RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 ORC6Q9Y5N6 252 aa9.32□□□□□ -0.92
COL6A3-213ENST00000493475 LOC107986453A0A1B0GWG9 222 aa9.31□□□□□ -0.92
COL6A3-213ENST00000493475 A0A1W2PQL4 384 aaPredicted RBP9.31□□□□□ -0.92
COL6A3-213ENST00000493475 ZAR1LA6NP61 321 aa9.31□□□□□ -0.92
COL6A3-213ENST00000493475 PRR32B1ATL7 298 aa9.31□□□□□ -0.92
COL6A3-213ENST00000493475 E9PQ18 207 aa9.31□□□□□ -0.92
COL6A3-213ENST00000493475 INMTO95050 263 aa9.31□□□□□ -0.92
COL6A3-213ENST00000493475 PRB2P02812 416 aaPredicted RBP9.31□□□□□ -0.92
COL6A3-213ENST00000493475 FAM106CPP0CH98 169 aa9.31□□□□□ -0.92
COL6A3-213ENST00000493475 PRKACAP17612 351 aa9.31□□□□□ -0.92
COL6A3-213ENST00000493475 DAPP51397 102 aa9.31□□□□□ -0.92
COL6A3-213ENST00000493475 BNIP1Q12981 228 aa9.31□□□□□ -0.92
COL6A3-213ENST00000493475 ZNF146Q15072 292 aa9.31□□□□□ -0.92
COL6A3-213ENST00000493475 UBE2V2Q15819 145 aa9.31□□□□□ -0.92
COL6A3-213ENST00000493475 C12orf73Q69YU5 71 aa9.31□□□□□ -0.92
COL6A3-213ENST00000493475 ABHD12Q8N2K0 398 aa9.31□□□□□ -0.92
COL6A3-213ENST00000493475 CHST4Q8NCG5 386 aa9.31□□□□□ -0.92
COL6A3-213ENST00000493475 OR51D1Q8NGF3 324 aa9.31□□□□□ -0.92
COL6A3-213ENST00000493475 OR8J1Q8NGP2 316 aa9.31□□□□□ -0.92
COL6A3-213ENST00000493475 OSBPL10Q9BXB5 764 aa9.31□□□□□ -0.92
COL6A3-213ENST00000493475 CHST6Q9GZX3 395 aa9.31□□□□□ -0.92
COL6A3-213ENST00000493475 IMPAD1Q9NX62 359 aa9.31□□□□□ -0.92
COL6A3-213ENST00000493475 TAS2R3Q9NYW6 316 aa9.31□□□□□ -0.92
COL6A3-213ENST00000493475 GNG8Q9UK08 70 aa9.31□□□□□ -0.92
COL6A3-213ENST00000493475 CMYA5Q8N3K9 4069 aa9.31□□□□□ -0.92
COL6A3-213ENST00000493475 NOTCH3Q9UM47 2321 aa9.3□□□□□ -0.92
COL6A3-213ENST00000493475 A0A1W2PRX2 142 aa9.3□□□□□ -0.92
COL6A3-213ENST00000493475 OOSP1A8MZH6 123 aa9.3□□□□□ -0.92
COL6A3-213ENST00000493475 ZNF44P15621 663 aa9.3□□□□□ -0.92
COL6A3-213ENST00000493475 PTGFRP43088 359 aa9.3□□□□□ -0.92
COL6A3-213ENST00000493475 BDH1Q02338 343 aa9.3□□□□□ -0.92
COL6A3-213ENST00000493475 ZNF91Q05481 1191 aa9.3□□□□□ -0.92
COL6A3-213ENST00000493475 ATP6AP1Q15904 470 aa9.3□□□□□ -0.92
COL6A3-213ENST00000493475 CCBE1Q6UXH8 406 aaPredicted RBP9.3□□□□□ -0.92
COL6A3-213ENST00000493475 HEPN1Q6WQI6 88 aa9.3□□□□□ -0.92
COL6A3-213ENST00000493475 UTS2BQ765I0 119 aa9.3□□□□□ -0.92
COL6A3-213ENST00000493475 DYNAPQ8N1N2 210 aa9.3□□□□□ -0.92
COL6A3-213ENST00000493475 OCSTAMPQ9BR26 566 aa9.3□□□□□ -0.92
COL6A3-213ENST00000493475 SLC25A33Q9BSK2 321 aa9.3□□□□□ -0.92
COL6A3-213ENST00000493475 AURKAIP1Q9NWT8 199 aaPredicted RBP9.3□□□□□ -0.92
COL6A3-213ENST00000493475 OR6C3Q9NZP0 311 aa9.3□□□□□ -0.92
COL6A3-213ENST00000493475 TMEM82A0PJX8 343 aa9.29□□□□□ -0.92
COL6A3-213ENST00000493475 MEX3AA1L020 520 aaKnown RBP9.29□□□□□ -0.92
COL6A3-213ENST00000493475 FAM90A22PA8MWA6 464 aa9.29□□□□□ -0.92
COL6A3-213ENST00000493475 MAGEB4O15481 346 aaPredicted RBP9.29□□□□□ -0.92
COL6A3-213ENST00000493475 OR2F2O95006 317 aa9.29□□□□□ -0.92
COL6A3-213ENST00000493475 CDK2P24941 298 aa9.29□□□□□ -0.92
COL6A3-213ENST00000493475 SLC6A1P30531 599 aa9.29□□□□□ -0.92
COL6A3-213ENST00000493475 BLCAPP62952 87 aa9.29□□□□□ -0.92
COL6A3-213ENST00000493475 CD83Q01151 205 aa9.29□□□□□ -0.92
COL6A3-213ENST00000493475 FOXB2Q5VYV0 432 aa9.29□□□□□ -0.92
COL6A3-213ENST00000493475 KDM4DQ6B0I6 523 aa9.29□□□□□ -0.92
COL6A3-213ENST00000493475 CCDC121Q6ZUS5 278 aa9.29□□□□□ -0.92
COL6A3-213ENST00000493475 BCDIN3DQ7Z5W3 292 aaKnown RBP9.29□□□□□ -0.92
COL6A3-213ENST00000493475 ZNF565Q8N9K5 539 aa9.29□□□□□ -0.92
COL6A3-213ENST00000493475 WFDC9Q8NEX5 89 aa9.29□□□□□ -0.92
COL6A3-213ENST00000493475 TRUB1Q8WWH5 349 aaKnown RBP9.29□□□□□ -0.92
COL6A3-213ENST00000493475 UTP4Q969X6 686 aaKnown RBP9.29□□□□□ -0.92
COL6A3-213ENST00000493475 OPALINQ96PE5 141 aa9.29□□□□□ -0.92
COL6A3-213ENST00000493475 MCRIP2Q9BUT9 160 aaKnown RBP9.29□□□□□ -0.92
COL6A3-213ENST00000493475 GABARAPL1Q9H0R8 117 aa9.29□□□□□ -0.92
COL6A3-213ENST00000493475 RBFOX1Q9NWB1 397 aaKnown RBP9.29□□□□□ -0.92
COL6A3-213ENST00000493475 HHLA2Q9UM44 414 aa9.29□□□□□ -0.92
COL6A3-213ENST00000493475 GSTK1Q9Y2Q3 226 aa9.29□□□□□ -0.92
COL6A3-213ENST00000493475 H3BSH0 61 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 M0R129 80 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 SIRPB1O00241 398 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 MAGEB3O15480 346 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 ENTPD6O75354 484 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 MPIG6BO95866 241 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 IGHA1P01876 353 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 ISG15P05161 165 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 HTR1AP08908 422 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 DBTP11182 482 aaKnown RBP9.28□□□□□ -0.92
COL6A3-213ENST00000493475 ATF1P18846 271 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 BCL3P20749 454 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 SNU13P55769 128 aaKnown RBP9.28□□□□□ -0.92
COL6A3-213ENST00000493475 EFNB1P98172 346 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 PDZK1IP1Q13113 114 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 ABCA11PQ4W5N1 156 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 C9orf152Q5JTZ5 239 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 KRBOX4Q5JUW0 171 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 VAX1Q5SQQ9 334 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 C1orf146Q5VVC0 180 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 UNQ9370/PRO34162Q6UXP9 181 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 SAXO1Q8IYX7 474 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 TPRX1Q8N7U7 411 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 OR4P4Q8NGL7 312 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 OR13C3Q8NGS6 347 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 RPEQ96AT9 228 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 RBM14Q96PK6 669 aaKnown RBP9.28□□□□□ -0.92
COL6A3-213ENST00000493475 RIBC2Q9H4K1 309 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 HMG20AQ9NP66 347 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 AP4S1Q9Y587 144 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 PLXNB1O43157 2135 aa9.28□□□□□ -0.92
COL6A3-213ENST00000493475 IGKV1-27A0A075B6S5 117 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 DAPL1A0PJW8 107 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 ZNF729A6NN14 1252 aaPredicted RBP9.27□□□□□ -0.93
COL6A3-213ENST00000493475 F8VVB4 439 aa9.27□□□□□ -0.93
COL6A3-213ENST00000493475 F8VWA3 439 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms