RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 ACSM3Q53FZ2 586 aa9.58□□□□□ -0.88
UBA3-211ENST00000493957 Q6P435 159 aa9.58□□□□□ -0.88
UBA3-211ENST00000493957 METAP1DQ6UB28 335 aaPredicted RBP9.58□□□□□ -0.88
UBA3-211ENST00000493957 C17orf107Q6ZR85 190 aa9.58□□□□□ -0.88
UBA3-211ENST00000493957 VMO1Q7Z5L0 202 aa9.58□□□□□ -0.88
UBA3-211ENST00000493957 PDZD9Q8IXQ8 264 aa9.58□□□□□ -0.88
UBA3-211ENST00000493957 Q8IYB0 196 aa9.58□□□□□ -0.88
UBA3-211ENST00000493957 TPRX1Q8N7U7 411 aa9.58□□□□□ -0.88
UBA3-211ENST00000493957 ZSCAN4Q8NAM6 433 aaPredicted RBP9.58□□□□□ -0.88
UBA3-211ENST00000493957 OR4S1Q8NGB4 309 aa9.58□□□□□ -0.88
UBA3-211ENST00000493957 UFD1Q92890 307 aa9.58□□□□□ -0.88
UBA3-211ENST00000493957 CYYR1Q96J86 154 aa9.58□□□□□ -0.88
UBA3-211ENST00000493957 ZNF48Q96MX3 618 aaPredicted RBP9.58□□□□□ -0.88
UBA3-211ENST00000493957 MGLLQ99685 303 aa9.58□□□□□ -0.88
UBA3-211ENST00000493957 CNTD2Q9H8S5 307 aa9.58□□□□□ -0.88
UBA3-211ENST00000493957 SIRT7Q9NRC8 400 aa9.58□□□□□ -0.88
UBA3-211ENST00000493957 NUP50Q9UKX7 468 aa9.58□□□□□ -0.88
UBA3-211ENST00000493957 BLOC1S6Q9UL45 172 aa9.58□□□□□ -0.88
UBA3-211ENST00000493957 SF3B6Q9Y3B4 125 aaKnown RBP9.58□□□□□ -0.88
UBA3-211ENST00000493957 CENPVL3A0A0U1RRI6 287 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 A0A1W2PQ09 198 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 MAGEB3O15480 346 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 SC5DO75845 299 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 VENTXO95231 258 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 OR2H2O95918 312 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 IFNA2P01563 188 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 LIPFP07098 398 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 CHRM2P08172 466 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 CCL3L1P16619 93 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 CPEP16870 476 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 ZNF93P35789 620 aaPredicted RBP9.57□□□□□ -0.88
UBA3-211ENST00000493957 PTGFRP43088 359 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 OR3A1P47881 315 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 EDDM3AQ14507 147 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 PIGYQ3MUY2 71 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 METTL11BQ5VVY1 283 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 TMEM200BQ69YZ2 307 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 TMEM91Q6ZNR0 172 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 TCF23Q7RTU1 214 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 ZNF367Q7RTV3 350 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 CEACAM19Q7Z692 300 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 LRRTM1Q86UE6 522 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 LYPD6Q86Y78 171 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 PHC2Q8IXK0 858 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 PNKDQ8N490 385 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 PXT1Q8NFP0 134 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 LHX4Q969G2 390 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 MUL1Q969V5 352 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 NR1H4Q96RI1 486 aaPredicted RBP9.57□□□□□ -0.88
UBA3-211ENST00000493957 MDFIQ99750 246 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 ISYNA1Q9NPH2 558 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 ING4Q9UNL4 249 aa9.57□□□□□ -0.88
UBA3-211ENST00000493957 A0A1W2PRD5 423 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 A0A1W2PRF3 423 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 A0A1W2PRM7 423 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 HTR3BO95264 441 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 GABRR1P24046 479 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 RPL31P62899 125 aaKnown RBP9.56□□□□□ -0.88
UBA3-211ENST00000493957 FABP5Q01469 135 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 SCN1BQ07699 218 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 C11orf91Q3C1V1 193 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 KRTAP21-3Q3LHN1 58 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 KRTAP24-1Q3LI83 254 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 SPIN3Q5JUX0 258 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 ASCL4Q6XD76 172 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 SPARTQ8N0X7 666 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 OR8H2Q8N162 312 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 JAGN1Q8N5M9 183 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 MS4A15Q8N5U1 240 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 SIGLECL1Q8N7X8 197 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 OR4D6Q8NGJ1 314 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 SNX22Q96L94 193 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 PPA2Q9H2U2 334 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 KCNK15Q9H427 330 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 EXOSC4Q9NPD3 245 aaKnown RBP9.56□□□□□ -0.88
UBA3-211ENST00000493957 ESM1Q9NQ30 184 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 CKLFQ9UBR5 152 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 FOXJ3Q9UPW0 622 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 KPTNQ9Y664 436 aa9.56□□□□□ -0.88
UBA3-211ENST00000493957 TRBV23-1A0A0A0MS06 115 aa9.55□□□□□ -0.88
UBA3-211ENST00000493957 RNASEK-C17orf49H0YIS7 233 aa9.55□□□□□ -0.88
UBA3-211ENST00000493957 SLC33A1O00400 549 aaPredicted RBP9.55□□□□□ -0.88
UBA3-211ENST00000493957 HSPB6O14558 160 aa9.55□□□□□ -0.88
UBA3-211ENST00000493957 SH2D1BO14796 132 aa9.55□□□□□ -0.88
UBA3-211ENST00000493957 UCHL1P09936 223 aa9.55□□□□□ -0.88
UBA3-211ENST00000493957 ZNF44P15621 663 aa9.55□□□□□ -0.88
UBA3-211ENST00000493957 SERPINA2P20848 420 aa9.55□□□□□ -0.88
UBA3-211ENST00000493957 MAPK3P27361 379 aaPredicted RBP9.55□□□□□ -0.88
UBA3-211ENST00000493957 MTNR1BP49286 362 aa9.55□□□□□ -0.88
UBA3-211ENST00000493957 DLX6P56179 175 aa9.55□□□□□ -0.88
UBA3-211ENST00000493957 EDDM3BP56851 147 aa9.55□□□□□ -0.88
UBA3-211ENST00000493957 GPR50Q13585 617 aa9.55□□□□□ -0.88
UBA3-211ENST00000493957 RSU1Q15404 277 aa9.55□□□□□ -0.88
UBA3-211ENST00000493957 GRK1Q15835 563 aa9.55□□□□□ -0.88
UBA3-211ENST00000493957 ELP2Q6IA86 826 aa9.55□□□□□ -0.88
UBA3-211ENST00000493957 HCP5Q6MZN7 132 aa9.55□□□□□ -0.88
UBA3-211ENST00000493957 FIP1L1Q6UN15 594 aaKnown RBP9.55□□□□□ -0.88
UBA3-211ENST00000493957 BPIFB2Q8N4F0 458 aa9.55□□□□□ -0.88
UBA3-211ENST00000493957 C11orf42Q8N5U0 333 aa9.55□□□□□ -0.88
UBA3-211ENST00000493957 TEX29Q8N6K0 151 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms