RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 RPL4P36578 427 aaKnown RBP2.29□□□□□ -2.04
PTCD3-218ENST00000493430 PEX19P40855 299 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 PMELP40967 661 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 GPR6P46095 362 aaPredicted RBP2.29□□□□□ -2.04
PTCD3-218ENST00000493430 OMPP47874 163 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 CEBPDP49716 269 aaPredicted RBP2.29□□□□□ -2.04
PTCD3-218ENST00000493430 PPP1CBP62140 327 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 LOXL1Q08397 574 aaPredicted RBP2.29□□□□□ -2.04
PTCD3-218ENST00000493430 MZT1Q08AG7 82 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 KLRD1Q13241 179 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 GNA13Q14344 377 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 ZMYND11Q15326 602 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 MPPED2Q15777 294 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 ZSWIM7Q19AV6 140 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 RSPO1Q2MKA7 263 aaPredicted RBP2.29□□□□□ -2.04
PTCD3-218ENST00000493430 IFI44LQ53G44 452 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 KLF17Q5JT82 389 aaPredicted RBP2.29□□□□□ -2.04
PTCD3-218ENST00000493430 TMEM236Q5W0B7 351 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 DMKNQ6E0U4 476 aaPredicted RBP2.29□□□□□ -2.04
PTCD3-218ENST00000493430 OR4A47Q6IF82 309 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 ETFRF1Q6IPR1 90 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF544Q6NX49 715 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 METAP1DQ6UB28 335 aaPredicted RBP2.29□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF730Q6ZMV8 503 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 ZBTB49Q6ZSB9 765 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 CCDC80Q76M96 950 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 FAM122BQ7Z309 247 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 DEFB107AQ8IZN7 70 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 OFCC1Q8IZS5 231 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 C17orf78Q8N4C9 275 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 NATD1Q8N6N6 113 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 SIGLECL1Q8N7X8 197 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 DEFB108BQ8NET1 73 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 BBS1Q8NFJ9 593 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 OR2Z1Q8NG97 314 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 FANK1Q8TC84 345 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 MAGEE2Q8TD90 523 aaPredicted RBP2.29□□□□□ -2.04
PTCD3-218ENST00000493430 C11orf40Q8WZ69 217 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 PROX1Q92786 737 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 BPIFA2Q96DR5 249 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 FAM71F1Q96KD3 344 aaPredicted RBP2.29□□□□□ -2.04
PTCD3-218ENST00000493430 NMNAT3Q96T66 252 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 MYCBPQ99417 103 aaPredicted RBP2.29□□□□□ -2.04
PTCD3-218ENST00000493430 KCTD14Q9BQ13 255 aaPredicted RBP2.29□□□□□ -2.04
PTCD3-218ENST00000493430 TMEM43Q9BTV4 400 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 BEX2Q9BXY8 128 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 MRPL13Q9BYD1 178 aaKnown RBP2.29□□□□□ -2.04
PTCD3-218ENST00000493430 OR2H1Q9GZK4 316 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 CACYBPQ9HB71 228 aaKnown RBP2.29□□□□□ -2.04
PTCD3-218ENST00000493430 NGBQ9NPG2 151 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 RPRD1BQ9NQG5 326 aaKnown RBP2.29□□□□□ -2.04
PTCD3-218ENST00000493430 POLE4Q9NR33 117 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 MRPL22Q9NWU5 206 aaKnown RBP2.29□□□□□ -2.04
PTCD3-218ENST00000493430 DNAJC27Q9NZQ0 273 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 ZNF319Q9P2F9 582 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 OPN4Q9UHM6 478 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 FBXL3Q9UKT7 428 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 WDR83OSQ9Y284 106 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 STARD10Q9Y365 291 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 IFT52Q9Y366 437 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 MED31Q9Y3C7 131 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 IER3IP1Q9Y5U9 82 aa2.29□□□□□ -2.04
PTCD3-218ENST00000493430 IGLV1-36A0A0B4J1U3 117 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 TRAV40A0A0B4J280 105 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 A0A1W2PPQ1 181 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 A0A1W2PRG6 482 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 TIMM8AO60220 97 aaPredicted RBP2.28□□□□□ -2.04
PTCD3-218ENST00000493430 SELENOFO60613 162 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 SLC16A7O60669 478 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 SERPINB7O75635 380 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 UBL3O95164 117 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 OR5F1O95221 314 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 IGHV2-5P01817 119 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 IGHG1P01857 330 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 IGHMP01871 453 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 RLN1P04808 185 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 IFNW1P05000 195 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 SERPINA5P05154 406 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 MRPL3P09001 348 aaKnown RBP2.28□□□□□ -2.04
PTCD3-218ENST00000493430 TACSTD2P09758 323 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 SBK2P0C263 348 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 SLC25A16P16260 332 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 PPIBP23284 216 aaKnown RBP2.28□□□□□ -2.04
PTCD3-218ENST00000493430 STOMP27105 288 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 GLRXP35754 106 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 ARR3P36575 388 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 SRP14P37108 136 aaKnown RBP2.28□□□□□ -2.04
PTCD3-218ENST00000493430 NAA10P41227 235 aaPredicted RBP2.28□□□□□ -2.04
PTCD3-218ENST00000493430 PPOXP50336 477 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 GDI2P50395 445 aaKnown RBP2.28□□□□□ -2.04
PTCD3-218ENST00000493430 PRKXP51817 358 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 NDUFV3P56181 108 aaKnown RBP2.28□□□□□ -2.04
PTCD3-218ENST00000493430 KLF3P57682 345 aaPredicted RBP2.28□□□□□ -2.04
PTCD3-218ENST00000493430 RPL27P61353 136 aaKnown RBP2.28□□□□□ -2.04
PTCD3-218ENST00000493430 SELENOWP63302 87 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 HTD2P86397 168 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 GALK2Q01415 458 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 TGFBR3Q03167 851 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 PRKCDQ05655 676 aa2.28□□□□□ -2.04
PTCD3-218ENST00000493430 CHRNB3Q05901 458 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms