RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 FOXN4Q96NZ1 517 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 WFDC1Q9HC57 220 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 ANKRD10Q9NXR5 420 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 YIPF1Q9Y548 306 aa6.03□□□□□ -1.44
VPS13B-205ENST00000493587 TNRC18O15417 2968 aaPredicted RBP6.03□□□□□ -1.44
VPS13B-205ENST00000493587 TRAV27A0A087WT01 109 aa6.02□□□□□ -1.44
VPS13B-205ENST00000493587 ZNF840PA6NDX5 716 aa6.02□□□□□ -1.44
VPS13B-205ENST00000493587 METTL12A8MUP2 240 aa6.02□□□□□ -1.44
VPS13B-205ENST00000493587 C10orf142B7Z368 130 aa6.02□□□□□ -1.44
VPS13B-205ENST00000493587 TNFRSF10CO14798 259 aa6.02□□□□□ -1.44
VPS13B-205ENST00000493587 HBE1P02100 147 aa6.02□□□□□ -1.44
VPS13B-205ENST00000493587 ZNF708P17019 499 aa6.02□□□□□ -1.44
VPS13B-205ENST00000493587 RPS4Y1P22090 263 aaKnown RBP6.02□□□□□ -1.44
VPS13B-205ENST00000493587 AOAHP28039 575 aa6.02□□□□□ -1.44
VPS13B-205ENST00000493587 PTGER1P34995 402 aa6.02□□□□□ -1.44
VPS13B-205ENST00000493587 P2RY1P47900 373 aa6.02□□□□□ -1.44
VPS13B-205ENST00000493587 AMTP48728 403 aa6.02□□□□□ -1.44
VPS13B-205ENST00000493587 MRGPREQ86SM8 312 aa6.02□□□□□ -1.44
VPS13B-205ENST00000493587 CSNK1A1LQ8N752 337 aa6.02□□□□□ -1.44
VPS13B-205ENST00000493587 RNF115Q9Y4L5 304 aa6.02□□□□□ -1.44
VPS13B-205ENST00000493587 TRAV8-7A0A075B6U6 113 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 G3V4G9 280 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 CDC42EP2O14613 210 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 HCRTR1O43613 425 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 TNFSF15O95150 251 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 SFT2D2O95562 160 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 FURINP09958 794 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 NTF3P20783 257 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 CCR2P41597 374 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 RGRP47804 291 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 RPS20P60866 119 aaKnown RBP6.02□□□□□ -1.45
VPS13B-205ENST00000493587 SRPXP78539 464 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 DMWDQ09019 674 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 RTP5Q14D33 572 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 BSXQ3C1V8 233 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 TMEM176BQ3YBM2 270 aaPredicted RBP6.02□□□□□ -1.45
VPS13B-205ENST00000493587 GGTA1PQ4G0N0 100 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 PHYHD1Q5SRE7 291 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 BHLHA15Q7RTS1 189 aaPredicted RBP6.02□□□□□ -1.45
VPS13B-205ENST00000493587 SMIM20Q8N5G0 67 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 TMEM156Q8N614 296 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 UBTD2Q8WUN7 234 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 APOBEC4Q8WW27 367 aaKnown RBP6.02□□□□□ -1.45
VPS13B-205ENST00000493587 FAM46BQ96A09 425 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 TMEM45BQ96B21 275 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 FLRT3Q9NZU0 649 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 LHX3Q9UBR4 397 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 CDC42EP3Q9UKI2 254 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 OR51B2Q9Y5P1 312 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 SHISA7A6NL88 538 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 SCGB2A1O75556 95 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 NUDT3O95989 172 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 TIMP1P01033 207 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 H2BFMP0C1H6 154 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 ZNF735P0CB33 412 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 PSG9Q00887 426 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 PMPCAQ10713 525 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 MORN2Q502X0 79 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 FAM78BQ5VT40 261 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 RAET1LQ5VY80 246 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 LCN15Q6UWW0 184 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 TGIF2LYQ8IUE0 185 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 C1orf174Q8IYL3 243 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 CXorf40BQ96DE9 158 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 Q96M85 177 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 MRPL13Q9BYD1 178 aaKnown RBP6.02□□□□□ -1.45
VPS13B-205ENST00000493587 A4GALTQ9NPC4 353 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 PLA2G3Q9NZ20 509 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 PRSS50Q9UI38 385 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 KLK13Q9UKR3 277 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 ADAMTS20P59510 1910 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 TICRRQ7Z2Z1 1910 aa6.02□□□□□ -1.45
VPS13B-205ENST00000493587 CDIPTO14735 213 aa6.01□□□□□ -1.45
VPS13B-205ENST00000493587 ZNF205O95201 554 aa6.01□□□□□ -1.45
VPS13B-205ENST00000493587 TACSTD2P09758 323 aa6.01□□□□□ -1.45
VPS13B-205ENST00000493587 CRISP2P16562 243 aa6.01□□□□□ -1.45
VPS13B-205ENST00000493587 PPOXP50336 477 aa6.01□□□□□ -1.45
VPS13B-205ENST00000493587 TGFBR3Q03167 851 aa6.01□□□□□ -1.45
VPS13B-205ENST00000493587 MLC1Q15049 377 aa6.01□□□□□ -1.45
VPS13B-205ENST00000493587 HLA-BQ31612 363 aa6.01□□□□□ -1.45
VPS13B-205ENST00000493587 C9orf50Q5SZB4 431 aa6.01□□□□□ -1.45
VPS13B-205ENST00000493587 FAM71F2Q6NXP2 309 aa6.01□□□□□ -1.45
VPS13B-205ENST00000493587 WDR82Q6UXN9 313 aa6.01□□□□□ -1.45
VPS13B-205ENST00000493587 OR52E1Q8NGJ3 308 aa6.01□□□□□ -1.45
VPS13B-205ENST00000493587 SCGB3A2Q96PL1 93 aa6.01□□□□□ -1.45
VPS13B-205ENST00000493587 TMEM204Q9BSN7 226 aa6.01□□□□□ -1.45
VPS13B-205ENST00000493587 CMC2Q9NRP2 79 aa6.01□□□□□ -1.45
VPS13B-205ENST00000493587 COL5A1P20908 1838 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-205ENST00000493587 A0A087WV48 116 aa6.01□□□□□ -1.45
VPS13B-205ENST00000493587 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.01□□□□□ -1.45
VPS13B-205ENST00000493587 A0A0D9SEW6 157 aa6.01□□□□□ -1.45
VPS13B-205ENST00000493587 J3QRE1 110 aa6.01□□□□□ -1.45
VPS13B-205ENST00000493587 HMGN4O00479 90 aa6.01□□□□□ -1.45
VPS13B-205ENST00000493587 HRASP01112 189 aa6.01□□□□□ -1.45
VPS13B-205ENST00000493587 CATP04040 527 aaKnown RBP6.01□□□□□ -1.45
VPS13B-205ENST00000493587 IRF1P10914 325 aa6.01□□□□□ -1.45
VPS13B-205ENST00000493587 SCGB1A1P11684 91 aa6.01□□□□□ -1.45
VPS13B-205ENST00000493587 OR1D2P34982 312 aa6.01□□□□□ -1.45
VPS13B-205ENST00000493587 VASPP50552 380 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-205ENST00000493587 EMP2P54851 167 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms