RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 ZNF442Q9H7R0 627 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 FAM49BQ9NUQ9 324 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 DMAC2Q9NW81 257 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 OR51B2Q9Y5P1 312 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 ZFYVE16Q7Z3T8 1539 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 COL22A1Q8NFW1 1626 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 MYH1P12882 1939 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 ADAMTSL1Q8N6G6 1762 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 WDR62O43379 1518 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 A0A096LPK6 155 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 IGHV2OR16-5A0A0B4J2B6 119 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 ZC3H12DA2A288 527 aaKnown RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 OR5H15A6NDH6 313 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 MSGN1A6NI15 193 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 IFITM5A6NNB3 132 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 M0R1B8 84 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 AIPO00170 330 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 SAP18O00422 153 aaKnown RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 NME4O00746 187 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 HSPB6O14558 160 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 HOXA3O43365 443 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 KCNK2O95069 426 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 CLDN1O95832 211 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 MOSP00540 346 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 RENP00797 406 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 APOA2P02652 100 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 GKN3PP0CG01 181 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 RCC1P18754 421 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 IL12AP29459 219 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 GPR6P46095 362 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 ARPP19P56211 112 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 RAB38P57729 211 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 PPP1CBP62140 327 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 RPS25P62851 125 aaKnown RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 TNFAIP6P98066 277 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 SP4Q02446 784 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 HERPUD1Q15011 391 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 SSX1Q16384 188 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 IAH1Q2TAA2 248 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 RAB6CQ53S08 254 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 MESTQ5EB52 335 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 FHL5Q5TD97 284 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 C1QL3Q5VWW1 255 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 ANKRD34AQ69YU3 496 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 FBXL22Q6P050 247 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 Q6ZRG5 221 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 BHLHA9Q7RTU4 235 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 ARPINQ7Z6K5 226 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 CMTM4Q8IZR5 234 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 C1orf158Q8N1D5 194 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 ZNF664Q8N3J9 261 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 MMGT1Q8N4V1 131 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 ZNF433Q8N7K0 673 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 ACVR1CQ8NER5 493 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 OR4S1Q8NGB4 309 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 OR2G2Q8NGZ5 317 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 OR51Q1Q8NH59 317 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 OR1S1Q8NH92 325 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 FNDC9Q8TBE3 224 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 ZNF675Q8TD23 568 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 FAM151AQ8WW52 585 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 GALNT14Q96FL9 552 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 SEC22AQ96IW7 307 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 BTN2A3PQ96KV6 586 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 MS4A4EQ96PG1 132 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 OR2M4Q96R27 311 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 NRTNQ99748 197 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 ZNF670Q9BS34 389 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 SLC25A33Q9BSK2 321 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 C1QTNF4Q9BXJ3 329 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 OR2J1Q9GZK6 312 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 RAB6CQ9H0N0 254 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 GTSF1LQ9H1H1 148 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 REEP1Q9H902 201 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 EXOSC4Q9NPD3 245 aaKnown RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 SDR39U1Q9NRG7 319 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 LYRM2Q9NU23 88 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 RPS6KB2Q9UBS0 482 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 OARD1Q9Y530 152 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 CAMTA1Q9Y6Y1 1673 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 CITO14578 2027 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 PLCH2O75038 1416 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 TROQ12816 1431 aaPredicted RBP3.54□□□□□ -1.84
BRCA1-220ENST00000492859 N4BP2Q86UW6 1770 aaPredicted RBP3.54□□□□□ -1.84
BRCA1-220ENST00000492859 BCL9LQ86UU0 1499 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 SBF1O95248 1867 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 ATG2AQ2TAZ0 1938 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 BAZ2AQ9UIF9 1905 aaKnown RBP3.54□□□□□ -1.84
BRCA1-220ENST00000492859 FAM236DA0A1B0GTK5 79 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 WDR27A2RRH5 827 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 GAGE12JA6NER3 117 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 OTOL1A6NHN0 477 aaPredicted RBP3.54□□□□□ -1.84
BRCA1-220ENST00000492859 OR5B21A6NL26 309 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 H3BMQ9 156 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 RPL36A-HNRNPH2H7BZ11 118 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 K7EMT4 169 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 GABRPO00591 440 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 CXCL13O43927 109 aa3.54□□□□□ -1.84
BRCA1-220ENST00000492859 EEDO75530 441 aaKnown RBP3.54□□□□□ -1.84
BRCA1-220ENST00000492859 WISP2O76076 250 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms