□□□ -0.76
TRA2A-209ENST00000494255 CD36P16671 472 aa10.3□□□□□ -0.76
TRA2A-209ENST00000494255 EDDM3BP56851 147 aa10.3□□□□□ -0.76
TRA2A-209ENST00000494255 RBM11P57052 281 aaKnown RBP10.3□□□□□ -0.76
TRA2A-209ENST00000494255 RIPPLY3P57055 190 aa10.3□□□□□ -0.76
TRA2A-209ENST00000494255 ARF6P62330 175 aa10.3□□□□□ -0.76
TRA2A-209ENST00000494255 PIGYQ3MUY2 71 aa10.3□□□□□ -0.76
TRA2A-209ENST00000494255 NHLRC3Q5JS37 347 aa10.3□□□□□ -0.76
TRA2A-209ENST00000494255 C1orf100Q5SVJ3 147 aa10.3□□□□□ -0.76
TRA2A-209ENST00000494255 C17orf107Q6ZR85 190 aa10.3□□□□□ -0.76
TRA2A-209ENST00000494255 C1orf229Q6ZS94 237 aaPredicted RBP10.3□□□□□ -0.76
TRA2A-209ENST00000494255 LINC00596Q86U02 117 aa10.3□□□□□ -0.76
TRA2A-209ENST00000494255 LYPD6Q86Y78 171 aa10.3□□□□□ -0.76
TRA2A-209ENST00000494255 KIR3DL3Q8N743 410 aa10.3□□□□□ -0.76
TRA2A-209ENST00000494255 LY6G5BQ8NDX9 201 aa10.3□□□□□ -0.76
TRA2A-209ENST00000494255 OR6M1Q8NGM8 313 aa10.3□□□□□ -0.76
TRA2A-209ENST00000494255 MRPS24Q96EL2 167 aaKnown RBP10.3□□□□□ -0.76
TRA2A-209ENST00000494255 PCGF1Q9BSM1 259 aa10.3□□□□□ -0.76
TRA2A-209ENST00000494255 CHST6Q9GZX3 395 aa10.3□□□□□ -0.76
TRA2A-209ENST00000494255 ST3GAL6Q9Y274 331 aa10.3□□□□□ -0.76
TRA2A-209ENST00000494255 AK6Q9Y3D8 172 aaKnown RBP10.3□□□□□ -0.76
TRA2A-209ENST00000494255 KPTNQ9Y664 436 aa10.3□□□□□ -0.76
TRA2A-209ENST00000494255 FN1P02751 2386 aaKnown RBP10.29□□□□□ -0.76
TRA2A-209ENST00000494255 SONP18583 2426 aaKnown RBP10.29□□□□□ -0.76
TRA2A-209ENST00000494255 FUOMA2VDF0 154 aa10.29□□□□□ -0.76
TRA2A-209ENST00000494255 MGST3O14880 152 aa10.29□□□□□ -0.76
TRA2A-209ENST00000494255 PSPNO60542 156 aa10.29□□□□□ -0.76
TRA2A-209ENST00000494255 CRTAPO75718 401 aaPredicted RBP10.29□□□□□ -0.76
TRA2A-209ENST00000494255 LMO1P25800 156 aa10.29□□□□□ -0.76
TRA2A-209ENST00000494255 HTR2CP28335 458 aa10.29□□□□□ -0.76
TRA2A-209ENST00000494255 FGF9P31371 208 aaPredicted RBP10.29□□□□□ -0.76
TRA2A-209ENST00000494255 BLMHQ13867 455 aa10.29□□□□□ -0.76
TRA2A-209ENST00000494255 EDDM3AQ14507 147 aa10.29□□□□□ -0.76
TRA2A-209ENST00000494255 PDCD1Q15116 288 aa10.29□□□□□ -0.76
TRA2A-209ENST00000494255 Q6P435 159 aa10.29□□□□□ -0.76
TRA2A-209ENST00000494255 OR4S1Q8NGB4 309 aa10.29□□□□□ -0.76
TRA2A-209ENST00000494255 OR4M1Q8NGD0 313 aa10.29□□□□□ -0.76
TRA2A-209ENST00000494255 UPRTQ96BW1 309 aa10.29□□□□□ -0.76
TRA2A-209ENST00000494255 WDFY2Q96P53 400 aa10.29□□□□□ -0.76
TRA2A-209ENST00000494255 CST11Q9H112 138 aa10.29□□□□□ -0.76
TRA2A-209ENST00000494255 PPA2Q9H2U2 334 aa10.29□□□□□ -0.76
TRA2A-209ENST00000494255 C19orf12Q9NSK7 152 aa10.29□□□□□ -0.76
TRA2A-209ENST00000494255 TXNL4BQ9NX01 149 aaKnown RBP10.29□□□□□ -0.76
TRA2A-209ENST00000494255 V9GY05 133 aa10.29□□□□□ -0.76
TRA2A-209ENST00000494255 MTORP42345 2549 aa10.29□□□□□ -0.76
TRA2A-209ENST00000494255 TRIM64CA6NLI5 447 aa10.28□□□□□ -0.76
TRA2A-209ENST00000494255 SLC33A1O00400 549 aaPredicted RBP10.28□□□□□ -0.76
TRA2A-209ENST00000494255 SLC17A2O00624 439 aa10.28□□□□□ -0.76
TRA2A-209ENST00000494255 OR7C1O76099 320 aaPredicted RBP10.28□□□□□ -0.76
TRA2A-209ENST00000494255 JUNBP17275 347 aaPredicted RBP10.28□□□□□ -0.76
TRA2A-209ENST00000494255 OR3A1P47881 315 aa10.28□□□□□ -0.76
TRA2A-209ENST00000494255 RAB11BQ15907 218 aa10.28□□□□□ -0.76
TRA2A-209ENST00000494255 MPV17LQ2QL34 196 aa10.28□□□□□ -0.76
TRA2A-209ENST00000494255 TIMM50Q3ZCQ8 353 aa10.28□□□□□ -0.76
TRA2A-209ENST00000494255 PAN3Q58A45 887 aaKnown RBP10.28□□□□□ -0.76
TRA2A-209ENST00000494255 CHCHD6Q9BRQ6 235 aa10.28□□□□□ -0.76
TRA2A-209ENST00000494255 SIRPDQ9H106 197 aa10.28□□□□□ -0.76
TRA2A-209ENST00000494255 OR51E2Q9H255 320 aa10.28□□□□□ -0.76
TRA2A-209ENST00000494255 BANF2Q9H503 90 aa10.28□□□□□ -0.76
TRA2A-209ENST00000494255 NSD1Q96L73 2696 aaPredicted RBP10.28□□□□□ -0.76
TRA2A-209ENST00000494255 A0A0G2JK05 382 aa10.28□□□□□ -0.76
TRA2A-209ENST00000494255 A0A1W2PP11 408 aa10.28□□□□□ -0.76
TRA2A-209ENST00000494255 hCG_1809904A0A1W2PP81 198 aa10.28□□□□□ -0.76
TRA2A-209ENST00000494255 A0A1W2PPE2 198 aa10.28□□□□□ -0.76
TRA2A-209ENST00000494255 A0A1W2PR64 198 aa10.28□□□□□ -0.76
TRA2A-209ENST00000494255 A0A1W2PRV1 198 aa10.28□□□□□ -0.76
TRA2A-209ENST00000494255 M0R1W7 72 aa10.28□□□□□ -0.76
TRA2A-209ENST00000494255 GEMIN2O14893 280 aaKnown RBP10.28□□□□□ -0.76
TRA2A-209ENST00000494255 SLC22A1O15245 554 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms